RNA–Protein interactions for RNA: ENST00000470588.1

SMARCD3-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 1,755 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-206ENST00000470588 PPARAQ07869 468 aa19.79■□□□□ 0.76
SMARCD3-206ENST00000470588 SPTY2D1Q68D10 685 aaPredicted RBP19.79■□□□□ 0.76
SMARCD3-206ENST00000470588 APOA5Q6Q788 366 aa19.79■□□□□ 0.76
SMARCD3-206ENST00000470588 C15orf52Q6ZUT6 534 aaKnown RBP19.79■□□□□ 0.76
SMARCD3-206ENST00000470588 SP8Q8IXZ3 490 aa19.79■□□□□ 0.76
SMARCD3-206ENST00000470588 TMTC2Q8N394 836 aa19.79■□□□□ 0.76
SMARCD3-206ENST00000470588 NSUN4Q96CB9 384 aaKnown RBP19.79■□□□□ 0.76
SMARCD3-206ENST00000470588 INCENPQ9NQS7 918 aa19.79■□□□□ 0.76
SMARCD3-206ENST00000470588 TACC3Q9Y6A5 838 aa19.79■□□□□ 0.76
SMARCD3-206ENST00000470588 TIAM2Q8IVF5 1701 aa19.79■□□□□ 0.76
SMARCD3-206ENST00000470588 ZBTB43O43298 467 aa19.78■□□□□ 0.76
SMARCD3-206ENST00000470588 NFXL1Q6ZNB6 911 aa19.78■□□□□ 0.76
SMARCD3-206ENST00000470588 C8orf76Q96K31 380 aa19.78■□□□□ 0.76
SMARCD3-206ENST00000470588 PODXL2Q9NZ53 605 aa19.78■□□□□ 0.76
SMARCD3-206ENST00000470588 RCOR1Q9UKL0 485 aa19.78■□□□□ 0.76
SMARCD3-206ENST00000470588 SART3Q15020 963 aaKnown RBP19.78■□□□□ 0.76
SMARCD3-206ENST00000470588 SYNE3Q6ZMZ3 975 aa19.78■□□□□ 0.76
SMARCD3-206ENST00000470588 CACNA1SQ13698 1873 aa19.77■□□□□ 0.76
SMARCD3-206ENST00000470588 MECOMQ03112 1051 aa19.77■□□□□ 0.76
SMARCD3-206ENST00000470588 FBXO18Q8NFZ0 1043 aa19.77■□□□□ 0.76
SMARCD3-206ENST00000470588 ZNF384Q8TF68 577 aa19.77■□□□□ 0.76
SMARCD3-206ENST00000470588 ATP6V0A2Q9Y487 856 aa19.77■□□□□ 0.76
SMARCD3-206ENST00000470588 MAST2Q6P0Q8 1798 aa19.77■□□□□ 0.75
SMARCD3-206ENST00000470588 CCDC69A6NI79 296 aa19.76■□□□□ 0.75
SMARCD3-206ENST00000470588 H0YIN7 160 aa19.76■□□□□ 0.75
SMARCD3-206ENST00000470588 PCP11498 1178 aaKnown RBP19.76■□□□□ 0.75
SMARCD3-206ENST00000470588 FOSBP53539 338 aa19.76■□□□□ 0.75
SMARCD3-206ENST00000470588 DYNLL1P63167 89 aaKnown RBP19.76■□□□□ 0.75
SMARCD3-206ENST00000470588 TPRNQ4KMQ1 711 aa19.76■□□□□ 0.75
SMARCD3-206ENST00000470588 C2CD5Q86YS7 1000 aa19.76■□□□□ 0.75
SMARCD3-206ENST00000470588 SLC16A10Q8TF71 515 aa19.76■□□□□ 0.75
SMARCD3-206ENST00000470588 SDR42E1Q8WUS8 393 aa19.76■□□□□ 0.75
SMARCD3-206ENST00000470588 SLC12A7Q9Y666 1083 aa19.76■□□□□ 0.75
SMARCD3-206ENST00000470588 CHAF1AQ13111 956 aaPredicted RBP19.75■□□□□ 0.75
SMARCD3-206ENST00000470588 TXNRD3Q86VQ6 643 aa19.75■□□□□ 0.75
SMARCD3-206ENST00000470588 RAB11FIP4Q86YS3 637 aa19.75■□□□□ 0.75
SMARCD3-206ENST00000470588 WDR66Q8TBY9 1149 aa19.75■□□□□ 0.75
SMARCD3-206ENST00000470588 DUOX1Q9NRD9 1551 aa19.75■□□□□ 0.75
SMARCD3-206ENST00000470588 CCDC88AQ3V6T2 1871 aa19.75■□□□□ 0.75
SMARCD3-206ENST00000470588 ERICH2A1L162 156 aa19.75■□□□□ 0.75
SMARCD3-206ENST00000470588 MINDY4BA8MYZ0 360 aa19.75■□□□□ 0.75
SMARCD3-206ENST00000470588 GUCY1B3Q02153 619 aa19.75■□□□□ 0.75
SMARCD3-206ENST00000470588 UVSSAQ2YD98 709 aa19.75■□□□□ 0.75
SMARCD3-206ENST00000470588 RRP12Q5JTH9 1297 aaKnown RBP19.75■□□□□ 0.75
SMARCD3-206ENST00000470588 STYK1Q6J9G0 422 aa19.75■□□□□ 0.75
SMARCD3-206ENST00000470588 FAM43AQ8N2R8 423 aa19.75■□□□□ 0.75
SMARCD3-206ENST00000470588 TDRD7Q8NHU6 1098 aaKnown RBP19.75■□□□□ 0.75
SMARCD3-206ENST00000470588 ZNF622Q969S3 477 aaKnown RBP eCLIP19.75■□□□□ 0.75
SMARCD3-206ENST00000470588 PGBD1Q96JS3 809 aa19.75■□□□□ 0.75
SMARCD3-206ENST00000470588 SENP2Q9HC62 589 aa19.75■□□□□ 0.75
SMARCD3-206ENST00000470588 TOMM22Q9NS69 142 aa19.75■□□□□ 0.75
SMARCD3-206ENST00000470588 CHD4Q14839 1912 aa19.74■□□□□ 0.75
SMARCD3-206ENST00000470588 GOLGA8AA7E2F4 631 aa19.74■□□□□ 0.75
SMARCD3-206ENST00000470588 C6orf229H3BNL8 230 aa19.74■□□□□ 0.75
SMARCD3-206ENST00000470588 RCAN1P53805 252 aa19.74■□□□□ 0.75
SMARCD3-206ENST00000470588 WTAPQ15007 396 aa19.74■□□□□ 0.75
SMARCD3-206ENST00000470588 ESR2Q92731 530 aa19.74■□□□□ 0.75
SMARCD3-206ENST00000470588 CRNKL1Q9BZJ0 848 aaKnown RBP19.74■□□□□ 0.75
SMARCD3-206ENST00000470588 DDX19AQ9NUU7 478 aaKnown RBP19.74■□□□□ 0.75
SMARCD3-206ENST00000470588 PPFIA3O75145 1194 aa19.73■□□□□ 0.75
SMARCD3-206ENST00000470588 FGRP09769 529 aa19.73■□□□□ 0.75
SMARCD3-206ENST00000470588 LIG1P18858 919 aa19.73■□□□□ 0.75
SMARCD3-206ENST00000470588 CDC27P30260 824 aa19.73■□□□□ 0.75
SMARCD3-206ENST00000470588 BRAPQ7Z569 592 aa19.73■□□□□ 0.75
SMARCD3-206ENST00000470588 ATP8A2Q9NTI2 1148 aa19.73■□□□□ 0.75
SMARCD3-206ENST00000470588 FAM217BQ9NTX9 383 aaPredicted RBP19.73■□□□□ 0.75
SMARCD3-206ENST00000470588 LTBP1Q14766 1721 aa19.73■□□□□ 0.75
SMARCD3-206ENST00000470588 NID2Q14112 1375 aa19.73■□□□□ 0.75
SMARCD3-206ENST00000470588 NTRK3Q16288 839 aa19.72■□□□□ 0.75
SMARCD3-206ENST00000470588 TBC1D16Q8TBP0 767 aa19.72■□□□□ 0.75
SMARCD3-206ENST00000470588 IARSP41252 1262 aaKnown RBP19.72■□□□□ 0.75
SMARCD3-206ENST00000470588 ILDR1Q86SU0 546 aaPredicted RBP19.72■□□□□ 0.75
SMARCD3-206ENST00000470588 MICU3Q86XE3 530 aa19.72■□□□□ 0.75
SMARCD3-206ENST00000470588 TRIM44Q96DX7 344 aaPredicted RBP19.72■□□□□ 0.75
SMARCD3-206ENST00000470588 USP28Q96RU2 1077 aa19.72■□□□□ 0.75
SMARCD3-206ENST00000470588 ALG1Q9BT22 464 aa19.72■□□□□ 0.75
SMARCD3-206ENST00000470588 RTEL1Q9NZ71 1219 aa19.72■□□□□ 0.75
SMARCD3-206ENST00000470588 GSTO1P78417 241 aa19.71■□□□□ 0.75
SMARCD3-206ENST00000470588 SSRP1Q08945 709 aaKnown RBP19.71■□□□□ 0.75
SMARCD3-206ENST00000470588 PPP2R5BQ15173 497 aa19.71■□□□□ 0.75
SMARCD3-206ENST00000470588 CTR9Q6PD62 1173 aa19.71■□□□□ 0.75
SMARCD3-206ENST00000470588 MPNDQ8N594 471 aa19.71■□□□□ 0.75
SMARCD3-206ENST00000470588 CNKSR1Q969H4 720 aa19.71■□□□□ 0.75
SMARCD3-206ENST00000470588 UBAC1Q9BSL1 405 aa19.71■□□□□ 0.75
SMARCD3-206ENST00000470588 FUCA2Q9BTY2 467 aa19.71■□□□□ 0.75
SMARCD3-206ENST00000470588 NUP62CLQ9H1M0 184 aa19.71■□□□□ 0.75
SMARCD3-206ENST00000470588 STK36Q9NRP7 1315 aa19.71■□□□□ 0.75
SMARCD3-206ENST00000470588 CCDC196A0A1B0GTZ2 297 aa19.7■□□□□ 0.74
SMARCD3-206ENST00000470588 IFNAR1P17181 557 aa19.7■□□□□ 0.74
SMARCD3-206ENST00000470588 PRDX5P30044 214 aa19.7■□□□□ 0.74
SMARCD3-206ENST00000470588 SBK1Q52WX2 424 aa19.7■□□□□ 0.74
SMARCD3-206ENST00000470588 OTUD7BQ6GQQ9 843 aa19.7■□□□□ 0.74
SMARCD3-206ENST00000470588 DPP8Q6V1X1 898 aaPredicted RBP19.7■□□□□ 0.74
SMARCD3-206ENST00000470588 BICD2Q8TD16 824 aa19.7■□□□□ 0.74
SMARCD3-206ENST00000470588 WASF1Q92558 559 aa19.7■□□□□ 0.74
SMARCD3-206ENST00000470588 MYH15Q9Y2K3 1946 aa19.7■□□□□ 0.74
SMARCD3-206ENST00000470588 LDHBP07195 334 aaKnown RBP19.7■□□□□ 0.74
SMARCD3-206ENST00000470588 RXRAP19793 462 aa19.7■□□□□ 0.74
SMARCD3-206ENST00000470588 MAP3K11Q16584 847 aa19.7■□□□□ 0.74
SMARCD3-206ENST00000470588 DZIP1Q86YF9 867 aaKnown RBP19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms