RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 TDO2P48775 406 aa8.18□□□□□ -1.1
SCAF4-204ENST00000467731 NFIAQ12857 509 aa8.18□□□□□ -1.1
SCAF4-204ENST00000467731 KIF4BQ2VIQ3 1234 aa8.18□□□□□ -1.1
SCAF4-204ENST00000467731 MAPKAPK5Q8IW41 473 aa8.18□□□□□ -1.1
SCAF4-204ENST00000467731 TRPM4Q8TD43 1214 aa8.18□□□□□ -1.1
SCAF4-204ENST00000467731 IPO4Q8TEX9 1081 aaKnown RBP8.18□□□□□ -1.1
SCAF4-204ENST00000467731 ZBED3Q96IU2 234 aaPredicted RBP8.18□□□□□ -1.1
SCAF4-204ENST00000467731 L3MBTL3Q96JM7 780 aaPredicted RBP8.18□□□□□ -1.1
SCAF4-204ENST00000467731 C22orf23Q9BZE7 217 aa8.18□□□□□ -1.1
SCAF4-204ENST00000467731 NAPBQ9H115 298 aa8.18□□□□□ -1.1
SCAF4-204ENST00000467731 DDX4Q9NQI0 724 aaKnown RBP8.18□□□□□ -1.1
SCAF4-204ENST00000467731 MKRN1Q9UHC7 482 aaKnown RBP8.18□□□□□ -1.1
SCAF4-204ENST00000467731 FLT1P17948 1338 aa8.18□□□□□ -1.1
SCAF4-204ENST00000467731 CLRN2A0PK11 232 aa8.18□□□□□ -1.1
SCAF4-204ENST00000467731 PICALMQ13492 652 aa8.18□□□□□ -1.1
SCAF4-204ENST00000467731 NECTIN1Q15223 517 aa8.18□□□□□ -1.1
SCAF4-204ENST00000467731 NACAP1Q9BZK3 213 aa8.18□□□□□ -1.1
SCAF4-204ENST00000467731 ATP8A2Q9NTI2 1148 aa8.18□□□□□ -1.1
SCAF4-204ENST00000467731 WDR90Q96KV7 1748 aa8.18□□□□□ -1.1
SCAF4-204ENST00000467731 RPAP1Q9BWH6 1393 aaPredicted RBP8.17□□□□□ -1.1
SCAF4-204ENST00000467731 ZMYM6O95789 1325 aa8.17□□□□□ -1.1
SCAF4-204ENST00000467731 MYO1BO43795 1136 aa8.17□□□□□ -1.1
SCAF4-204ENST00000467731 HSPA4P34932 840 aa8.17□□□□□ -1.1
SCAF4-204ENST00000467731 BBXQ8WY36 941 aaPredicted RBP8.17□□□□□ -1.1
SCAF4-204ENST00000467731 U3KPZ7 1027 aaPredicted RBP8.17□□□□□ -1.1
SCAF4-204ENST00000467731 CYP21A2P08686 494 aa8.17□□□□□ -1.1
SCAF4-204ENST00000467731 HAND2P61296 217 aa8.17□□□□□ -1.1
SCAF4-204ENST00000467731 ALX1Q15699 326 aa8.17□□□□□ -1.1
SCAF4-204ENST00000467731 SLC4A8Q2Y0W8 1093 aa8.17□□□□□ -1.1
SCAF4-204ENST00000467731 SPDYE2Q495Y8 402 aa8.17□□□□□ -1.1
SCAF4-204ENST00000467731 CREB3L3Q68CJ9 461 aa8.17□□□□□ -1.1
SCAF4-204ENST00000467731 GIMAP6Q6P9H5 292 aa8.17□□□□□ -1.1
SCAF4-204ENST00000467731 DDRGK1Q96HY6 314 aa8.17□□□□□ -1.1
SCAF4-204ENST00000467731 TBC1D32Q96NH3 1257 aa8.17□□□□□ -1.1
SCAF4-204ENST00000467731 VEZTQ9HBM0 779 aa8.17□□□□□ -1.1
SCAF4-204ENST00000467731 MCM9Q9NXL9 1143 aa8.17□□□□□ -1.1
SCAF4-204ENST00000467731 PALD1Q9ULE6 856 aa8.17□□□□□ -1.1
SCAF4-204ENST00000467731 ASTN2O75129 1339 aaPredicted RBP8.17□□□□□ -1.1
SCAF4-204ENST00000467731 HIRAP54198 1017 aaPredicted RBP8.16□□□□□ -1.1
SCAF4-204ENST00000467731 EVX2Q03828 476 aa8.16□□□□□ -1.1
SCAF4-204ENST00000467731 TCP10Q12799 353 aa8.16□□□□□ -1.1
SCAF4-204ENST00000467731 IDI2Q9BXS1 227 aa8.16□□□□□ -1.1
SCAF4-204ENST00000467731 ADARB2Q9NS39 739 aaKnown RBP8.16□□□□□ -1.1
SCAF4-204ENST00000467731 ZNF70Q9UC06 446 aaPredicted RBP8.16□□□□□ -1.1
SCAF4-204ENST00000467731 FAM198AQ9UFP1 575 aa8.16□□□□□ -1.1
SCAF4-204ENST00000467731 HACL1Q9UJ83 578 aa8.16□□□□□ -1.1
SCAF4-204ENST00000467731 TAF6LQ9Y6J9 622 aa8.16□□□□□ -1.1
SCAF4-204ENST00000467731 MYH8P13535 1937 aa8.16□□□□□ -1.1
SCAF4-204ENST00000467731 CYP2D7A0A087X1C5 515 aa8.16□□□□□ -1.1
SCAF4-204ENST00000467731 TCP10L2B9ZVM9 353 aa8.16□□□□□ -1.1
SCAF4-204ENST00000467731 USP17L12C9JPN9 530 aa8.16□□□□□ -1.1
SCAF4-204ENST00000467731 USP17L21D6R901 530 aa8.16□□□□□ -1.1
SCAF4-204ENST00000467731 SMIM22K7EJ46 135 aa8.16□□□□□ -1.1
SCAF4-204ENST00000467731 SLC27A2O14975 620 aa8.16□□□□□ -1.1
SCAF4-204ENST00000467731 MCCP23508 829 aa8.16□□□□□ -1.1
SCAF4-204ENST00000467731 RBM25P49756 843 aaKnown RBP8.16□□□□□ -1.1
SCAF4-204ENST00000467731 CTR9Q6PD62 1173 aa8.16□□□□□ -1.1
SCAF4-204ENST00000467731 RASEFQ8IZ41 740 aa8.16□□□□□ -1.1
SCAF4-204ENST00000467731 TMOD2Q9NZR1 351 aa8.16□□□□□ -1.1
SCAF4-204ENST00000467731 BCCIPQ9P287 314 aaKnown RBP eCLIP8.16□□□□□ -1.1
SCAF4-204ENST00000467731 SAP30BPQ9UHR5 308 aaKnown RBP8.16□□□□□ -1.1
SCAF4-204ENST00000467731 CTNNA3Q9UI47 895 aa8.16□□□□□ -1.1
SCAF4-204ENST00000467731 SCAF8Q9UPN6 1271 aaKnown RBP8.16□□□□□ -1.1
SCAF4-204ENST00000467731 SIPA1L1O43166 1804 aa8.16□□□□□ -1.1
SCAF4-204ENST00000467731 MINDY4BA8MYZ0 360 aa8.16□□□□□ -1.1
SCAF4-204ENST00000467731 POTECB2RU33 542 aa8.16□□□□□ -1.1
SCAF4-204ENST00000467731 ZNF213O14771 459 aa8.16□□□□□ -1.1
SCAF4-204ENST00000467731 IMMTQ16891 758 aaKnown RBP8.16□□□□□ -1.1
SCAF4-204ENST00000467731 ZFPM1Q8IX07 1006 aa8.16□□□□□ -1.1
SCAF4-204ENST00000467731 OSBPL5Q9H0X9 879 aaPredicted RBP8.16□□□□□ -1.1
SCAF4-204ENST00000467731 ARPP21Q9UBL0 812 aaPredicted RBP8.16□□□□□ -1.1
SCAF4-204ENST00000467731 IQCA1LA6NCM1 817 aa8.15□□□□□ -1.1
SCAF4-204ENST00000467731 EPHX2P34913 555 aa8.15□□□□□ -1.1
SCAF4-204ENST00000467731 RNF20Q5VTR2 975 aa8.15□□□□□ -1.1
SCAF4-204ENST00000467731 FAM43AQ8N2R8 423 aa8.15□□□□□ -1.1
SCAF4-204ENST00000467731 CNKSR2Q8WXI2 1034 aa8.15□□□□□ -1.1
SCAF4-204ENST00000467731 NBPF3Q9H094 633 aa8.15□□□□□ -1.1
SCAF4-204ENST00000467731 POLR3DP05423 398 aaPredicted RBP8.15□□□□□ -1.11
SCAF4-204ENST00000467731 CYP2D6P10635 497 aa8.15□□□□□ -1.11
SCAF4-204ENST00000467731 ZKSCAN1P17029 563 aaPredicted RBP8.15□□□□□ -1.11
SCAF4-204ENST00000467731 PLCD1P51178 756 aa8.15□□□□□ -1.11
SCAF4-204ENST00000467731 CTDSPL2Q05D32 466 aa8.15□□□□□ -1.11
SCAF4-204ENST00000467731 PPARAQ07869 468 aa8.15□□□□□ -1.11
SCAF4-204ENST00000467731 ANGEL2Q5VTE6 544 aaKnown RBP8.15□□□□□ -1.11
SCAF4-204ENST00000467731 STK11IPQ8N1F8 1099 aa8.15□□□□□ -1.11
SCAF4-204ENST00000467731 GGA3Q9NZ52 723 aa8.15□□□□□ -1.11
SCAF4-204ENST00000467731 SNX14Q9Y5W7 946 aa8.15□□□□□ -1.11
SCAF4-204ENST00000467731 CNTNAP1P78357 1384 aa8.15□□□□□ -1.11
SCAF4-204ENST00000467731 NPM3O75607 178 aaKnown RBP8.14□□□□□ -1.11
SCAF4-204ENST00000467731 ADCK5Q3MIX3 580 aa8.14□□□□□ -1.11
SCAF4-204ENST00000467731 SBK1Q52WX2 424 aa8.14□□□□□ -1.11
SCAF4-204ENST00000467731 C12orf60Q5U649 245 aa8.14□□□□□ -1.11
SCAF4-204ENST00000467731 FKBP1CQ5VVH2 108 aa8.14□□□□□ -1.11
SCAF4-204ENST00000467731 KCNB2Q92953 911 aa8.14□□□□□ -1.11
SCAF4-204ENST00000467731 KIF2CQ99661 725 aa8.14□□□□□ -1.11
SCAF4-204ENST00000467731 TAF1DQ9H5J8 278 aaPredicted RBP8.14□□□□□ -1.11
SCAF4-204ENST00000467731 DDTLA6NHG4 134 aaPredicted RBP8.14□□□□□ -1.11
SCAF4-204ENST00000467731 ENTPD3O75355 529 aa8.14□□□□□ -1.11
SCAF4-204ENST00000467731 ANAPC15P60006 121 aa8.14□□□□□ -1.11
SCAF4-204ENST00000467731 USP50Q70EL3 339 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms