RNA–Protein interactions for RNA: ENST00000468105.5

RPP40-204, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 2

Gene RPP40, Length 632 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-204ENST00000468105 ATG9AQ7Z3C6 839 aa17.02■□□□□ 0.32
RPP40-204ENST00000468105 PRRT2Q7Z6L0 340 aaPredicted RBP17.02■□□□□ 0.32
RPP40-204ENST00000468105 HTATIP2Q9BUP3 242 aa17.02■□□□□ 0.32
RPP40-204ENST00000468105 SUGT1Q9Y2Z0 365 aa17.02■□□□□ 0.32
RPP40-204ENST00000468105 AFG3L2Q9Y4W6 797 aa17.02■□□□□ 0.32
RPP40-204ENST00000468105 MYH13Q9UKX3 1938 aa17.02■□□□□ 0.31
RPP40-204ENST00000468105 PTPRAP18433 802 aa17.01■□□□□ 0.31
RPP40-204ENST00000468105 SLAIN1Q8ND83 568 aa17.01■□□□□ 0.31
RPP40-204ENST00000468105 PARK7Q99497 189 aaKnown RBP17.01■□□□□ 0.31
RPP40-204ENST00000468105 CRISPLD2Q9H0B8 497 aa17.01■□□□□ 0.31
RPP40-204ENST00000468105 USP44Q9H0E7 712 aa17.01■□□□□ 0.31
RPP40-204ENST00000468105 PAK6Q9NQU5 681 aaPredicted RBP17.01■□□□□ 0.31
RPP40-204ENST00000468105 USP40Q9NVE5 1235 aa17.01■□□□□ 0.31
RPP40-204ENST00000468105 ZHX2Q9Y6X8 837 aa17.01■□□□□ 0.31
RPP40-204ENST00000468105 RFX7Q2KHR2 1363 aa17.01■□□□□ 0.31
RPP40-204ENST00000468105 CXCL11O14625 94 aa17■□□□□ 0.31
RPP40-204ENST00000468105 UBXN2AP68543 259 aa17■□□□□ 0.31
RPP40-204ENST00000468105 TRIM32Q13049 653 aa17■□□□□ 0.31
RPP40-204ENST00000468105 PUM3Q15397 648 aaKnown RBP17■□□□□ 0.31
RPP40-204ENST00000468105 Q7L0L9 218 aa17■□□□□ 0.31
RPP40-204ENST00000468105 PAWRQ96IZ0 340 aaKnown RBP17■□□□□ 0.31
RPP40-204ENST00000468105 DDX4Q9NQI0 724 aaKnown RBP17■□□□□ 0.31
RPP40-204ENST00000468105 KIF16BQ96L93 1317 aa16.99■□□□□ 0.31
RPP40-204ENST00000468105 DOCK2Q92608 1830 aa16.99■□□□□ 0.31
RPP40-204ENST00000468105 DDTLA6NHG4 134 aaPredicted RBP16.99■□□□□ 0.31
RPP40-204ENST00000468105 TREML2Q5T2D2 321 aa16.99■□□□□ 0.31
RPP40-204ENST00000468105 MRPL50Q8N5N7 158 aaKnown RBP16.99■□□□□ 0.31
RPP40-204ENST00000468105 HOOK2Q96ED9 719 aa16.99■□□□□ 0.31
RPP40-204ENST00000468105 GDF15Q99988 308 aa16.99■□□□□ 0.31
RPP40-204ENST00000468105 NR2E3Q9Y5X4 410 aa16.99■□□□□ 0.31
RPP40-204ENST00000468105 MAST3O60307 1309 aa16.98■□□□□ 0.31
RPP40-204ENST00000468105 EVI5O60447 810 aa16.98■□□□□ 0.31
RPP40-204ENST00000468105 TFRCP02786 760 aaKnown RBP16.98■□□□□ 0.31
RPP40-204ENST00000468105 RGS3P49796 1198 aa16.98■□□□□ 0.31
RPP40-204ENST00000468105 MAP3K10Q02779 954 aa16.98■□□□□ 0.31
RPP40-204ENST00000468105 GADL1Q6ZQY3 521 aa16.98■□□□□ 0.31
RPP40-204ENST00000468105 SCYL3Q8IZE3 742 aa16.98■□□□□ 0.31
RPP40-204ENST00000468105 LAMA2P24043 3122 aaKnown RBP16.97■□□□□ 0.31
RPP40-204ENST00000468105 EYA2O00167 538 aa16.97■□□□□ 0.31
RPP40-204ENST00000468105 PEX10O60683 326 aa16.97■□□□□ 0.31
RPP40-204ENST00000468105 PHKA1P46020 1223 aa16.97■□□□□ 0.31
RPP40-204ENST00000468105 IRF5Q13568 498 aa16.97■□□□□ 0.31
RPP40-204ENST00000468105 RRP1BQ14684 758 aaKnown RBP16.97■□□□□ 0.31
RPP40-204ENST00000468105 WDR66Q8TBY9 1149 aa16.97■□□□□ 0.31
RPP40-204ENST00000468105 PXYLP1Q8TE99 480 aa16.97■□□□□ 0.31
RPP40-204ENST00000468105 ZNF384Q8TF68 577 aa16.97■□□□□ 0.31
RPP40-204ENST00000468105 ZMYND8Q9ULU4 1186 aaPredicted RBP16.97■□□□□ 0.31
RPP40-204ENST00000468105 PLXNB2O15031 1838 aa16.97■□□□□ 0.31
RPP40-204ENST00000468105 VCANP13611 3396 aa16.97■□□□□ 0.31
RPP40-204ENST00000468105 A0A1W2PPC1 479 aa16.96■□□□□ 0.31
RPP40-204ENST00000468105 FAM196BA6NMK8 535 aa16.96■□□□□ 0.31
RPP40-204ENST00000468105 IFIT1P09914 478 aaKnown RBP16.96■□□□□ 0.31
RPP40-204ENST00000468105 ADORA1P30542 326 aa16.96■□□□□ 0.31
RPP40-204ENST00000468105 ANKRD13CQ8N6S4 541 aa16.96■□□□□ 0.31
RPP40-204ENST00000468105 MYH2Q9UKX2 1941 aa16.96■□□□□ 0.3
RPP40-204ENST00000468105 DOCK1Q14185 1865 aa16.95■□□□□ 0.3
RPP40-204ENST00000468105 TRIM75PA6NK02 468 aa16.95■□□□□ 0.3
RPP40-204ENST00000468105 TNPO2O14787 897 aaKnown RBP16.95■□□□□ 0.3
RPP40-204ENST00000468105 LPIN2Q92539 896 aa16.95■□□□□ 0.3
RPP40-204ENST00000468105 IDI2Q9BXS1 227 aa16.95■□□□□ 0.3
RPP40-204ENST00000468105 GJD2Q9UKL4 321 aa16.95■□□□□ 0.3
RPP40-204ENST00000468105 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.95■□□□□ 0.3
RPP40-204ENST00000468105 GAKO14976 1311 aa16.95■□□□□ 0.3
RPP40-204ENST00000468105 E9PSI1 815 aa16.94■□□□□ 0.3
RPP40-204ENST00000468105 SYN1P17600 705 aa16.94■□□□□ 0.3
RPP40-204ENST00000468105 C7orf61Q8IZ16 206 aa16.94■□□□□ 0.3
RPP40-204ENST00000468105 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.94■□□□□ 0.3
RPP40-204ENST00000468105 TAOK2Q9UL54 1235 aa16.94■□□□□ 0.3
RPP40-204ENST00000468105 EYSQ5T1H1 3165 aa16.94■□□□□ 0.3
RPP40-204ENST00000468105 LDHBP07195 334 aaKnown RBP16.93■□□□□ 0.3
RPP40-204ENST00000468105 SLC5A1P13866 664 aa16.93■□□□□ 0.3
RPP40-204ENST00000468105 SLFN5Q08AF3 891 aa16.93■□□□□ 0.3
RPP40-204ENST00000468105 FASTKD5Q7L8L6 764 aaKnown RBP16.93■□□□□ 0.3
RPP40-204ENST00000468105 TRMT2AQ8IZ69 625 aaKnown RBP16.93■□□□□ 0.3
RPP40-204ENST00000468105 SIL1Q9H173 461 aa16.93■□□□□ 0.3
RPP40-204ENST00000468105 SLC45A1Q9Y2W3 748 aa16.93■□□□□ 0.3
RPP40-204ENST00000468105 SPTBN5Q9NRC6 3674 aaKnown RBP16.93■□□□□ 0.3
RPP40-204ENST00000468105 SALL1Q9NSC2 1324 aa16.93■□□□□ 0.3
RPP40-204ENST00000468105 DDX60LQ5H9U9 1706 aaKnown RBP16.93■□□□□ 0.3
RPP40-204ENST00000468105 ENTPD3O75355 529 aa16.92■□□□□ 0.3
RPP40-204ENST00000468105 BMP8BP34820 402 aa16.92■□□□□ 0.3
RPP40-204ENST00000468105 SSH1Q8WYL5 1049 aa16.92■□□□□ 0.3
RPP40-204ENST00000468105 AGTPBP1Q9UPW5 1226 aa16.92■□□□□ 0.3
RPP40-204ENST00000468105 PA2G4Q9UQ80 394 aaKnown RBP16.92■□□□□ 0.3
RPP40-204ENST00000468105 CENPBP07199 599 aaPredicted RBP16.91■□□□□ 0.3
RPP40-204ENST00000468105 RHBDL3P58872 404 aa16.91■□□□□ 0.3
RPP40-204ENST00000468105 JAG1P78504 1218 aa16.91■□□□□ 0.3
RPP40-204ENST00000468105 PICALMQ13492 652 aa16.91■□□□□ 0.3
RPP40-204ENST00000468105 ATP2B3Q16720 1220 aa16.91■□□□□ 0.3
RPP40-204ENST00000468105 DEFB123Q8N688 67 aa16.91■□□□□ 0.3
RPP40-204ENST00000468105 PICK1Q9NRD5 415 aa16.91■□□□□ 0.3
RPP40-204ENST00000468105 LOC285556D6RIA3 1793 aa16.91■□□□□ 0.3
RPP40-204ENST00000468105 PFASO15067 1338 aa16.91■□□□□ 0.3
RPP40-204ENST00000468105 DNAH12Q6ZR08 3092 aa16.9■□□□□ 0.3
RPP40-204ENST00000468105 CTNND1O60716 968 aaKnown RBP16.9■□□□□ 0.3
RPP40-204ENST00000468105 MAGEA10P43363 369 aaPredicted RBP16.9■□□□□ 0.3
RPP40-204ENST00000468105 RASGRF1Q13972 1273 aa16.9■□□□□ 0.3
RPP40-204ENST00000468105 POTEEQ6S8J3 1075 aa16.9■□□□□ 0.3
RPP40-204ENST00000468105 NECAB2Q7Z6G3 386 aa16.9■□□□□ 0.3
RPP40-204ENST00000468105 SMCR8Q8TEV9 937 aaPredicted RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms