RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 STK36Q9NRP7 1315 aa11.92□□□□□ -0.5
MSH5-213ENST00000468136 GPR75-ASB3A0A0A6YYF3 556 aa11.92□□□□□ -0.5
MSH5-213ENST00000468136 PTPDC1A2A3K4 754 aa11.92□□□□□ -0.5
MSH5-213ENST00000468136 VPS37CA5D8V6 355 aaPredicted RBP11.92□□□□□ -0.5
MSH5-213ENST00000468136 B4E1Z4 1266 aa11.92□□□□□ -0.5
MSH5-213ENST00000468136 ZBTB43O43298 467 aa11.92□□□□□ -0.5
MSH5-213ENST00000468136 PRPF40AO75400 957 aaKnown RBP11.92□□□□□ -0.5
MSH5-213ENST00000468136 LETM1O95202 739 aaPredicted RBP11.92□□□□□ -0.5
MSH5-213ENST00000468136 PRDX5P30044 214 aa11.92□□□□□ -0.5
MSH5-213ENST00000468136 METAP2P50579 478 aaKnown RBP eCLIP11.92□□□□□ -0.5
MSH5-213ENST00000468136 UBE2HP62256 183 aa11.92□□□□□ -0.5
MSH5-213ENST00000468136 WTAPQ15007 396 aa11.92□□□□□ -0.5
MSH5-213ENST00000468136 NFXL1Q6ZNB6 911 aa11.92□□□□□ -0.5
MSH5-213ENST00000468136 C2CD5Q86YS7 1000 aa11.92□□□□□ -0.5
MSH5-213ENST00000468136 LRRC2Q9BYS8 371 aa11.92□□□□□ -0.5
MSH5-213ENST00000468136 VPS33BQ9H267 617 aa11.92□□□□□ -0.5
MSH5-213ENST00000468136 DCP1AQ9NPI6 582 aaPredicted RBP11.92□□□□□ -0.5
MSH5-213ENST00000468136 ZSWIM5Q9P217 1185 aa11.92□□□□□ -0.5
MSH5-213ENST00000468136 POLLQ9UGP5 575 aa11.92□□□□□ -0.5
MSH5-213ENST00000468136 GAKO14976 1311 aa11.91□□□□□ -0.5
MSH5-213ENST00000468136 PRKAB2O43741 272 aa11.91□□□□□ -0.5
MSH5-213ENST00000468136 KDM4AO75164 1064 aa11.91□□□□□ -0.5
MSH5-213ENST00000468136 EZH2Q15910 746 aaKnown RBP11.91□□□□□ -0.5
MSH5-213ENST00000468136 APOA5Q6Q788 366 aa11.91□□□□□ -0.5
MSH5-213ENST00000468136 ADGRA1Q86SQ6 560 aa11.91□□□□□ -0.5
MSH5-213ENST00000468136 ZNF384Q8TF68 577 aa11.91□□□□□ -0.5
MSH5-213ENST00000468136 ZNF396Q96N95 335 aaPredicted RBP11.91□□□□□ -0.5
MSH5-213ENST00000468136 RTFDC1Q9BY42 306 aaPredicted RBP11.91□□□□□ -0.5
MSH5-213ENST00000468136 LY9Q9HBG7 655 aa11.91□□□□□ -0.5
MSH5-213ENST00000468136 NAP1L2Q9ULW6 460 aaPredicted RBP11.91□□□□□ -0.5
MSH5-213ENST00000468136 LTBP1Q14766 1721 aa11.91□□□□□ -0.5
MSH5-213ENST00000468136 ANKRD31Q8N7Z5 1873 aa11.91□□□□□ -0.5
MSH5-213ENST00000468136 ROBO3Q96MS0 1386 aa11.91□□□□□ -0.5
MSH5-213ENST00000468136 NEDD4P46934 1319 aa11.9□□□□□ -0.5
MSH5-213ENST00000468136 A0A0G2JLW4 131 aa11.9□□□□□ -0.5
MSH5-213ENST00000468136 GOLGA6L3A6NEY3 463 aa11.9□□□□□ -0.5
MSH5-213ENST00000468136 MINDY4BA8MYZ0 360 aa11.9□□□□□ -0.5
MSH5-213ENST00000468136 G3V3G9 751 aa11.9□□□□□ -0.5
MSH5-213ENST00000468136 USP5P45974 858 aa11.9□□□□□ -0.5
MSH5-213ENST00000468136 HDLBPQ00341 1268 aaKnown RBP11.9□□□□□ -0.5
MSH5-213ENST00000468136 EN1Q05925 392 aaPredicted RBP11.9□□□□□ -0.5
MSH5-213ENST00000468136 MFSD14BQ5SR56 506 aa11.9□□□□□ -0.5
MSH5-213ENST00000468136 DCAF8Q5TAQ9 597 aa11.9□□□□□ -0.5
MSH5-213ENST00000468136 SOGA3Q5TF21 947 aa11.9□□□□□ -0.5
MSH5-213ENST00000468136 CTR9Q6PD62 1173 aa11.9□□□□□ -0.5
MSH5-213ENST00000468136 CYB5R4Q7L1T6 521 aa11.9□□□□□ -0.5
MSH5-213ENST00000468136 BRAPQ7Z569 592 aa11.9□□□□□ -0.5
MSH5-213ENST00000468136 SDR42E1Q8WUS8 393 aa11.9□□□□□ -0.5
MSH5-213ENST00000468136 MAP3K14Q99558 947 aa11.9□□□□□ -0.5
MSH5-213ENST00000468136 RBM28Q9NW13 759 aaKnown RBP11.9□□□□□ -0.5
MSH5-213ENST00000468136 AATFQ9NY61 560 aaKnown RBP eCLIP11.9□□□□□ -0.5
MSH5-213ENST00000468136 HPS5Q9UPZ3 1129 aa11.9□□□□□ -0.5
MSH5-213ENST00000468136 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.9□□□□□ -0.5
MSH5-213ENST00000468136 WTIPA6NIX2 430 aaPredicted RBP11.89□□□□□ -0.51
MSH5-213ENST00000468136 GOLGA8AA7E2F4 631 aa11.89□□□□□ -0.51
MSH5-213ENST00000468136 USP17L12C9JPN9 530 aa11.89□□□□□ -0.51
MSH5-213ENST00000468136 USP17L21D6R901 530 aa11.89□□□□□ -0.51
MSH5-213ENST00000468136 DDAH1O94760 285 aa11.89□□□□□ -0.51
MSH5-213ENST00000468136 CTDNEP1O95476 244 aa11.89□□□□□ -0.51
MSH5-213ENST00000468136 IFNAR1P17181 557 aa11.89□□□□□ -0.51
MSH5-213ENST00000468136 ZNF445P59923 1031 aa11.89□□□□□ -0.51
MSH5-213ENST00000468136 DYNLL1P63167 89 aaKnown RBP11.89□□□□□ -0.51
MSH5-213ENST00000468136 CCT2P78371 535 aaKnown RBP11.89□□□□□ -0.51
MSH5-213ENST00000468136 CTDSPL2Q05D32 466 aa11.89□□□□□ -0.51
MSH5-213ENST00000468136 COL9A3Q14050 684 aaPredicted RBP11.89□□□□□ -0.51
MSH5-213ENST00000468136 PPP4R3BQ5MIZ7 849 aa11.89□□□□□ -0.51
MSH5-213ENST00000468136 CHST3Q7LGC8 479 aa11.89□□□□□ -0.51
MSH5-213ENST00000468136 TRIM22Q8IYM9 498 aa11.89□□□□□ -0.51
MSH5-213ENST00000468136 CNKSR2Q8WXI2 1034 aa11.89□□□□□ -0.51
MSH5-213ENST00000468136 ZNF622Q969S3 477 aaKnown RBP eCLIP11.89□□□□□ -0.511e-13■□□□□ 10.5
MSH5-213ENST00000468136 TOMM22Q9NS69 142 aa11.89□□□□□ -0.51
MSH5-213ENST00000468136 RBM27Q9P2N5 1060 aaKnown RBP11.89□□□□□ -0.51
MSH5-213ENST00000468136 ORC3Q9UBD5 711 aaPredicted RBP11.89□□□□□ -0.51
MSH5-213ENST00000468136 MKRN1Q9UHC7 482 aaKnown RBP11.89□□□□□ -0.51
MSH5-213ENST00000468136 BRPF3Q9ULD4 1205 aa11.89□□□□□ -0.51
MSH5-213ENST00000468136 CHD4Q14839 1912 aa11.88□□□□□ -0.51
MSH5-213ENST00000468136 FSD2A1L4K1 749 aa11.88□□□□□ -0.51
MSH5-213ENST00000468136 JAK2O60674 1132 aa11.88□□□□□ -0.51
MSH5-213ENST00000468136 IARSP41252 1262 aaKnown RBP11.88□□□□□ -0.51
MSH5-213ENST00000468136 MRE11P49959 708 aa11.88□□□□□ -0.51
MSH5-213ENST00000468136 RESTQ13127 1097 aa11.88□□□□□ -0.51
MSH5-213ENST00000468136 TRIM29Q14134 588 aa11.88□□□□□ -0.51
MSH5-213ENST00000468136 RTN1Q16799 776 aa11.88□□□□□ -0.51
MSH5-213ENST00000468136 C12orf60Q5U649 245 aa11.88□□□□□ -0.51
MSH5-213ENST00000468136 STRIP1Q5VSL9 837 aa11.88□□□□□ -0.51
MSH5-213ENST00000468136 HHIPL2Q6UWX4 724 aa11.88□□□□□ -0.51
MSH5-213ENST00000468136 CDC37L1Q7L3B6 337 aa11.88□□□□□ -0.51
MSH5-213ENST00000468136 CATIPQ7Z7H3 387 aa11.88□□□□□ -0.51
MSH5-213ENST00000468136 USP48Q86UV5 1035 aa11.88□□□□□ -0.51
MSH5-213ENST00000468136 FAM177A1Q8N128 213 aaPredicted RBP11.88□□□□□ -0.51
MSH5-213ENST00000468136 FBXO18Q8NFZ0 1043 aa11.88□□□□□ -0.51
MSH5-213ENST00000468136 ANKS1AQ92625 1134 aa11.88□□□□□ -0.51
MSH5-213ENST00000468136 C8orf76Q96K31 380 aa11.88□□□□□ -0.51
MSH5-213ENST00000468136 ZSCAN10Q96SZ4 725 aaPredicted RBP11.88□□□□□ -0.51
MSH5-213ENST00000468136 ANO8Q9HCE9 1232 aaPredicted RBP11.88□□□□□ -0.51
MSH5-213ENST00000468136 TCP11L1Q9NUJ3 509 aa11.88□□□□□ -0.51
MSH5-213ENST00000468136 MCM9Q9NXL9 1143 aa11.88□□□□□ -0.51
MSH5-213ENST00000468136 NPM3O75607 178 aaKnown RBP11.87□□□□□ -0.51
MSH5-213ENST00000468136 XBP1P17861 261 aa11.87□□□□□ -0.51
MSH5-213ENST00000468136 SSRP1Q08945 709 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms