RNA–Protein interactions for RNA: ENST00000469565.6

LMNA-210, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-210ENST00000469565 TEX11Q8IYF3 940 aa16.42■□□□□ 0.22
LMNA-210ENST00000469565 SH3RF3Q8TEJ3 882 aaPredicted RBP16.42■□□□□ 0.22
LMNA-210ENST00000469565 ZC3H15Q8WU90 426 aaKnown RBP16.42■□□□□ 0.22
LMNA-210ENST00000469565 PUS7LQ9H0K6 701 aaKnown RBP16.42■□□□□ 0.22
LMNA-210ENST00000469565 ARMT1Q9H993 441 aa16.42■□□□□ 0.22
LMNA-210ENST00000469565 CDK5RAP2Q96SN8 1893 aa16.42■□□□□ 0.22
LMNA-210ENST00000469565 HIP1O00291 1037 aa16.41■□□□□ 0.22
LMNA-210ENST00000469565 PPP4CP60510 307 aa16.41■□□□□ 0.22
LMNA-210ENST00000469565 TCP10Q12799 353 aa16.41■□□□□ 0.22
LMNA-210ENST00000469565 NMIQ13287 307 aaPredicted RBP16.41■□□□□ 0.22
LMNA-210ENST00000469565 CWC27Q6UX04 472 aaKnown RBP16.41■□□□□ 0.22
LMNA-210ENST00000469565 KRT26Q7Z3Y9 468 aa16.41■□□□□ 0.22
LMNA-210ENST00000469565 SULF1Q8IWU6 871 aa16.41■□□□□ 0.22
LMNA-210ENST00000469565 OSBP2Q969R2 916 aa16.41■□□□□ 0.22
LMNA-210ENST00000469565 SEC62Q99442 399 aaKnown RBP16.41■□□□□ 0.22
LMNA-210ENST00000469565 GLIS2Q9BZE0 524 aaPredicted RBP16.41■□□□□ 0.22
LMNA-210ENST00000469565 ZNF408Q9H9D4 720 aa16.41■□□□□ 0.22
LMNA-210ENST00000469565 M0R2C6 588 aa16.4■□□□□ 0.22
LMNA-210ENST00000469565 USP5P45974 858 aa16.4■□□□□ 0.22
LMNA-210ENST00000469565 RHBDL3P58872 404 aa16.4■□□□□ 0.22
LMNA-210ENST00000469565 NOGQ13253 232 aa16.4■□□□□ 0.22
LMNA-210ENST00000469565 PICALMQ13492 652 aa16.4■□□□□ 0.22
LMNA-210ENST00000469565 ZMYM1Q5SVZ6 1142 aa16.4■□□□□ 0.22
LMNA-210ENST00000469565 USP48Q86UV5 1035 aa16.4■□□□□ 0.22
LMNA-210ENST00000469565 APOBEC3FQ8IUX4 373 aaKnown RBP16.4■□□□□ 0.22
LMNA-210ENST00000469565 LCORLQ8N3X6 602 aa16.4■□□□□ 0.22
LMNA-210ENST00000469565 TGFBRAP1Q8WUH2 860 aa16.4■□□□□ 0.22
LMNA-210ENST00000469565 FAM227BQ96M60 508 aa16.4■□□□□ 0.22
LMNA-210ENST00000469565 PGAP2Q9UHJ9 254 aa16.4■□□□□ 0.22
LMNA-210ENST00000469565 MYH1P12882 1939 aa16.39■□□□□ 0.21
LMNA-210ENST00000469565 TNNI2P48788 182 aa16.39■□□□□ 0.21
LMNA-210ENST00000469565 TNFAIP1Q13829 316 aa16.39■□□□□ 0.21
LMNA-210ENST00000469565 CDC37L1Q7L3B6 337 aa16.39■□□□□ 0.21
LMNA-210ENST00000469565 CERS3Q8IU89 383 aa16.39■□□□□ 0.21
LMNA-210ENST00000469565 RIOK1Q9BRS2 568 aaKnown RBP16.39■□□□□ 0.21
LMNA-210ENST00000469565 CRNKL1Q9BZJ0 848 aaKnown RBP16.39■□□□□ 0.21
LMNA-210ENST00000469565 BAZ2AQ9UIF9 1905 aaKnown RBP16.39■□□□□ 0.21
LMNA-210ENST00000469565 RFX7Q2KHR2 1363 aa16.38■□□□□ 0.21
LMNA-210ENST00000469565 A0A0D9SFI3 127 aa16.38■□□□□ 0.21
LMNA-210ENST00000469565 ADM5C9JUS6 153 aa16.38■□□□□ 0.21
LMNA-210ENST00000469565 TNRC18O15417 2968 aaPredicted RBP16.38■□□□□ 0.21
LMNA-210ENST00000469565 GPAA1O43292 621 aa16.38■□□□□ 0.21
LMNA-210ENST00000469565 NFIAQ12857 509 aa16.38■□□□□ 0.21
LMNA-210ENST00000469565 RASA3Q14644 834 aa16.38■□□□□ 0.21
LMNA-210ENST00000469565 PRAMEF18Q5VWM3 479 aa16.38■□□□□ 0.21
LMNA-210ENST00000469565 CCDC129Q6ZRS4 1044 aa16.38■□□□□ 0.21
LMNA-210ENST00000469565 MAPKAPK5Q8IW41 473 aa16.38■□□□□ 0.21
LMNA-210ENST00000469565 HELLSQ9NRZ9 838 aa16.38■□□□□ 0.21
LMNA-210ENST00000469565 SLC4A4Q9Y6R1 1079 aa16.38■□□□□ 0.21
LMNA-210ENST00000469565 PITPNM2Q9BZ72 1349 aa16.38■□□□□ 0.21
LMNA-210ENST00000469565 PRKAB2O43741 272 aa16.37■□□□□ 0.21
LMNA-210ENST00000469565 WDHD1O75717 1129 aaPredicted RBP16.37■□□□□ 0.21
LMNA-210ENST00000469565 APPP05067 770 aa16.37■□□□□ 0.21
LMNA-210ENST00000469565 CHMLP26374 656 aa16.37■□□□□ 0.21
LMNA-210ENST00000469565 MCMDC2Q4G0Z9 681 aa16.37■□□□□ 0.21
LMNA-210ENST00000469565 DLK2Q6UY11 383 aa16.37■□□□□ 0.21
LMNA-210ENST00000469565 TICAM2Q86XR7 235 aa16.37■□□□□ 0.21
LMNA-210ENST00000469565 ZSCAN29Q8IWY8 852 aaPredicted RBP16.37■□□□□ 0.21
LMNA-210ENST00000469565 SDR42E1Q8WUS8 393 aa16.37■□□□□ 0.21
LMNA-210ENST00000469565 RUFY2Q8WXA3 655 aa16.37■□□□□ 0.21
LMNA-210ENST00000469565 DEFB129Q9H1M3 183 aa16.37■□□□□ 0.21
LMNA-210ENST00000469565 DDX4Q9NQI0 724 aaKnown RBP16.37■□□□□ 0.21
LMNA-210ENST00000469565 FOCADQ5VW36 1801 aa16.37■□□□□ 0.21
LMNA-210ENST00000469565 STRBPQ96SI9 672 aaKnown RBP16.36■□□□□ 0.21
LMNA-210ENST00000469565 IDI2Q9BXS1 227 aa16.36■□□□□ 0.21
LMNA-210ENST00000469565 TMEM39BQ9GZU3 492 aa16.36■□□□□ 0.21
LMNA-210ENST00000469565 FAM198AQ9UFP1 575 aa16.36■□□□□ 0.21
LMNA-210ENST00000469565 CDC45O75419 566 aa16.35■□□□□ 0.21
LMNA-210ENST00000469565 HUNKP57058 714 aa16.35■□□□□ 0.21
LMNA-210ENST00000469565 SLC4A8Q2Y0W8 1093 aa16.35■□□□□ 0.21
LMNA-210ENST00000469565 FKBP1CQ5VVH2 108 aa16.35■□□□□ 0.21
LMNA-210ENST00000469565 CASC1Q6TDU7 716 aa16.35■□□□□ 0.21
LMNA-210ENST00000469565 ZFPM1Q8IX07 1006 aa16.35■□□□□ 0.21
LMNA-210ENST00000469565 DDRGK1Q96HY6 314 aa16.35■□□□□ 0.21
LMNA-210ENST00000469565 SAP30BPQ9UHR5 308 aaKnown RBP16.35■□□□□ 0.21
LMNA-210ENST00000469565 NAV1Q8NEY1 1877 aa16.35■□□□□ 0.21
LMNA-210ENST00000469565 ENTPD3O75355 529 aa16.34■□□□□ 0.21
LMNA-210ENST00000469565 MFAP1P55081 439 aaKnown RBP16.34■□□□□ 0.21
LMNA-210ENST00000469565 SOX10P56693 466 aa16.34■□□□□ 0.21
LMNA-210ENST00000469565 ZNF589Q86UQ0 364 aaPredicted RBP16.34■□□□□ 0.21
LMNA-210ENST00000469565 FAM83AQ86UY5 434 aa16.34■□□□□ 0.21
LMNA-210ENST00000469565 FAM151AQ8WW52 585 aa16.34■□□□□ 0.21
LMNA-210ENST00000469565 ZIC5Q96T25 663 aa16.34■□□□□ 0.21
LMNA-210ENST00000469565 FLT1P17948 1338 aa16.34■□□□□ 0.21
LMNA-210ENST00000469565 POLR3DP05423 398 aaPredicted RBP16.33■□□□□ 0.2
LMNA-210ENST00000469565 GNAT2P19087 354 aa16.33■□□□□ 0.2
LMNA-210ENST00000469565 CDCA5Q96FF9 252 aa16.33■□□□□ 0.2
LMNA-210ENST00000469565 OSBPL5Q9H0X9 879 aaPredicted RBP16.33■□□□□ 0.2
LMNA-210ENST00000469565 DCP1AQ9NPI6 582 aaPredicted RBP16.33■□□□□ 0.2
LMNA-210ENST00000469565 MCM9Q9NXL9 1143 aa16.33■□□□□ 0.2
LMNA-210ENST00000469565 SAGE1Q9NXZ1 904 aa16.33■□□□□ 0.2
LMNA-210ENST00000469565 PPP2R3BQ9Y5P8 575 aa16.33■□□□□ 0.2
LMNA-210ENST00000469565 CCDC171Q6TFL3 1326 aa16.33■□□□□ 0.2
LMNA-210ENST00000469565 PATL2C9JE40 543 aaKnown RBP16.32■□□□□ 0.2
LMNA-210ENST00000469565 NF2P35240 595 aa16.32■□□□□ 0.2
LMNA-210ENST00000469565 PRKG1Q13976 671 aa16.32■□□□□ 0.2
LMNA-210ENST00000469565 NBPF12Q5TAG4 269 aaPredicted RBP16.32■□□□□ 0.2
LMNA-210ENST00000469565 RGMBQ6NW40 437 aa16.32■□□□□ 0.2
LMNA-210ENST00000469565 ATP8A2Q9NTI2 1148 aa16.32■□□□□ 0.2
LMNA-210ENST00000469565 PALD1Q9ULE6 856 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms