RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 SENP2Q9HC62 589 aa18.24■□□□□ 0.51
TSPAN4-211ENST00000468468 SLIT2O94813 1529 aa18.24■□□□□ 0.51
TSPAN4-211ENST00000468468 MYH7P12883 1935 aa18.23■□□□□ 0.51
TSPAN4-211ENST00000468468 SFPQP23246 707 aaKnown RBP eCLIP18.23■□□□□ 0.51
TSPAN4-211ENST00000468468 FAM98CQ17RN3 349 aaKnown RBP18.23■□□□□ 0.51
TSPAN4-211ENST00000468468 E4F1Q66K89 784 aaPredicted RBP18.23■□□□□ 0.51
TSPAN4-211ENST00000468468 MICU3Q86XE3 530 aa18.23■□□□□ 0.51
TSPAN4-211ENST00000468468 ANKRD36CQ5JPF3 1778 aa18.23■□□□□ 0.51
TSPAN4-211ENST00000468468 ZNF532Q9HCE3 1301 aa18.23■□□□□ 0.51
TSPAN4-211ENST00000468468 PDE8AO60658 829 aa18.23■□□□□ 0.51
TSPAN4-211ENST00000468468 UBE3CQ15386 1083 aa18.23■□□□□ 0.51
TSPAN4-211ENST00000468468 SUSD4Q5VX71 490 aa18.23■□□□□ 0.51
TSPAN4-211ENST00000468468 ZNF512BQ96KM6 892 aaPredicted RBP18.23■□□□□ 0.51
TSPAN4-211ENST00000468468 OGFRQ9NZT2 677 aa18.23■□□□□ 0.51
TSPAN4-211ENST00000468468 KIF2AO00139 706 aaPredicted RBP18.22■□□□□ 0.51
TSPAN4-211ENST00000468468 PPP6R2O75170 966 aa18.22■□□□□ 0.51
TSPAN4-211ENST00000468468 FANCCQ00597 558 aa18.22■□□□□ 0.51
TSPAN4-211ENST00000468468 SHC4Q6S5L8 630 aa18.22■□□□□ 0.51
TSPAN4-211ENST00000468468 NFXL1Q6ZNB6 911 aa18.22■□□□□ 0.51
TSPAN4-211ENST00000468468 BARGINQ6ZT62 677 aa18.22■□□□□ 0.51
TSPAN4-211ENST00000468468 JMYQ8N9B5 988 aa18.22■□□□□ 0.51
TSPAN4-211ENST00000468468 IKBKBO14920 756 aa18.22■□□□□ 0.51
TSPAN4-211ENST00000468468 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.22■□□□□ 0.51
TSPAN4-211ENST00000468468 HPSEQ9Y251 543 aa18.22■□□□□ 0.51
TSPAN4-211ENST00000468468 V9GYY5 206 aaPredicted RBP18.22■□□□□ 0.51
TSPAN4-211ENST00000468468 ZBTB43O43298 467 aa18.21■□□□□ 0.51
TSPAN4-211ENST00000468468 PTPAQ15257 358 aa18.21■□□□□ 0.51
TSPAN4-211ENST00000468468 TMEM87BQ96K49 555 aa18.21■□□□□ 0.51
TSPAN4-211ENST00000468468 C8orf37Q96NL8 207 aa18.21■□□□□ 0.51
TSPAN4-211ENST00000468468 TUBE1Q9UJT0 475 aa18.21■□□□□ 0.51
TSPAN4-211ENST00000468468 AKAP11Q9UKA4 1901 aa18.21■□□□□ 0.51
TSPAN4-211ENST00000468468 PDE6AP16499 860 aa18.21■□□□□ 0.51
TSPAN4-211ENST00000468468 IARSP41252 1262 aaKnown RBP18.21■□□□□ 0.51
TSPAN4-211ENST00000468468 PHKA1P46020 1223 aa18.21■□□□□ 0.51
TSPAN4-211ENST00000468468 VGLL2Q8N8G2 317 aa18.21■□□□□ 0.51
TSPAN4-211ENST00000468468 PPP1R13BQ96KQ4 1090 aa18.21■□□□□ 0.51
TSPAN4-211ENST00000468468 ATRNO75882 1429 aa18.21■□□□□ 0.51
TSPAN4-211ENST00000468468 NRDCO43847 1150 aa18.2■□□□□ 0.5
TSPAN4-211ENST00000468468 PDE8BO95263 885 aa18.2■□□□□ 0.5
TSPAN4-211ENST00000468468 ATP1A3P13637 1013 aa18.2■□□□□ 0.5
TSPAN4-211ENST00000468468 MAPK8IP2Q13387 824 aaPredicted RBP18.2■□□□□ 0.5
TSPAN4-211ENST00000468468 TRIM29Q14134 588 aa18.2■□□□□ 0.5
TSPAN4-211ENST00000468468 CCDC102BQ68D86 513 aa18.2■□□□□ 0.5
TSPAN4-211ENST00000468468 IGDCC4Q8TDY8 1250 aa18.2■□□□□ 0.5
TSPAN4-211ENST00000468468 ERO1AQ96HE7 468 aa18.2■□□□□ 0.5
TSPAN4-211ENST00000468468 MYL10Q9BUA6 226 aa18.2■□□□□ 0.5
TSPAN4-211ENST00000468468 INCENPQ9NQS7 918 aa18.2■□□□□ 0.5
TSPAN4-211ENST00000468468 WWC3Q9ULE0 1092 aa18.2■□□□□ 0.5
TSPAN4-211ENST00000468468 GOLGA8AA7E2F4 631 aa18.2■□□□□ 0.5
TSPAN4-211ENST00000468468 KCNQ4P56696 695 aa18.2■□□□□ 0.5
TSPAN4-211ENST00000468468 PNOCQ13519 176 aa18.2■□□□□ 0.5
TSPAN4-211ENST00000468468 AIDAQ96BJ3 306 aa18.2■□□□□ 0.5
TSPAN4-211ENST00000468468 CLIC6Q96NY7 704 aa18.2■□□□□ 0.5
TSPAN4-211ENST00000468468 MAP3K14Q99558 947 aa18.2■□□□□ 0.5
TSPAN4-211ENST00000468468 PSDA5PKW4 1024 aaPredicted RBP18.19■□□□□ 0.5
TSPAN4-211ENST00000468468 CAMTA2O94983 1202 aa18.19■□□□□ 0.5
TSPAN4-211ENST00000468468 SLU7O95391 586 aaKnown RBP18.19■□□□□ 0.5
TSPAN4-211ENST00000468468 DHX8Q14562 1220 aaKnown RBP18.19■□□□□ 0.5
TSPAN4-211ENST00000468468 NTRK3Q16288 839 aa18.19■□□□□ 0.5
TSPAN4-211ENST00000468468 TMEM67Q5HYA8 995 aa18.19■□□□□ 0.5
TSPAN4-211ENST00000468468 HSD3B7Q9H2F3 369 aa18.19■□□□□ 0.5
TSPAN4-211ENST00000468468 HELBQ8NG08 1087 aaPredicted RBP18.19■□□□□ 0.5
TSPAN4-211ENST00000468468 STRBPQ96SI9 672 aaKnown RBP18.19■□□□□ 0.5
TSPAN4-211ENST00000468468 LY9Q9HBG7 655 aa18.19■□□□□ 0.5
TSPAN4-211ENST00000468468 UBAP1LF5GYI3 381 aa18.19■□□□□ 0.5
TSPAN4-211ENST00000468468 RANBP6O60518 1105 aaKnown RBP18.19■□□□□ 0.5
TSPAN4-211ENST00000468468 RESP18Q5W5W9 173 aa18.19■□□□□ 0.5
TSPAN4-211ENST00000468468 NGLY1Q96IV0 654 aa18.19■□□□□ 0.5
TSPAN4-211ENST00000468468 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.19■□□□□ 0.5
TSPAN4-211ENST00000468468 FAM217BQ9NTX9 383 aaPredicted RBP18.19■□□□□ 0.5
TSPAN4-211ENST00000468468 DDX41Q9UJV9 622 aaKnown RBP18.19■□□□□ 0.5
TSPAN4-211ENST00000468468 TCRBV5S4A2TA0A5A2 114 aa18.18■□□□□ 0.5
TSPAN4-211ENST00000468468 ARID4AP29374 1257 aaPredicted RBP18.18■□□□□ 0.5
TSPAN4-211ENST00000468468 ZNF397Q8NF99 534 aaPredicted RBP18.18■□□□□ 0.5
TSPAN4-211ENST00000468468 MYH14Q7Z406 1995 aaKnown RBP18.18■□□□□ 0.5
TSPAN4-211ENST00000468468 MYH3P11055 1940 aa18.18■□□□□ 0.5
TSPAN4-211ENST00000468468 SERPINC1P01008 464 aa18.18■□□□□ 0.5
TSPAN4-211ENST00000468468 UQCRFS1P1P0C7P4 283 aa18.18■□□□□ 0.5
TSPAN4-211ENST00000468468 KCNJ6P48051 423 aa18.18■□□□□ 0.5
TSPAN4-211ENST00000468468 UBASH3AP57075 661 aa18.18■□□□□ 0.5
TSPAN4-211ENST00000468468 MYL5Q02045 173 aa18.18■□□□□ 0.5
TSPAN4-211ENST00000468468 SYT10Q6XYQ8 523 aa18.18■□□□□ 0.5
TSPAN4-211ENST00000468468 IPO4Q8TEX9 1081 aaKnown RBP18.18■□□□□ 0.5
TSPAN4-211ENST00000468468 SLC26A6Q9BXS9 759 aa18.18■□□□□ 0.5
TSPAN4-211ENST00000468468 FAM237AA0A1B0GTK4 181 aa18.17■□□□□ 0.5
TSPAN4-211ENST00000468468 UBE2Q2LH0YL09 131 aa18.17■□□□□ 0.5
TSPAN4-211ENST00000468468 CUTAO60888 179 aa18.17■□□□□ 0.5
TSPAN4-211ENST00000468468 ELF2Q15723 593 aa18.17■□□□□ 0.5
TSPAN4-211ENST00000468468 SGMS1Q86VZ5 419 aa18.17■□□□□ 0.5
TSPAN4-211ENST00000468468 DPF2Q92785 391 aa18.17■□□□□ 0.5
TSPAN4-211ENST00000468468 CTDSPL2Q05D32 466 aa18.17■□□□□ 0.5
TSPAN4-211ENST00000468468 SSRP1Q08945 709 aaKnown RBP18.17■□□□□ 0.5
TSPAN4-211ENST00000468468 LONRF3Q496Y0 759 aa18.17■□□□□ 0.5
TSPAN4-211ENST00000468468 KMT5BQ4FZB7 885 aa18.17■□□□□ 0.5
TSPAN4-211ENST00000468468 PTF1AQ7RTS3 328 aa18.17■□□□□ 0.5
TSPAN4-211ENST00000468468 SEC31BQ9NQW1 1179 aa18.17■□□□□ 0.5
TSPAN4-211ENST00000468468 SLC12A7Q9Y666 1083 aa18.17■□□□□ 0.5
TSPAN4-211ENST00000468468 MYO5AQ9Y4I1 1855 aaKnown RBP18.16■□□□□ 0.5
TSPAN4-211ENST00000468468 PATL2C9JE40 543 aaKnown RBP18.16■□□□□ 0.5
TSPAN4-211ENST00000468468 SNAP23O00161 211 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms