RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 AATFQ9NY61 560 aaKnown RBP eCLIP14.11□□□□□ -0.15
CDHR3-205ENST00000468143 SNCAIPQ9Y6H5 919 aa14.11□□□□□ -0.15
CDHR3-205ENST00000468143 RPAP1Q9BWH6 1393 aaPredicted RBP14.1□□□□□ -0.15
CDHR3-205ENST00000468143 IGF2BP3O00425 579 aaKnown RBP eCLIP14.1□□□□□ -0.15
CDHR3-205ENST00000468143 SMARCA5O60264 1052 aaPredicted RBP14.1□□□□□ -0.15
CDHR3-205ENST00000468143 IDH1O75874 414 aaKnown RBP14.1□□□□□ -0.15
CDHR3-205ENST00000468143 INHBEP58166 350 aa14.1□□□□□ -0.15
CDHR3-205ENST00000468143 PTPN18Q99952 460 aa14.1□□□□□ -0.15
CDHR3-205ENST00000468143 CYP7A1P22680 504 aa14.09□□□□□ -0.15
CDHR3-205ENST00000468143 DYNLL1P63167 89 aaKnown RBP14.09□□□□□ -0.15
CDHR3-205ENST00000468143 DGKZQ13574 1117 aa14.09□□□□□ -0.15
CDHR3-205ENST00000468143 TEX11Q8IYF3 940 aa14.09□□□□□ -0.15
CDHR3-205ENST00000468143 MS4A4AQ96JQ5 239 aa14.09□□□□□ -0.15
CDHR3-205ENST00000468143 NOL10Q9BSC4 688 aaKnown RBP14.09□□□□□ -0.15
CDHR3-205ENST00000468143 ZNF112Q9UJU3 913 aa14.09□□□□□ -0.15
CDHR3-205ENST00000468143 SPDYE5A6NIY4 337 aa14.08□□□□□ -0.16
CDHR3-205ENST00000468143 BAG3O95817 575 aa14.08□□□□□ -0.16
CDHR3-205ENST00000468143 ERO1BQ86YB8 467 aa14.08□□□□□ -0.16
CDHR3-205ENST00000468143 MAGEB6Q8N7X4 407 aa14.08□□□□□ -0.16
CDHR3-205ENST00000468143 ZNF296Q8WUU4 475 aaPredicted RBP14.08□□□□□ -0.16
CDHR3-205ENST00000468143 CRBNQ96SW2 442 aa14.08□□□□□ -0.16
CDHR3-205ENST00000468143 DNAJC2Q99543 621 aaKnown RBP14.08□□□□□ -0.16
CDHR3-205ENST00000468143 MCOLN1Q9GZU1 580 aa14.08□□□□□ -0.16
CDHR3-205ENST00000468143 PCDHB15Q9Y5E8 787 aa14.08□□□□□ -0.16
CDHR3-205ENST00000468143 RFX7Q2KHR2 1363 aa14.08□□□□□ -0.16
CDHR3-205ENST00000468143 MYH2Q9UKX2 1941 aa14.07□□□□□ -0.16
CDHR3-205ENST00000468143 CCL15-CCL14A0A0B4J2E2 113 aa14.07□□□□□ -0.16
CDHR3-205ENST00000468143 TESPA1A2RU30 521 aaPredicted RBP14.07□□□□□ -0.16
CDHR3-205ENST00000468143 FAM196BA6NMK8 535 aa14.07□□□□□ -0.16
CDHR3-205ENST00000468143 GPR25O00155 361 aa14.07□□□□□ -0.16
CDHR3-205ENST00000468143 IRF6O14896 467 aa14.07□□□□□ -0.16
CDHR3-205ENST00000468143 ALDH1A1P00352 501 aa14.07□□□□□ -0.16
CDHR3-205ENST00000468143 GTF2A2P52657 109 aa14.07□□□□□ -0.16
CDHR3-205ENST00000468143 CCL15Q16663 113 aa14.07□□□□□ -0.16
CDHR3-205ENST00000468143 MAPKAPK5Q8IW41 473 aa14.07□□□□□ -0.16
CDHR3-205ENST00000468143 MIGA1Q8NAN2 632 aa14.07□□□□□ -0.16
CDHR3-205ENST00000468143 TGFBRAP1Q8WUH2 860 aa14.07□□□□□ -0.16
CDHR3-205ENST00000468143 BRI3BPQ8WY22 251 aa14.07□□□□□ -0.16
CDHR3-205ENST00000468143 EDC3Q96F86 508 aaKnown RBP14.07□□□□□ -0.16
CDHR3-205ENST00000468143 ABHD8Q96I13 439 aa14.07□□□□□ -0.16
CDHR3-205ENST00000468143 LRRCC1Q9C099 1032 aa14.07□□□□□ -0.16
CDHR3-205ENST00000468143 OSBPL5Q9H0X9 879 aaPredicted RBP14.07□□□□□ -0.16
CDHR3-205ENST00000468143 BOLA2Q9H3K6 86 aa14.07□□□□□ -0.16
CDHR3-205ENST00000468143 PHF20L1A8MW92 1017 aa14.06□□□□□ -0.16
CDHR3-205ENST00000468143 GOLIM4O00461 696 aa14.06□□□□□ -0.16
CDHR3-205ENST00000468143 PPP4CP60510 307 aa14.06□□□□□ -0.16
CDHR3-205ENST00000468143 MAP3K12Q12852 859 aa14.06□□□□□ -0.16
CDHR3-205ENST00000468143 OTUD7BQ6GQQ9 843 aa14.06□□□□□ -0.16
CDHR3-205ENST00000468143 DCTPP1Q9H773 170 aa14.06□□□□□ -0.16
CDHR3-205ENST00000468143 ATRNL1Q5VV63 1379 aa14.06□□□□□ -0.16
CDHR3-205ENST00000468143 NPM3O75607 178 aaKnown RBP14.05□□□□□ -0.16
CDHR3-205ENST00000468143 MAP4K4O95819 1239 aaPredicted RBP14.05□□□□□ -0.16
CDHR3-205ENST00000468143 PPATQ06203 517 aa14.05□□□□□ -0.16
CDHR3-205ENST00000468143 CRHR2Q13324 411 aa14.05□□□□□ -0.16
CDHR3-205ENST00000468143 PPIL2Q13356 520 aa14.05□□□□□ -0.16
CDHR3-205ENST00000468143 SLC4A8Q2Y0W8 1093 aa14.05□□□□□ -0.16
CDHR3-205ENST00000468143 FAM43AQ8N2R8 423 aa14.05□□□□□ -0.16
CDHR3-205ENST00000468143 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.05□□□□□ -0.16
CDHR3-205ENST00000468143 OTOFQ9HC10 1997 aa14.05□□□□□ -0.16
CDHR3-205ENST00000468143 AKAP11Q9UKA4 1901 aa14.04□□□□□ -0.16
CDHR3-205ENST00000468143 CCDC85CA6NKD9 419 aa14.04□□□□□ -0.16
CDHR3-205ENST00000468143 CETPP11597 493 aa14.04□□□□□ -0.16
CDHR3-205ENST00000468143 PLCG2P16885 1265 aa14.04□□□□□ -0.16
CDHR3-205ENST00000468143 MAP3K10Q02779 954 aa14.04□□□□□ -0.16
CDHR3-205ENST00000468143 SNAPC2Q13487 334 aa14.04□□□□□ -0.16
CDHR3-205ENST00000468143 TTF1Q15361 905 aaPredicted RBP14.04□□□□□ -0.16
CDHR3-205ENST00000468143 NOL9Q5SY16 702 aaKnown RBP14.04□□□□□ -0.16
CDHR3-205ENST00000468143 CCDC84Q86UT8 332 aaPredicted RBP14.04□□□□□ -0.16
CDHR3-205ENST00000468143 SCYL3Q8IZE3 742 aa14.04□□□□□ -0.16
CDHR3-205ENST00000468143 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.04□□□□□ -0.16
CDHR3-205ENST00000468143 CFHR5Q9BXR6 569 aa14.04□□□□□ -0.16
CDHR3-205ENST00000468143 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.04□□□□□ -0.16
CDHR3-205ENST00000468143 SAP30BPQ9UHR5 308 aaKnown RBP14.04□□□□□ -0.16
CDHR3-205ENST00000468143 CASP8AP2Q9UKL3 1982 aa14.03□□□□□ -0.16
CDHR3-205ENST00000468143 FKTNO75072 461 aa14.03□□□□□ -0.16
CDHR3-205ENST00000468143 ATP5JP18859 108 aa14.03□□□□□ -0.16
CDHR3-205ENST00000468143 SLFNL1Q499Z3 407 aa14.03□□□□□ -0.16
CDHR3-205ENST00000468143 SLC9C2Q5TAH2 1124 aa14.03□□□□□ -0.16
CDHR3-205ENST00000468143 PICK1Q9NRD5 415 aa14.03□□□□□ -0.16
CDHR3-205ENST00000468143 PALD1Q9ULE6 856 aa14.03□□□□□ -0.16
CDHR3-205ENST00000468143 ZHX2Q9Y6X8 837 aa14.03□□□□□ -0.16
CDHR3-205ENST00000468143 FLT1P17948 1338 aa14.03□□□□□ -0.16
CDHR3-205ENST00000468143 BTBD19C9JJ37 291 aa14.02□□□□□ -0.17
CDHR3-205ENST00000468143 TBC1D12O60347 775 aa14.02□□□□□ -0.17
CDHR3-205ENST00000468143 IGSF3O75054 1194 aa14.02□□□□□ -0.17
CDHR3-205ENST00000468143 PDE6AP16499 860 aa14.02□□□□□ -0.17
CDHR3-205ENST00000468143 PTPRAP18433 802 aa14.02□□□□□ -0.17
CDHR3-205ENST00000468143 USP5P45974 858 aa14.02□□□□□ -0.17
CDHR3-205ENST00000468143 RRP1BQ14684 758 aaKnown RBP14.02□□□□□ -0.17
CDHR3-205ENST00000468143 TAF1CQ15572 869 aaPredicted RBP14.02□□□□□ -0.17
CDHR3-205ENST00000468143 CTU1Q7Z7A3 348 aaKnown RBP14.02□□□□□ -0.17
CDHR3-205ENST00000468143 PAG1Q9NWQ8 432 aa14.02□□□□□ -0.17
CDHR3-205ENST00000468143 ZNF532Q9HCE3 1301 aa14.01□□□□□ -0.17
CDHR3-205ENST00000468143 MAGEB6P1A0A0J9YX57 407 aa14.01□□□□□ -0.17
CDHR3-205ENST00000468143 CTNND1O60716 968 aaKnown RBP14.01□□□□□ -0.17
CDHR3-205ENST00000468143 CHGBP05060 677 aa14.01□□□□□ -0.17
CDHR3-205ENST00000468143 TSHZ3Q63HK5 1081 aa14.01□□□□□ -0.17
CDHR3-205ENST00000468143 HAUS7Q99871 368 aa14.01□□□□□ -0.17
CDHR3-205ENST00000468143 DHX36Q9H2U1 1008 aaKnown RBP14.01□□□□□ -0.17
CDHR3-205ENST00000468143 ZFYVE28Q9HCC9 887 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms