RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 HTRA3P83110 453 aa9.7□□□□□ -0.86
HDAC6-216ENST00000468949 PICALMQ13492 652 aa9.7□□□□□ -0.86
HDAC6-216ENST00000468949 TNFAIP1Q13829 316 aa9.7□□□□□ -0.86
HDAC6-216ENST00000468949 ADGRA1Q86SQ6 560 aa9.7□□□□□ -0.86
HDAC6-216ENST00000468949 ZNF589Q86UQ0 364 aaPredicted RBP9.7□□□□□ -0.86
HDAC6-216ENST00000468949 TRPM4Q8TD43 1214 aa9.7□□□□□ -0.86
HDAC6-216ENST00000468949 ZC3H15Q8WU90 426 aaKnown RBP9.7□□□□□ -0.86
HDAC6-216ENST00000468949 SEC62Q99442 399 aaKnown RBP9.7□□□□□ -0.86
HDAC6-216ENST00000468949 NAPBQ9H115 298 aa9.7□□□□□ -0.86
HDAC6-216ENST00000468949 SHTN1A0MZ66 631 aa9.69□□□□□ -0.86
HDAC6-216ENST00000468949 CLRN2A0PK11 232 aa9.69□□□□□ -0.86
HDAC6-216ENST00000468949 TMEM88BA6NKF7 163 aa9.69□□□□□ -0.86
HDAC6-216ENST00000468949 CNTNAP1P78357 1384 aa9.69□□□□□ -0.86
HDAC6-216ENST00000468949 C8orf34Q49A92 452 aa9.69□□□□□ -0.86
HDAC6-216ENST00000468949 RNF20Q5VTR2 975 aa9.69□□□□□ -0.86
HDAC6-216ENST00000468949 SAMD7Q7Z3H4 446 aa9.69□□□□□ -0.86
HDAC6-216ENST00000468949 ZSCAN29Q8IWY8 852 aaPredicted RBP9.69□□□□□ -0.86
HDAC6-216ENST00000468949 SH3RF3Q8TEJ3 882 aaPredicted RBP9.69□□□□□ -0.86
HDAC6-216ENST00000468949 ZNF384Q8TF68 577 aa9.69□□□□□ -0.86
HDAC6-216ENST00000468949 TGFBRAP1Q8WUH2 860 aa9.69□□□□□ -0.86
HDAC6-216ENST00000468949 RPAP1Q9BWH6 1393 aaPredicted RBP9.69□□□□□ -0.86
HDAC6-216ENST00000468949 TRIM34Q9BYJ4 488 aa9.69□□□□□ -0.86
HDAC6-216ENST00000468949 TDRD3Q9H7E2 651 aaKnown RBP9.69□□□□□ -0.86
HDAC6-216ENST00000468949 CTNNA3Q9UI47 895 aa9.69□□□□□ -0.86
HDAC6-216ENST00000468949 MYH2Q9UKX2 1941 aa9.68□□□□□ -0.86
HDAC6-216ENST00000468949 ECM29Q5VYK3 1845 aa9.68□□□□□ -0.86
HDAC6-216ENST00000468949 WNT10BO00744 389 aa9.68□□□□□ -0.86
HDAC6-216ENST00000468949 HLA-DOAP06340 250 aa9.68□□□□□ -0.86
HDAC6-216ENST00000468949 SLC3A2P08195 630 aaKnown RBP9.68□□□□□ -0.86
HDAC6-216ENST00000468949 PPP4CP60510 307 aa9.68□□□□□ -0.86
HDAC6-216ENST00000468949 GSE1Q14687 1217 aa9.68□□□□□ -0.86
HDAC6-216ENST00000468949 APOBEC3HQ6NTF7 200 aaKnown RBP9.68□□□□□ -0.86
HDAC6-216ENST00000468949 CDC42EP5Q6NZY7 148 aa9.68□□□□□ -0.86
HDAC6-216ENST00000468949 APOBEC3FQ8IUX4 373 aaKnown RBP9.68□□□□□ -0.86
HDAC6-216ENST00000468949 MAPKAPK5Q8IW41 473 aa9.68□□□□□ -0.86
HDAC6-216ENST00000468949 DNAJC5GQ8N7S2 189 aa9.68□□□□□ -0.86
HDAC6-216ENST00000468949 MTMR14Q8NCE2 650 aa9.68□□□□□ -0.86
HDAC6-216ENST00000468949 SDR42E1Q8WUS8 393 aa9.68□□□□□ -0.86
HDAC6-216ENST00000468949 DCPSQ96C86 337 aaKnown RBP9.68□□□□□ -0.86
HDAC6-216ENST00000468949 STRBPQ96SI9 672 aaKnown RBP9.68□□□□□ -0.86
HDAC6-216ENST00000468949 RIOK1Q9BRS2 568 aaKnown RBP9.68□□□□□ -0.86
HDAC6-216ENST00000468949 DSCC1Q9BVC3 393 aa9.68□□□□□ -0.86
HDAC6-216ENST00000468949 ATP8A2Q9NTI2 1148 aa9.68□□□□□ -0.86
HDAC6-216ENST00000468949 ARPP21Q9UBL0 812 aaPredicted RBP9.68□□□□□ -0.86
HDAC6-216ENST00000468949 MYO5AQ9Y4I1 1855 aaKnown RBP9.68□□□□□ -0.86
HDAC6-216ENST00000468949 FLT1P17948 1338 aa9.67□□□□□ -0.86
HDAC6-216ENST00000468949 TCP10L2B9ZVM9 353 aa9.67□□□□□ -0.86
HDAC6-216ENST00000468949 PATL2C9JE40 543 aaKnown RBP9.67□□□□□ -0.86
HDAC6-216ENST00000468949 POLR3DP05423 398 aaPredicted RBP9.67□□□□□ -0.86
HDAC6-216ENST00000468949 HSPD1P10809 573 aaKnown RBP9.67□□□□□ -0.86
HDAC6-216ENST00000468949 ZKSCAN1P17029 563 aaPredicted RBP9.67□□□□□ -0.86
HDAC6-216ENST00000468949 IMMTQ16891 758 aaKnown RBP9.67□□□□□ -0.86
HDAC6-216ENST00000468949 GIMAP6Q6P9H5 292 aa9.67□□□□□ -0.86
HDAC6-216ENST00000468949 RASEFQ8IZ41 740 aa9.67□□□□□ -0.86
HDAC6-216ENST00000468949 JMYQ8N9B5 988 aa9.67□□□□□ -0.86
HDAC6-216ENST00000468949 PRMT6Q96LA8 375 aaPredicted RBP9.67□□□□□ -0.86
HDAC6-216ENST00000468949 MCM9Q9NXL9 1143 aa9.67□□□□□ -0.86
HDAC6-216ENST00000468949 GGA3Q9NZ52 723 aa9.67□□□□□ -0.86
HDAC6-216ENST00000468949 ZNF70Q9UC06 446 aaPredicted RBP9.67□□□□□ -0.86
HDAC6-216ENST00000468949 PGAP2Q9UHJ9 254 aa9.67□□□□□ -0.86
HDAC6-216ENST00000468949 PAPPA2Q9BXP8 1791 aa9.66□□□□□ -0.86
HDAC6-216ENST00000468949 ZMYM6O95789 1325 aa9.66□□□□□ -0.86
HDAC6-216ENST00000468949 TRAF5O00463 557 aa9.66□□□□□ -0.86
HDAC6-216ENST00000468949 EPB41L2O43491 1005 aaKnown RBP9.66□□□□□ -0.86
HDAC6-216ENST00000468949 PRKAB2O43741 272 aa9.66□□□□□ -0.86
HDAC6-216ENST00000468949 EGFRP00533 1210 aa9.66□□□□□ -0.86
HDAC6-216ENST00000468949 HIRAP54198 1017 aaPredicted RBP9.66□□□□□ -0.86
HDAC6-216ENST00000468949 CACNB3P54284 484 aa9.66□□□□□ -0.86
HDAC6-216ENST00000468949 RHBDL3P58872 404 aa9.66□□□□□ -0.86
HDAC6-216ENST00000468949 TCP10Q12799 353 aa9.66□□□□□ -0.86
HDAC6-216ENST00000468949 NBPF9Q3BBW0 867 aa9.66□□□□□ -0.86
HDAC6-216ENST00000468949 VPS53Q5VIR6 699 aa9.66□□□□□ -0.86
HDAC6-216ENST00000468949 ANGEL2Q5VTE6 544 aaKnown RBP9.66□□□□□ -0.86
HDAC6-216ENST00000468949 CDC37L1Q7L3B6 337 aa9.66□□□□□ -0.86
HDAC6-216ENST00000468949 SULF1Q8IWU6 871 aa9.66□□□□□ -0.86
HDAC6-216ENST00000468949 IFNL3Q8IZI9 196 aa9.66□□□□□ -0.86
HDAC6-216ENST00000468949 CRACR2BQ8N4Y2 399 aaPredicted RBP9.66□□□□□ -0.86
HDAC6-216ENST00000468949 FAM212AQ96EL1 285 aa9.66□□□□□ -0.86
HDAC6-216ENST00000468949 BACH2Q9BYV9 841 aa9.66□□□□□ -0.86
HDAC6-216ENST00000468949 GLIS2Q9BZE0 524 aaPredicted RBP9.66□□□□□ -0.86
HDAC6-216ENST00000468949 MKRN1Q9UHC7 482 aaKnown RBP9.66□□□□□ -0.86
HDAC6-216ENST00000468949 SAP30BPQ9UHR5 308 aaKnown RBP9.66□□□□□ -0.86
HDAC6-216ENST00000468949 ABT1Q9ULW3 272 aaKnown RBP9.66□□□□□ -0.86
HDAC6-216ENST00000468949 PCDHAC2Q9Y5I4 1007 aa9.66□□□□□ -0.86
HDAC6-216ENST00000468949 RBM8AQ9Y5S9 174 aaKnown RBP9.66□□□□□ -0.86
HDAC6-216ENST00000468949 PITPNM2Q9BZ72 1349 aa9.65□□□□□ -0.86
HDAC6-216ENST00000468949 RASSF10A6NK89 507 aa9.65□□□□□ -0.86
HDAC6-216ENST00000468949 GSG1L2A8MUP6 293 aa9.65□□□□□ -0.86
HDAC6-216ENST00000468949 MINDY4BA8MYZ0 360 aa9.65□□□□□ -0.86
HDAC6-216ENST00000468949 ZNF213O14771 459 aa9.65□□□□□ -0.86
HDAC6-216ENST00000468949 ENTPD3O75355 529 aa9.65□□□□□ -0.86
HDAC6-216ENST00000468949 PTH1RQ03431 593 aa9.65□□□□□ -0.86
HDAC6-216ENST00000468949 SLC4A8Q2Y0W8 1093 aa9.65□□□□□ -0.86
HDAC6-216ENST00000468949 FKBP1CQ5VVH2 108 aa9.65□□□□□ -0.86
HDAC6-216ENST00000468949 KRT26Q7Z3Y9 468 aa9.65□□□□□ -0.86
HDAC6-216ENST00000468949 TTC6Q86TZ1 520 aa9.65□□□□□ -0.86
HDAC6-216ENST00000468949 HOOK2Q96ED9 719 aa9.65□□□□□ -0.86
HDAC6-216ENST00000468949 IDI2Q9BXS1 227 aa9.65□□□□□ -0.86
HDAC6-216ENST00000468949 LSG1Q9H089 658 aaKnown RBP9.65□□□□□ -0.86
HDAC6-216ENST00000468949 OSBPL5Q9H0X9 879 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms