RNA–Protein interactions for RNA: ENST00000469930.1

BRAF-202, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene BRAF, Length 1,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-202ENST00000469930 FAM198AQ9UFP1 575 aa24.84■■□□□ 1.57
BRAF-202ENST00000469930 FLT1P17948 1338 aa24.84■■□□□ 1.57
BRAF-202ENST00000469930 TNFAIP1Q13829 316 aa24.83■■□□□ 1.57
BRAF-202ENST00000469930 NECTIN1Q15223 517 aa24.83■■□□□ 1.57
BRAF-202ENST00000469930 APPP05067 770 aa24.82■■□□□ 1.56
BRAF-202ENST00000469930 NFIAQ12857 509 aa24.82■■□□□ 1.56
BRAF-202ENST00000469930 APOBEC3FQ8IUX4 373 aaKnown RBP24.82■■□□□ 1.56
BRAF-202ENST00000469930 FAM151AQ8WW52 585 aa24.82■■□□□ 1.56
BRAF-202ENST00000469930 KCNB2Q92953 911 aa24.82■■□□□ 1.56
BRAF-202ENST00000469930 OSBPL5Q9H0X9 879 aaPredicted RBP24.82■■□□□ 1.56
BRAF-202ENST00000469930 DDX4Q9NQI0 724 aaKnown RBP24.82■■□□□ 1.56
BRAF-202ENST00000469930 ATRNL1Q5VV63 1379 aa24.81■■□□□ 1.56
BRAF-202ENST00000469930 TNNI2P48788 182 aa24.81■■□□□ 1.56
BRAF-202ENST00000469930 NAPBQ9H115 298 aa24.81■■□□□ 1.56
BRAF-202ENST00000469930 DHX36Q9H2U1 1008 aaKnown RBP24.81■■□□□ 1.56
BRAF-202ENST00000469930 ARPP21Q9UBL0 812 aaPredicted RBP24.81■■□□□ 1.56
BRAF-202ENST00000469930 ANAPC4Q9UJX5 808 aa24.81■■□□□ 1.56
BRAF-202ENST00000469930 RBM8AQ9Y5S9 174 aaKnown RBP24.81■■□□□ 1.56
BRAF-202ENST00000469930 DDX60LQ5H9U9 1706 aaKnown RBP24.81■■□□□ 1.56
BRAF-202ENST00000469930 CLRN2A0PK11 232 aa24.8■■□□□ 1.56
BRAF-202ENST00000469930 HSPA4P34932 840 aa24.8■■□□□ 1.56
BRAF-202ENST00000469930 MAPKAPK5Q8IW41 473 aa24.8■■□□□ 1.56
BRAF-202ENST00000469930 RRAGCQ9HB90 399 aa24.8■■□□□ 1.56
BRAF-202ENST00000469930 PPP2R3BQ9Y5P8 575 aa24.8■■□□□ 1.56
BRAF-202ENST00000469930 CNTNAP1P78357 1384 aa24.8■■□□□ 1.56
BRAF-202ENST00000469930 TDO2P48775 406 aa24.79■■□□□ 1.56
BRAF-202ENST00000469930 TSGA10IPQ3SY00 556 aa24.79■■□□□ 1.56
BRAF-202ENST00000469930 CTR9Q6PD62 1173 aa24.79■■□□□ 1.56
BRAF-202ENST00000469930 IL17RAQ96F46 866 aa24.79■■□□□ 1.56
BRAF-202ENST00000469930 USP17L12C9JPN9 530 aa24.78■■□□□ 1.56
BRAF-202ENST00000469930 USP17L21D6R901 530 aa24.78■■□□□ 1.56
BRAF-202ENST00000469930 C12orf60Q5U649 245 aa24.78■■□□□ 1.56
BRAF-202ENST00000469930 ANGEL2Q5VTE6 544 aaKnown RBP24.78■■□□□ 1.56
BRAF-202ENST00000469930 TTC6Q86TZ1 520 aa24.78■■□□□ 1.56
BRAF-202ENST00000469930 AMOTL1Q8IY63 956 aa24.78■■□□□ 1.56
BRAF-202ENST00000469930 UPF2Q9HAU5 1272 aaKnown RBP24.78■■□□□ 1.56
BRAF-202ENST00000469930 MCM9Q9NXL9 1143 aa24.78■■□□□ 1.56
BRAF-202ENST00000469930 NAV1Q8NEY1 1877 aa24.78■■□□□ 1.56
BRAF-202ENST00000469930 CACNB3P54284 484 aa24.77■■□□□ 1.56
BRAF-202ENST00000469930 IMMTQ16891 758 aaKnown RBP24.77■■□□□ 1.56
BRAF-202ENST00000469930 RNF20Q5VTR2 975 aa24.77■■□□□ 1.56
BRAF-202ENST00000469930 METTL16Q86W50 562 aaKnown RBP24.77■■□□□ 1.56
BRAF-202ENST00000469930 VEZTQ9HBM0 779 aa24.77■■□□□ 1.56
BRAF-202ENST00000469930 ASTN2O75129 1339 aaPredicted RBP24.77■■□□□ 1.56
BRAF-202ENST00000469930 TCP10L2B9ZVM9 353 aa24.76■■□□□ 1.55
BRAF-202ENST00000469930 PCP11498 1178 aaKnown RBP24.76■■□□□ 1.55
BRAF-202ENST00000469930 MCCP23508 829 aa24.76■■□□□ 1.55
BRAF-202ENST00000469930 NT5C2P49902 561 aa24.76■■□□□ 1.55
BRAF-202ENST00000469930 PICALMQ13492 652 aa24.76■■□□□ 1.55
BRAF-202ENST00000469930 DCPSQ96C86 337 aaKnown RBP24.76■■□□□ 1.55
BRAF-202ENST00000469930 EHD4Q9H223 541 aa24.76■■□□□ 1.55
BRAF-202ENST00000469930 GGA3Q9NZ52 723 aa24.76■■□□□ 1.55
BRAF-202ENST00000469930 ROBO3Q96MS0 1386 aa24.76■■□□□ 1.55
BRAF-202ENST00000469930 MYH1P12882 1939 aa24.75■■□□□ 1.55
BRAF-202ENST00000469930 ZNF213O14771 459 aa24.75■■□□□ 1.55
BRAF-202ENST00000469930 FGRP09769 529 aa24.75■■□□□ 1.55
BRAF-202ENST00000469930 RBM25P49756 843 aaKnown RBP24.75■■□□□ 1.55
BRAF-202ENST00000469930 ANAPC15P60006 121 aa24.75■■□□□ 1.55
BRAF-202ENST00000469930 RASA3Q14644 834 aa24.75■■□□□ 1.55
BRAF-202ENST00000469930 CREB3L3Q68CJ9 461 aa24.75■■□□□ 1.55
BRAF-202ENST00000469930 FOXP4Q8IVH2 680 aaPredicted RBP24.75■■□□□ 1.55
BRAF-202ENST00000469930 ZFPM1Q8IX07 1006 aa24.75■■□□□ 1.55
BRAF-202ENST00000469930 SLC27A2O14975 620 aa24.74■■□□□ 1.55
BRAF-202ENST00000469930 POLR3DP05423 398 aaPredicted RBP24.74■■□□□ 1.55
BRAF-202ENST00000469930 CYP21A2P08686 494 aa24.74■■□□□ 1.55
BRAF-202ENST00000469930 YY1P25490 414 aa24.74■■□□□ 1.55
BRAF-202ENST00000469930 MAP3K10Q02779 954 aa24.74■■□□□ 1.55
BRAF-202ENST00000469930 PPARAQ07869 468 aa24.74■■□□□ 1.55
BRAF-202ENST00000469930 SH3BP5LQ7L8J4 393 aa24.74■■□□□ 1.55
BRAF-202ENST00000469930 LDHDQ86WU2 507 aa24.74■■□□□ 1.55
BRAF-202ENST00000469930 DEFB129Q9H1M3 183 aa24.74■■□□□ 1.55
BRAF-202ENST00000469930 NMRK2Q9NPI5 230 aa24.74■■□□□ 1.55
BRAF-202ENST00000469930 PI4KBQ9UBF8 816 aa24.74■■□□□ 1.55
BRAF-202ENST00000469930 PALD1Q9ULE6 856 aa24.74■■□□□ 1.55
BRAF-202ENST00000469930 LAMA4Q16363 1823 aa24.74■■□□□ 1.55
BRAF-202ENST00000469930 BAZ2AQ9UIF9 1905 aaKnown RBP24.74■■□□□ 1.55
BRAF-202ENST00000469930 HLA-DOAP06340 250 aa24.73■■□□□ 1.55
BRAF-202ENST00000469930 TCP10Q12799 353 aa24.73■■□□□ 1.55
BRAF-202ENST00000469930 TEPSINQ96N21 525 aa24.73■■□□□ 1.55
BRAF-202ENST00000469930 DDTLA6NHG4 134 aaPredicted RBP24.72■■□□□ 1.55
BRAF-202ENST00000469930 TBC1D12O60347 775 aa24.72■■□□□ 1.55
BRAF-202ENST00000469930 SLC3A2P08195 630 aaKnown RBP24.72■■□□□ 1.55
BRAF-202ENST00000469930 GABPAQ06546 454 aa24.72■■□□□ 1.55
BRAF-202ENST00000469930 C22orf23Q9BZE7 217 aa24.72■■□□□ 1.55
BRAF-202ENST00000469930 LAMB1P07942 1786 aa24.72■■□□□ 1.55
BRAF-202ENST00000469930 ZKSCAN1P17029 563 aaPredicted RBP24.71■■□□□ 1.55
BRAF-202ENST00000469930 PLCD1P51178 756 aa24.71■■□□□ 1.55
BRAF-202ENST00000469930 CDC37L1Q7L3B6 337 aa24.71■■□□□ 1.55
BRAF-202ENST00000469930 SULF1Q8IWU6 871 aa24.71■■□□□ 1.55
BRAF-202ENST00000469930 HOOK2Q96ED9 719 aa24.71■■□□□ 1.55
BRAF-202ENST00000469930 RNF41Q9H4P4 317 aaPredicted RBP24.71■■□□□ 1.55
BRAF-202ENST00000469930 SAP30BPQ9UHR5 308 aaKnown RBP24.71■■□□□ 1.55
BRAF-202ENST00000469930 MINDY4BA8MYZ0 360 aa24.7■■□□□ 1.54
BRAF-202ENST00000469930 KRT32Q14532 448 aa24.7■■□□□ 1.54
BRAF-202ENST00000469930 EAPPQ56P03 285 aaPredicted RBP24.7■■□□□ 1.54
BRAF-202ENST00000469930 STAG1Q8WVM7 1258 aa24.7■■□□□ 1.54
BRAF-202ENST00000469930 TBC1D32Q96NH3 1257 aa24.7■■□□□ 1.54
BRAF-202ENST00000469930 TMEM39BQ9GZU3 492 aa24.7■■□□□ 1.54
BRAF-202ENST00000469930 NBPF3Q9H094 633 aa24.7■■□□□ 1.54
BRAF-202ENST00000469930 SWAP70Q9UH65 585 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms