RNA–Protein interactions for RNA: ENST00000468723.1

GPNMB-207, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 808 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-207ENST00000468723 TTBK2Q6IQ55 1244 aa6.85□□□□□ -1.31
GPNMB-207ENST00000468723 TMC4Q7Z404 712 aa6.85□□□□□ -1.31
GPNMB-207ENST00000468723 ANKRD24Q8TF21 1146 aa6.85□□□□□ -1.31
GPNMB-207ENST00000468723 BCL2L13Q9BXK5 485 aa6.85□□□□□ -1.31
GPNMB-207ENST00000468723 ATG3Q9NT62 314 aa6.85□□□□□ -1.31
GPNMB-207ENST00000468723 PCDHA4Q9UN74 947 aa6.85□□□□□ -1.31
GPNMB-207ENST00000468723 PRR19A6NJB7 356 aa6.84□□□□□ -1.31
GPNMB-207ENST00000468723 HYAL3O43820 417 aaPredicted RBP6.84□□□□□ -1.31
GPNMB-207ENST00000468723 SORBS3O60504 671 aa6.84□□□□□ -1.31
GPNMB-207ENST00000468723 TRIM37O94972 964 aa6.84□□□□□ -1.31
GPNMB-207ENST00000468723 MED26O95402 600 aa6.84□□□□□ -1.31
GPNMB-207ENST00000468723 PTPN11Q06124 597 aaPredicted RBP6.84□□□□□ -1.31
GPNMB-207ENST00000468723 ZC3H12AQ5D1E8 599 aaKnown RBP6.84□□□□□ -1.31
GPNMB-207ENST00000468723 PPM1JQ5JR12 505 aa6.84□□□□□ -1.31
GPNMB-207ENST00000468723 ARTNQ5T4W7 220 aa6.84□□□□□ -1.31
GPNMB-207ENST00000468723 C12orf40Q86WS4 652 aa6.84□□□□□ -1.31
GPNMB-207ENST00000468723 SMYD4Q8IYR2 804 aaPredicted RBP6.84□□□□□ -1.31
GPNMB-207ENST00000468723 GIPC2Q8TF65 315 aa6.84□□□□□ -1.31
GPNMB-207ENST00000468723 OSBPL1AQ9BXW6 950 aa6.84□□□□□ -1.31
GPNMB-207ENST00000468723 MRS2Q9HD23 443 aa6.84□□□□□ -1.31
GPNMB-207ENST00000468723 SSU72Q9NP77 194 aaKnown RBP6.84□□□□□ -1.31
GPNMB-207ENST00000468723 VTI1BQ9UEU0 232 aa6.84□□□□□ -1.31
GPNMB-207ENST00000468723 CYP8B1Q9UNU6 501 aa6.84□□□□□ -1.31
GPNMB-207ENST00000468723 FAM170BA6NMN3 283 aa6.83□□□□□ -1.32
GPNMB-207ENST00000468723 LRP8Q14114 963 aa6.83□□□□□ -1.32
GPNMB-207ENST00000468723 TAF1CQ15572 869 aaPredicted RBP6.83□□□□□ -1.32
GPNMB-207ENST00000468723 ZAR1Q86SH2 424 aa6.83□□□□□ -1.32
GPNMB-207ENST00000468723 GIMAP7Q8NHV1 300 aa6.83□□□□□ -1.32
GPNMB-207ENST00000468723 ZFP64Q9NPA5 681 aa6.83□□□□□ -1.32
GPNMB-207ENST00000468723 PICK1Q9NRD5 415 aa6.83□□□□□ -1.32
GPNMB-207ENST00000468723 C1GALT1Q9NS00 363 aa6.83□□□□□ -1.32
GPNMB-207ENST00000468723 CACNA2D2Q9NY47 1150 aa6.83□□□□□ -1.32
GPNMB-207ENST00000468723 F6X3S4 739 aa6.82□□□□□ -1.32
GPNMB-207ENST00000468723 COBLO75128 1261 aa6.82□□□□□ -1.32
GPNMB-207ENST00000468723 NEFMP07197 916 aa6.82□□□□□ -1.32
GPNMB-207ENST00000468723 LMNB1P20700 586 aa6.82□□□□□ -1.32
GPNMB-207ENST00000468723 HOXA10P31260 410 aaPredicted RBP6.82□□□□□ -1.32
GPNMB-207ENST00000468723 MFAP1P55081 439 aaKnown RBP6.82□□□□□ -1.32
GPNMB-207ENST00000468723 CDK5R2Q13319 367 aa6.82□□□□□ -1.32
GPNMB-207ENST00000468723 SEZ6L2Q6UXD5 910 aa6.82□□□□□ -1.32
GPNMB-207ENST00000468723 GATA6Q92908 595 aa6.82□□□□□ -1.32
GPNMB-207ENST00000468723 PCMTD2Q9NV79 361 aa6.82□□□□□ -1.32
GPNMB-207ENST00000468723 LEMD3Q9Y2U8 911 aa6.82□□□□□ -1.32
GPNMB-207ENST00000468723 PCDHB5Q9Y5E4 795 aa6.82□□□□□ -1.32
GPNMB-207ENST00000468723 CDK8P49336 464 aa6.81□□□□□ -1.32
GPNMB-207ENST00000468723 LIG3P49916 1009 aa6.81□□□□□ -1.32
GPNMB-207ENST00000468723 ERVK-24P63145 666 aa6.81□□□□□ -1.32
GPNMB-207ENST00000468723 SEPT6Q14141 434 aa6.81□□□□□ -1.32
GPNMB-207ENST00000468723 INPP5AQ14642 412 aa6.81□□□□□ -1.32
GPNMB-207ENST00000468723 XP32Q5T750 250 aa6.81□□□□□ -1.32
GPNMB-207ENST00000468723 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.81□□□□□ -1.32
GPNMB-207ENST00000468723 RNF214Q8ND24 703 aa6.81□□□□□ -1.32
GPNMB-207ENST00000468723 ISL2Q96A47 359 aa6.81□□□□□ -1.32
GPNMB-207ENST00000468723 ELMO3Q96BJ8 720 aa6.81□□□□□ -1.32
GPNMB-207ENST00000468723 PIM2Q9P1W9 311 aa6.81□□□□□ -1.32
GPNMB-207ENST00000468723 PCOLCE2Q9UKZ9 415 aa6.81□□□□□ -1.32
GPNMB-207ENST00000468723 TLR6Q9Y2C9 796 aa6.81□□□□□ -1.32
GPNMB-207ENST00000468723 GRIK1P39086 918 aa6.8□□□□□ -1.32
GPNMB-207ENST00000468723 CD97P48960 835 aa6.8□□□□□ -1.32
GPNMB-207ENST00000468723 ZNF326Q5BKZ1 582 aaKnown RBP6.8□□□□□ -1.32
GPNMB-207ENST00000468723 ZNF765Q7L2R6 523 aa6.8□□□□□ -1.32
GPNMB-207ENST00000468723 NPM2Q86SE8 214 aaKnown RBP6.8□□□□□ -1.32
GPNMB-207ENST00000468723 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.8□□□□□ -1.32
GPNMB-207ENST00000468723 GAL3ST3Q96A11 431 aa6.8□□□□□ -1.32
GPNMB-207ENST00000468723 USP31Q70CQ4 1352 aa6.8□□□□□ -1.32
GPNMB-207ENST00000468723 PRAMEF27A3QJZ7 478 aa6.79□□□□□ -1.32
GPNMB-207ENST00000468723 DUSP27Q5VZP5 1158 aa6.79□□□□□ -1.32
GPNMB-207ENST00000468723 LRFN4Q6PJG9 635 aa6.79□□□□□ -1.32
GPNMB-207ENST00000468723 UBE3DQ7Z6J8 389 aa6.79□□□□□ -1.32
GPNMB-207ENST00000468723 PLPPR2Q96GM1 343 aa6.79□□□□□ -1.32
GPNMB-207ENST00000468723 CRELD1Q96HD1 420 aa6.79□□□□□ -1.32
GPNMB-207ENST00000468723 KRTAP4-8Q9BYQ9 185 aa6.79□□□□□ -1.32
GPNMB-207ENST00000468723 LRRC4CQ9HCJ2 640 aa6.79□□□□□ -1.32
GPNMB-207ENST00000468723 CYP26A1O43174 497 aa6.78□□□□□ -1.32
GPNMB-207ENST00000468723 FAM87AP0C7U9 286 aa6.78□□□□□ -1.32
GPNMB-207ENST00000468723 TFE3P19532 575 aaPredicted RBP6.78□□□□□ -1.32
GPNMB-207ENST00000468723 INTS5Q6P9B9 1019 aaKnown RBP6.78□□□□□ -1.32
GPNMB-207ENST00000468723 OGFOD3Q6PK18 319 aa6.78□□□□□ -1.32
GPNMB-207ENST00000468723 AGMOQ6ZNB7 445 aa6.78□□□□□ -1.32
GPNMB-207ENST00000468723 NBPF11Q86T75 865 aa6.78□□□□□ -1.32
GPNMB-207ENST00000468723 JARID2Q92833 1246 aaPredicted RBP6.78□□□□□ -1.32
GPNMB-207ENST00000468723 METTL22Q9BUU2 404 aaPredicted RBP6.78□□□□□ -1.32
GPNMB-207ENST00000468723 LEFTY1O75610 366 aa6.77□□□□□ -1.33
GPNMB-207ENST00000468723 ST13P50502 369 aaKnown RBP6.77□□□□□ -1.33
GPNMB-207ENST00000468723 RPS26P62854 115 aaKnown RBP6.77□□□□□ -1.33
GPNMB-207ENST00000468723 RING1Q06587 406 aa6.77□□□□□ -1.33
GPNMB-207ENST00000468723 WIPI1Q5MNZ9 446 aaPredicted RBP6.77□□□□□ -1.33
GPNMB-207ENST00000468723 ZBTB37Q5TC79 503 aa6.77□□□□□ -1.33
GPNMB-207ENST00000468723 HDXQ7Z353 690 aa6.77□□□□□ -1.33
GPNMB-207ENST00000468723 NOC4LQ9BVI4 516 aaKnown RBP6.77□□□□□ -1.33
GPNMB-207ENST00000468723 FOSL1P15407 271 aa6.76□□□□□ -1.33
GPNMB-207ENST00000468723 NTF4P34130 210 aa6.76□□□□□ -1.33
GPNMB-207ENST00000468723 CYP27A1Q02318 531 aa6.76□□□□□ -1.33
GPNMB-207ENST00000468723 SCARA3Q6AZY7 606 aa6.76□□□□□ -1.33
GPNMB-207ENST00000468723 CDC37L1Q7L3B6 337 aa6.76□□□□□ -1.33
GPNMB-207ENST00000468723 PHC3Q8NDX5 983 aa6.76□□□□□ -1.33
GPNMB-207ENST00000468723 MIR1-1HGQ9H1L0 117 aa6.76□□□□□ -1.33
GPNMB-207ENST00000468723 FANCGO15287 622 aa6.75□□□□□ -1.33
GPNMB-207ENST00000468723 ZNF16P17020 682 aaPredicted RBP6.75□□□□□ -1.33
GPNMB-207ENST00000468723 CYFIP1Q7L576 1253 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms