RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 HRASLS5Q96KN8 279 aa4.75□□□□□ -1.65
UBXN4-206ENST00000470687 CORO1BQ9BR76 489 aa4.75□□□□□ -1.65
UBXN4-206ENST00000470687 WDR18Q9BV38 432 aa4.75□□□□□ -1.65
UBXN4-206ENST00000470687 RBCK1Q9BYM8 510 aa4.75□□□□□ -1.65
UBXN4-206ENST00000470687 FAM53CQ9NYF3 392 aa4.75□□□□□ -1.65
UBXN4-206ENST00000470687 CRIM1Q9NZV1 1036 aa4.75□□□□□ -1.65
UBXN4-206ENST00000470687 WWC3Q9ULE0 1092 aa4.75□□□□□ -1.65
UBXN4-206ENST00000470687 PPP1R9AQ9ULJ8 1098 aa4.75□□□□□ -1.65
UBXN4-206ENST00000470687 AMOTL2Q9Y2J4 779 aa4.75□□□□□ -1.65
UBXN4-206ENST00000470687 B8ZZF3 427 aa4.74□□□□□ -1.65
UBXN4-206ENST00000470687 GRIA4P48058 902 aa4.74□□□□□ -1.65
UBXN4-206ENST00000470687 ORC1Q13415 861 aa4.74□□□□□ -1.65
UBXN4-206ENST00000470687 AOC3Q16853 763 aa4.74□□□□□ -1.65
UBXN4-206ENST00000470687 ANGEL2Q5VTE6 544 aaKnown RBP4.74□□□□□ -1.65
UBXN4-206ENST00000470687 SLC23A3Q6PIS1 610 aa4.74□□□□□ -1.65
UBXN4-206ENST00000470687 CCNJLQ8IV13 435 aa4.74□□□□□ -1.65
UBXN4-206ENST00000470687 ZSCAN18Q8TBC5 510 aaPredicted RBP4.74□□□□□ -1.65
UBXN4-206ENST00000470687 MKNK2Q9HBH9 465 aa4.74□□□□□ -1.65
UBXN4-206ENST00000470687 SYNGAP1Q96PV0 1343 aa4.73□□□□□ -1.65
UBXN4-206ENST00000470687 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.73□□□□□ -1.65
UBXN4-206ENST00000470687 TREHO43280 583 aa4.73□□□□□ -1.65
UBXN4-206ENST00000470687 B3GALT4O96024 378 aa4.73□□□□□ -1.65
UBXN4-206ENST00000470687 CEACAM5P06731 702 aa4.73□□□□□ -1.65
UBXN4-206ENST00000470687 OXCT1P55809 520 aa4.73□□□□□ -1.65
UBXN4-206ENST00000470687 KCNMB1Q16558 191 aa4.73□□□□□ -1.65
UBXN4-206ENST00000470687 SPRED3Q2MJR0 410 aa4.73□□□□□ -1.65
UBXN4-206ENST00000470687 SIAH1Q8IUQ4 282 aa4.73□□□□□ -1.65
UBXN4-206ENST00000470687 PPP1R16BQ96T49 567 aa4.73□□□□□ -1.65
UBXN4-206ENST00000470687 TCF12Q99081 682 aa4.73□□□□□ -1.65
UBXN4-206ENST00000470687 LMCD1Q9NZU5 365 aa4.73□□□□□ -1.65
UBXN4-206ENST00000470687 PLAGL2Q9UPG8 496 aa4.73□□□□□ -1.65
UBXN4-206ENST00000470687 TMEM265A0A087WTH1 108 aa4.72□□□□□ -1.65
UBXN4-206ENST00000470687 UNCXA6NJT0 531 aa4.72□□□□□ -1.65
UBXN4-206ENST00000470687 TMPRSS2O15393 492 aa4.72□□□□□ -1.65
UBXN4-206ENST00000470687 FAM13AO94988 1023 aa4.72□□□□□ -1.65
UBXN4-206ENST00000470687 ZSCAN22P10073 491 aaPredicted RBP4.72□□□□□ -1.65
UBXN4-206ENST00000470687 BUD31P41223 144 aaPredicted RBP4.72□□□□□ -1.65
UBXN4-206ENST00000470687 MFAP1P55081 439 aaKnown RBP4.72□□□□□ -1.65
UBXN4-206ENST00000470687 FMR1Q06787 632 aaKnown RBP eCLIP4.72□□□□□ -1.65
UBXN4-206ENST00000470687 EHHADHQ08426 723 aa4.72□□□□□ -1.65
UBXN4-206ENST00000470687 PDE3AQ14432 1141 aa4.72□□□□□ -1.65
UBXN4-206ENST00000470687 PI16Q6UXB8 463 aa4.72□□□□□ -1.65
UBXN4-206ENST00000470687 TTLL10Q6ZVT0 673 aa4.72□□□□□ -1.65
UBXN4-206ENST00000470687 GLYCTKQ8IVS8 523 aa4.72□□□□□ -1.65
UBXN4-206ENST00000470687 LIN37Q96GY3 246 aaPredicted RBP4.72□□□□□ -1.65
UBXN4-206ENST00000470687 LIN7BQ9HAP6 207 aa4.72□□□□□ -1.65
UBXN4-206ENST00000470687 ZFYVE28Q9HCC9 887 aa4.72□□□□□ -1.65
UBXN4-206ENST00000470687 PRDM7Q9NQW5 492 aa4.72□□□□□ -1.65
UBXN4-206ENST00000470687 RAPGEFL1Q9UHV5 662 aa4.72□□□□□ -1.65
UBXN4-206ENST00000470687 MTMR7Q9Y216 660 aa4.72□□□□□ -1.65
UBXN4-206ENST00000470687 A0A1W2PP55 124 aa4.71□□□□□ -1.66
UBXN4-206ENST00000470687 LEFTY1O75610 366 aa4.71□□□□□ -1.66
UBXN4-206ENST00000470687 POLR3DP05423 398 aaPredicted RBP4.71□□□□□ -1.66
UBXN4-206ENST00000470687 P4HBP07237 508 aaKnown RBP4.71□□□□□ -1.66
UBXN4-206ENST00000470687 ALKBH2Q6NS38 261 aa4.71□□□□□ -1.66
UBXN4-206ENST00000470687 ANKLE2Q86XL3 938 aa4.71□□□□□ -1.66
UBXN4-206ENST00000470687 DDX54Q8TDD1 881 aaKnown RBP4.71□□□□□ -1.66
UBXN4-206ENST00000470687 ASB16Q96NS5 453 aa4.71□□□□□ -1.66
UBXN4-206ENST00000470687 PIDD1Q9HB75 910 aa4.71□□□□□ -1.66
UBXN4-206ENST00000470687 DCTN4Q9UJW0 460 aa4.71□□□□□ -1.66
UBXN4-206ENST00000470687 USP5P45974 858 aa4.7□□□□□ -1.66
UBXN4-206ENST00000470687 PDE4CQ08493 712 aa4.7□□□□□ -1.66
UBXN4-206ENST00000470687 B4GALNT3Q6L9W6 998 aa4.7□□□□□ -1.66
UBXN4-206ENST00000470687 ARHGAP27Q6ZUM4 889 aa4.7□□□□□ -1.66
UBXN4-206ENST00000470687 SYDE1Q6ZW31 735 aaPredicted RBP4.7□□□□□ -1.66
UBXN4-206ENST00000470687 SMYD4Q8IYR2 804 aaPredicted RBP4.7□□□□□ -1.66
UBXN4-206ENST00000470687 ALKBH8Q96BT7 664 aaKnown RBP4.7□□□□□ -1.66
UBXN4-206ENST00000470687 FANCD2OSQ96PS1 177 aa4.7□□□□□ -1.66
UBXN4-206ENST00000470687 DUSP23Q9BVJ7 150 aa4.7□□□□□ -1.66
UBXN4-206ENST00000470687 NIF3L1Q9GZT8 377 aa4.7□□□□□ -1.66
UBXN4-206ENST00000470687 TNKS2Q9H2K2 1166 aa4.7□□□□□ -1.66
UBXN4-206ENST00000470687 ATXN3LQ9H3M9 355 aa4.7□□□□□ -1.66
UBXN4-206ENST00000470687 ZNF576Q9H609 170 aa4.7□□□□□ -1.66
UBXN4-206ENST00000470687 CTNND2Q9UQB3 1225 aa4.7□□□□□ -1.66
UBXN4-206ENST00000470687 ANKRD33BA6NCL7 494 aa4.69□□□□□ -1.66
UBXN4-206ENST00000470687 KRT1P04264 644 aa4.69□□□□□ -1.66
UBXN4-206ENST00000470687 LIG1P18858 919 aa4.69□□□□□ -1.66
UBXN4-206ENST00000470687 ITIH2P19823 946 aa4.69□□□□□ -1.66
UBXN4-206ENST00000470687 AP3B2Q13367 1082 aa4.69□□□□□ -1.66
UBXN4-206ENST00000470687 FYB2Q5VWT5 728 aa4.69□□□□□ -1.66
UBXN4-206ENST00000470687 GALNT12Q8IXK2 581 aa4.69□□□□□ -1.66
UBXN4-206ENST00000470687 WDR89Q96FK6 387 aaPredicted RBP4.69□□□□□ -1.66
UBXN4-206ENST00000470687 PODXL2Q9NZ53 605 aa4.69□□□□□ -1.66
UBXN4-206ENST00000470687 SNX11Q9Y5W9 270 aa4.69□□□□□ -1.66
UBXN4-206ENST00000470687 C1QTNF9P0C862 333 aa4.68□□□□□ -1.66
UBXN4-206ENST00000470687 ID3Q02535 119 aa4.68□□□□□ -1.66
UBXN4-206ENST00000470687 PRR23BQ6ZRT6 265 aa4.68□□□□□ -1.66
UBXN4-206ENST00000470687 CCDC86Q9H6F5 360 aaKnown RBP4.68□□□□□ -1.66
UBXN4-206ENST00000470687 DISC1Q9NRI5 854 aa4.68□□□□□ -1.66
UBXN4-206ENST00000470687 KIAA1522Q9P206 1035 aaPredicted RBP4.68□□□□□ -1.66
UBXN4-206ENST00000470687 PCDHGC5Q9Y5F6 944 aa4.68□□□□□ -1.66
UBXN4-206ENST00000470687 GLI1P08151 1106 aa4.67□□□□□ -1.66
UBXN4-206ENST00000470687 ITPKAP23677 461 aa4.67□□□□□ -1.66
UBXN4-206ENST00000470687 MAPK1P28482 360 aa4.67□□□□□ -1.66
UBXN4-206ENST00000470687 ZP2Q05996 745 aa4.67□□□□□ -1.66
UBXN4-206ENST00000470687 IKZF1Q13422 519 aa4.67□□□□□ -1.66
UBXN4-206ENST00000470687 AAMPQ13685 434 aa4.67□□□□□ -1.66
UBXN4-206ENST00000470687 TTLL4Q14679 1199 aa4.67□□□□□ -1.66
UBXN4-206ENST00000470687 AMIGO3Q86WK7 504 aa4.67□□□□□ -1.66
UBXN4-206ENST00000470687 ASB11Q8WXH4 323 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms