RNA–Protein interactions for RNA: ENST00000467762.2

RIF1-209, Transcript of replication timing regulatory factor 1, humanhuman

TSL 4

Gene RIF1, Length 545 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-209ENST00000467762 LARP1Q6PKG0 1096 aaKnown RBP6.23□□□□□ -1.41
RIF1-209ENST00000467762 ARHGEF25Q86VW2 580 aa6.23□□□□□ -1.41
RIF1-209ENST00000467762 SEPT12Q8IYM1 358 aa6.23□□□□□ -1.41
RIF1-209ENST00000467762 ZGPATQ8N5A5 531 aaKnown RBP6.23□□□□□ -1.41
RIF1-209ENST00000467762 GPT2Q8TD30 523 aa6.23□□□□□ -1.41
RIF1-209ENST00000467762 STK32AQ8WU08 396 aa6.23□□□□□ -1.41
RIF1-209ENST00000467762 TTC14Q96N46 770 aa6.23□□□□□ -1.41
RIF1-209ENST00000467762 NAP1L5Q96NT1 182 aaPredicted RBP6.23□□□□□ -1.41
RIF1-209ENST00000467762 LSG1Q9H089 658 aaKnown RBP6.23□□□□□ -1.41
RIF1-209ENST00000467762 DIAPH3Q9NSV4 1193 aa6.23□□□□□ -1.41
RIF1-209ENST00000467762 C9orf78Q9NZ63 289 aaPredicted RBP6.23□□□□□ -1.41
RIF1-209ENST00000467762 HMG20BQ9P0W2 317 aa6.23□□□□□ -1.41
RIF1-209ENST00000467762 SMC3Q9UQE7 1217 aa6.23□□□□□ -1.41
RIF1-209ENST00000467762 SUGT1Q9Y2Z0 365 aa6.23□□□□□ -1.41
RIF1-209ENST00000467762 CYP46A1Q9Y6A2 500 aa6.23□□□□□ -1.41
RIF1-209ENST00000467762 CCDC171Q6TFL3 1326 aa6.23□□□□□ -1.41
RIF1-209ENST00000467762 TLDC2A0PJX2 215 aa6.22□□□□□ -1.41
RIF1-209ENST00000467762 PI4KAP2A4QPH2 592 aa6.22□□□□□ -1.41
RIF1-209ENST00000467762 SCAMP3O14828 347 aaKnown RBP6.22□□□□□ -1.41
RIF1-209ENST00000467762 VSIG8P0DPA2 414 aa6.22□□□□□ -1.41
RIF1-209ENST00000467762 SERPINB4P48594 390 aa6.22□□□□□ -1.41
RIF1-209ENST00000467762 CEBPAP49715 358 aaPredicted RBP6.22□□□□□ -1.41
RIF1-209ENST00000467762 PTSQ03393 145 aa6.22□□□□□ -1.41
RIF1-209ENST00000467762 NEXNQ0ZGT2 675 aa6.22□□□□□ -1.41
RIF1-209ENST00000467762 KRT32Q14532 448 aa6.22□□□□□ -1.41
RIF1-209ENST00000467762 TSGA10IPQ3SY00 556 aa6.22□□□□□ -1.41
RIF1-209ENST00000467762 NBPF6Q5VWK0 638 aa6.22□□□□□ -1.41
RIF1-209ENST00000467762 PI4KAP1Q8N8J0 262 aa6.22□□□□□ -1.41
RIF1-209ENST00000467762 RNF217Q8TC41 542 aa6.22□□□□□ -1.41
RIF1-209ENST00000467762 NBPF4Q96M43 638 aa6.22□□□□□ -1.41
RIF1-209ENST00000467762 RBSNQ9H1K0 784 aa6.22□□□□□ -1.41
RIF1-209ENST00000467762 POLMQ9NP87 494 aaPredicted RBP6.22□□□□□ -1.41
RIF1-209ENST00000467762 DDX21Q9NR30 783 aaKnown RBP eCLIP6.22□□□□□ -1.41
RIF1-209ENST00000467762 ZMIZ1Q9ULJ6 1067 aa6.22□□□□□ -1.41
RIF1-209ENST00000467762 SNX14Q9Y5W7 946 aa6.22□□□□□ -1.41
RIF1-209ENST00000467762 GRM8O00222 908 aa6.21□□□□□ -1.42
RIF1-209ENST00000467762 STX6O43752 255 aa6.21□□□□□ -1.42
RIF1-209ENST00000467762 CAVIN2O95810 425 aa6.21□□□□□ -1.42
RIF1-209ENST00000467762 GCP02774 474 aa6.21□□□□□ -1.42
RIF1-209ENST00000467762 EIF2S2P20042 333 aaKnown RBP6.21□□□□□ -1.42
RIF1-209ENST00000467762 LORP23490 312 aaPredicted RBP6.21□□□□□ -1.42
RIF1-209ENST00000467762 PTGIRP43119 386 aa6.21□□□□□ -1.42
RIF1-209ENST00000467762 INSM1Q01101 510 aaPredicted RBP6.21□□□□□ -1.42
RIF1-209ENST00000467762 RUFY3Q7L099 469 aa6.21□□□□□ -1.42
RIF1-209ENST00000467762 PIK3R5Q8WYR1 880 aa6.21□□□□□ -1.42
RIF1-209ENST00000467762 CDCA7Q9BWT1 371 aaPredicted RBP6.21□□□□□ -1.42
RIF1-209ENST00000467762 PHAXQ9H814 394 aaKnown RBP6.21□□□□□ -1.42
RIF1-209ENST00000467762 PDRG1Q9NUG6 133 aa6.21□□□□□ -1.42
RIF1-209ENST00000467762 CHPF2Q9P2E5 772 aa6.21□□□□□ -1.42
RIF1-209ENST00000467762 SPG7Q9UQ90 795 aa6.21□□□□□ -1.42
RIF1-209ENST00000467762 ZKSCAN5Q9Y2L8 839 aa6.21□□□□□ -1.42
RIF1-209ENST00000467762 ELP1O95163 1332 aa6.21□□□□□ -1.42
RIF1-209ENST00000467762 ADCY9O60503 1353 aa6.2□□□□□ -1.42
RIF1-209ENST00000467762 SYCE3A1L190 88 aa6.2□□□□□ -1.42
RIF1-209ENST00000467762 HMGB1P1B2RPK0 211 aaPredicted RBP6.2□□□□□ -1.42
RIF1-209ENST00000467762 NBPF7P0C2Y1 421 aaPredicted RBP6.2□□□□□ -1.42
RIF1-209ENST00000467762 ATP2B1P20020 1258 aa6.2□□□□□ -1.42
RIF1-209ENST00000467762 SCTRP47872 440 aa6.2□□□□□ -1.42
RIF1-209ENST00000467762 KIAA2012Q0VF49 1180 aa6.2□□□□□ -1.42
RIF1-209ENST00000467762 PKP1Q13835 747 aa6.2□□□□□ -1.42
RIF1-209ENST00000467762 NECTIN1Q15223 517 aa6.2□□□□□ -1.42
RIF1-209ENST00000467762 PTPROQ16827 1216 aa6.2□□□□□ -1.42
RIF1-209ENST00000467762 ESCO1Q5FWF5 840 aa6.2□□□□□ -1.42
RIF1-209ENST00000467762 ATL3Q6DD88 541 aa6.2□□□□□ -1.42
RIF1-209ENST00000467762 SDE2Q6IQ49 451 aa6.2□□□□□ -1.42
RIF1-209ENST00000467762 FBXO33Q7Z6M2 555 aa6.2□□□□□ -1.42
RIF1-209ENST00000467762 USP48Q86UV5 1035 aa6.2□□□□□ -1.42
RIF1-209ENST00000467762 MORC4Q8TE76 937 aa6.2□□□□□ -1.42
RIF1-209ENST00000467762 MAP4K1Q92918 833 aa6.2□□□□□ -1.42
RIF1-209ENST00000467762 LTV1Q96GA3 475 aaPredicted RBP6.2□□□□□ -1.42
RIF1-209ENST00000467762 SCAND2PQ9GZW5 306 aaPredicted RBP6.2□□□□□ -1.42
RIF1-209ENST00000467762 LGR6Q9HBX8 967 aa6.2□□□□□ -1.42
RIF1-209ENST00000467762 IL1RAPL2Q9NP60 686 aa6.2□□□□□ -1.42
RIF1-209ENST00000467762 TMEM63CQ9P1W3 806 aa6.2□□□□□ -1.42
RIF1-209ENST00000467762 PALD1Q9ULE6 856 aa6.2□□□□□ -1.42
RIF1-209ENST00000467762 MAP3K2Q9Y2U5 619 aa6.2□□□□□ -1.42
RIF1-209ENST00000467762 KIF3AQ9Y496 699 aa6.2□□□□□ -1.42
RIF1-209ENST00000467762 SCN11AQ9UI33 1791 aa6.2□□□□□ -1.42
RIF1-209ENST00000467762 RPAP1Q9BWH6 1393 aaPredicted RBP6.19□□□□□ -1.42
RIF1-209ENST00000467762 TRPM3Q9HCF6 1732 aaPredicted RBP6.19□□□□□ -1.42
RIF1-209ENST00000467762 RGPD2P0DJD1 1756 aa6.19□□□□□ -1.42
RIF1-209ENST00000467762 GOLGA6L6A8MZA4 724 aa6.19□□□□□ -1.42
RIF1-209ENST00000467762 LZTS3O60299 673 aaPredicted RBP6.19□□□□□ -1.42
RIF1-209ENST00000467762 F13A1P00488 732 aa6.19□□□□□ -1.42
RIF1-209ENST00000467762 SYT1P21579 422 aa6.19□□□□□ -1.42
RIF1-209ENST00000467762 AK2P54819 239 aa6.19□□□□□ -1.42
RIF1-209ENST00000467762 ERVK-9P63128 1117 aa6.19□□□□□ -1.42
RIF1-209ENST00000467762 HMGN5P82970 282 aaKnown RBP6.19□□□□□ -1.42
RIF1-209ENST00000467762 HDLBPQ00341 1268 aaKnown RBP6.19□□□□□ -1.42
RIF1-209ENST00000467762 HSP90AA2PQ14568 343 aaPredicted RBP6.19□□□□□ -1.42
RIF1-209ENST00000467762 LRRFIP1Q32MZ4 808 aaKnown RBP6.19□□□□□ -1.42
RIF1-209ENST00000467762 CWC27Q6UX04 472 aaKnown RBP6.19□□□□□ -1.42
RIF1-209ENST00000467762 UNC5CLQ8IV45 518 aa6.19□□□□□ -1.42
RIF1-209ENST00000467762 ZSCAN29Q8IWY8 852 aaPredicted RBP6.19□□□□□ -1.42
RIF1-209ENST00000467762 CCDC155Q8N6L0 562 aa6.19□□□□□ -1.42
RIF1-209ENST00000467762 ANKRD24Q8TF21 1146 aa6.19□□□□□ -1.42
RIF1-209ENST00000467762 PDCL3Q9H2J4 239 aa6.19□□□□□ -1.42
RIF1-209ENST00000467762 COPRSQ9NQ92 184 aa6.19□□□□□ -1.42
RIF1-209ENST00000467762 MAGEC2Q9UBF1 373 aaPredicted RBP6.19□□□□□ -1.42
RIF1-209ENST00000467762 PRKAG2Q9UGJ0 569 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms