RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 GPBP1L1Q9HC44 474 aaPredicted RBP13.5□□□□□ -0.25
MSH5-214ENST00000468602 FAM198AQ9UFP1 575 aa13.5□□□□□ -0.25
MSH5-214ENST00000468602 ANAPC4Q9UJX5 808 aa13.5□□□□□ -0.25
MSH5-214ENST00000468602 CNTNAP1P78357 1384 aa13.49□□□□□ -0.25
MSH5-214ENST00000468602 ROBO3Q96MS0 1386 aa13.49□□□□□ -0.25
MSH5-214ENST00000468602 FLT1P17948 1338 aa13.49□□□□□ -0.25
MSH5-214ENST00000468602 FGRP09769 529 aa13.49□□□□□ -0.25
MSH5-214ENST00000468602 RBM5P52756 815 aaKnown RBP eCLIP13.49□□□□□ -0.25
MSH5-214ENST00000468602 TSGA10IPQ3SY00 556 aa13.49□□□□□ -0.25
MSH5-214ENST00000468602 LDHDQ86WU2 507 aa13.49□□□□□ -0.25
MSH5-214ENST00000468602 TEX11Q8IYF3 940 aa13.49□□□□□ -0.25
MSH5-214ENST00000468602 IFNL3Q8IZI9 196 aa13.49□□□□□ -0.25
MSH5-214ENST00000468602 KCNB2Q92953 911 aa13.49□□□□□ -0.25
MSH5-214ENST00000468602 OSBPL5Q9H0X9 879 aaPredicted RBP13.49□□□□□ -0.25
MSH5-214ENST00000468602 EHD4Q9H223 541 aa13.49□□□□□ -0.25
MSH5-214ENST00000468602 RRAGCQ9HB90 399 aa13.49□□□□□ -0.25
MSH5-214ENST00000468602 EPB41L4AQ9HCS5 686 aaPredicted RBP13.49□□□□□ -0.25
MSH5-214ENST00000468602 DDX4Q9NQI0 724 aaKnown RBP13.49□□□□□ -0.25
MSH5-214ENST00000468602 TMOD2Q9NZR1 351 aa13.49□□□□□ -0.25
MSH5-214ENST00000468602 POLR2AP24928 1970 aaKnown RBP13.49□□□□□ -0.25
MSH5-214ENST00000468602 TBC1D12O60347 775 aa13.48□□□□□ -0.25
MSH5-214ENST00000468602 TNNI2P48788 182 aa13.48□□□□□ -0.25
MSH5-214ENST00000468602 TEPSINQ96N21 525 aa13.48□□□□□ -0.25
MSH5-214ENST00000468602 NACAP1Q9BZK3 213 aa13.48□□□□□ -0.25
MSH5-214ENST00000468602 ARPP21Q9UBL0 812 aaPredicted RBP13.48□□□□□ -0.25
MSH5-214ENST00000468602 SLC4A4Q9Y6R1 1079 aa13.48□□□□□ -0.25
MSH5-214ENST00000468602 MYH1P12882 1939 aa13.47□□□□□ -0.25
MSH5-214ENST00000468602 NAV1Q8NEY1 1877 aa13.47□□□□□ -0.25
MSH5-214ENST00000468602 KIF3CO14782 793 aa13.47□□□□□ -0.25
MSH5-214ENST00000468602 PRKAB2O43741 272 aa13.47□□□□□ -0.25
MSH5-214ENST00000468602 FGAP02671 866 aa13.47□□□□□ -0.25
MSH5-214ENST00000468602 PCP11498 1178 aaKnown RBP13.47□□□□□ -0.25
MSH5-214ENST00000468602 GABPAQ06546 454 aa13.47□□□□□ -0.25
MSH5-214ENST00000468602 NFIAQ12857 509 aa13.47□□□□□ -0.25
MSH5-214ENST00000468602 NECTIN1Q15223 517 aa13.47□□□□□ -0.25
MSH5-214ENST00000468602 VPS53Q5VIR6 699 aa13.47□□□□□ -0.25
MSH5-214ENST00000468602 CCDC129Q6ZRS4 1044 aa13.47□□□□□ -0.25
MSH5-214ENST00000468602 TGFBRAP1Q8WUH2 860 aa13.47□□□□□ -0.25
MSH5-214ENST00000468602 BACH2Q9BYV9 841 aa13.47□□□□□ -0.25
MSH5-214ENST00000468602 NMRK2Q9NPI5 230 aa13.47□□□□□ -0.25
MSH5-214ENST00000468602 CTNNA3Q9UI47 895 aa13.47□□□□□ -0.25
MSH5-214ENST00000468602 U3KPZ7 1027 aaPredicted RBP13.47□□□□□ -0.25
MSH5-214ENST00000468602 LAMA4Q16363 1823 aa13.46□□□□□ -0.25
MSH5-214ENST00000468602 UNCXA6NJT0 531 aa13.46□□□□□ -0.25
MSH5-214ENST00000468602 C12orf60Q5U649 245 aa13.46□□□□□ -0.25
MSH5-214ENST00000468602 ANGEL2Q5VTE6 544 aaKnown RBP13.46□□□□□ -0.25
MSH5-214ENST00000468602 CTR9Q6PD62 1173 aa13.46□□□□□ -0.25
MSH5-214ENST00000468602 KIAA1211Q6ZU35 1233 aa13.46□□□□□ -0.25
MSH5-214ENST00000468602 CDC37L1Q7L3B6 337 aa13.46□□□□□ -0.25
MSH5-214ENST00000468602 TTC6Q86TZ1 520 aa13.46□□□□□ -0.25
MSH5-214ENST00000468602 FOXP4Q8IVH2 680 aaPredicted RBP13.46□□□□□ -0.25
MSH5-214ENST00000468602 IL27Q8NEV9 243 aa13.46□□□□□ -0.25
MSH5-214ENST00000468602 DCPSQ96C86 337 aaKnown RBP13.46□□□□□ -0.25
MSH5-214ENST00000468602 HOOK2Q96ED9 719 aa13.46□□□□□ -0.25
MSH5-214ENST00000468602 DDRGK1Q96HY6 314 aa13.46□□□□□ -0.25
MSH5-214ENST00000468602 USP26Q9BXU7 913 aa13.46□□□□□ -0.25
MSH5-214ENST00000468602 DEFB129Q9H1M3 183 aa13.46□□□□□ -0.25
MSH5-214ENST00000468602 GGA3Q9NZ52 723 aa13.46□□□□□ -0.25
MSH5-214ENST00000468602 SIPA1L1O43166 1804 aa13.46□□□□□ -0.26
MSH5-214ENST00000468602 PTH1RQ03431 593 aa13.45□□□□□ -0.26
MSH5-214ENST00000468602 RASA3Q14644 834 aa13.45□□□□□ -0.26
MSH5-214ENST00000468602 RBM26Q5T8P6 1007 aaKnown RBP13.45□□□□□ -0.26
MSH5-214ENST00000468602 SH3BP5LQ7L8J4 393 aa13.45□□□□□ -0.26
MSH5-214ENST00000468602 SDR42E1Q8WUS8 393 aa13.45□□□□□ -0.26
MSH5-214ENST00000468602 PI4KBQ9UBF8 816 aa13.45□□□□□ -0.26
MSH5-214ENST00000468602 HERC5Q9UII4 1024 aaKnown RBP13.45□□□□□ -0.26
MSH5-214ENST00000468602 LAMB1P07942 1786 aa13.45□□□□□ -0.26
MSH5-214ENST00000468602 BAZ2AQ9UIF9 1905 aaKnown RBP13.45□□□□□ -0.26
MSH5-214ENST00000468602 PCNTO95613 3336 aa13.44□□□□□ -0.26
MSH5-214ENST00000468602 ASTN2O75129 1339 aaPredicted RBP13.44□□□□□ -0.26
MSH5-214ENST00000468602 CLRN2A0PK11 232 aa13.44□□□□□ -0.26
MSH5-214ENST00000468602 HSPA4P34932 840 aa13.44□□□□□ -0.26
MSH5-214ENST00000468602 USP5P45974 858 aa13.44□□□□□ -0.26
MSH5-214ENST00000468602 MAP3K11Q16584 847 aa13.44□□□□□ -0.26
MSH5-214ENST00000468602 RBM46Q8TBY0 533 aaKnown RBP13.44□□□□□ -0.26
MSH5-214ENST00000468602 NAPBQ9H115 298 aa13.44□□□□□ -0.26
MSH5-214ENST00000468602 MCM9Q9NXL9 1143 aa13.44□□□□□ -0.26
MSH5-214ENST00000468602 DDTLA6NHG4 134 aaPredicted RBP13.43□□□□□ -0.26
MSH5-214ENST00000468602 USP17L12C9JPN9 530 aa13.43□□□□□ -0.26
MSH5-214ENST00000468602 USP17L21D6R901 530 aa13.43□□□□□ -0.26
MSH5-214ENST00000468602 ITGBL1O95965 494 aaPredicted RBP13.43□□□□□ -0.26
MSH5-214ENST00000468602 ANAPC15P60006 121 aa13.43□□□□□ -0.26
MSH5-214ENST00000468602 CHADLQ6NUI6 762 aa13.43□□□□□ -0.26
MSH5-214ENST00000468602 TATDN1Q6P1N9 297 aa13.43□□□□□ -0.26
MSH5-214ENST00000468602 MAPKAPK5Q8IW41 473 aa13.43□□□□□ -0.26
MSH5-214ENST00000468602 SULF1Q8IWU6 871 aa13.43□□□□□ -0.26
MSH5-214ENST00000468602 ZFPM1Q8IX07 1006 aa13.43□□□□□ -0.26
MSH5-214ENST00000468602 GINM1Q9NU53 330 aa13.43□□□□□ -0.26
MSH5-214ENST00000468602 SWAP70Q9UH65 585 aa13.43□□□□□ -0.26
MSH5-214ENST00000468602 TCP10L2B9ZVM9 353 aa13.42□□□□□ -0.26
MSH5-214ENST00000468602 ORC4O43929 436 aa13.42□□□□□ -0.26
MSH5-214ENST00000468602 TOMM70O94826 608 aa13.42□□□□□ -0.26
MSH5-214ENST00000468602 HLA-DOAP06340 250 aa13.42□□□□□ -0.26
MSH5-214ENST00000468602 CACNB3P54284 484 aa13.42□□□□□ -0.26
MSH5-214ENST00000468602 FKBP1BP68106 108 aa13.42□□□□□ -0.26
MSH5-214ENST00000468602 SUPT20HL1Q3ZLR7 823 aa13.42□□□□□ -0.26
MSH5-214ENST00000468602 C16orf86Q6ZW13 317 aa13.42□□□□□ -0.26
MSH5-214ENST00000468602 KRT26Q7Z3Y9 468 aa13.42□□□□□ -0.26
MSH5-214ENST00000468602 AMOTL1Q8IY63 956 aa13.42□□□□□ -0.26
MSH5-214ENST00000468602 STAG1Q8WVM7 1258 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms