RNA–Protein interactions for RNA: ENST00000467387.1

SPTA1-204, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 5

Gene SPTA1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-204ENST00000467387 ANKRD2Q9GZV1 360 aa9.51□□□□□ -0.89
SPTA1-204ENST00000467387 VEZTQ9HBM0 779 aa9.51□□□□□ -0.89
SPTA1-204ENST00000467387 BSDC1Q9NW68 430 aaPredicted RBP9.51□□□□□ -0.89
SPTA1-204ENST00000467387 MINPP1Q9UNW1 487 aa9.51□□□□□ -0.89
SPTA1-204ENST00000467387 ADAMTS8Q9UP79 889 aa9.51□□□□□ -0.89
SPTA1-204ENST00000467387 ZNF804BA4D1E1 1349 aa9.51□□□□□ -0.89
SPTA1-204ENST00000467387 WTIPA6NIX2 430 aaPredicted RBP9.5□□□□□ -0.89
SPTA1-204ENST00000467387 F8W031 263 aaPredicted RBP9.5□□□□□ -0.89
SPTA1-204ENST00000467387 MYO1BO43795 1136 aa9.5□□□□□ -0.89
SPTA1-204ENST00000467387 PPP1R12BO60237 982 aaPredicted RBP9.5□□□□□ -0.89
SPTA1-204ENST00000467387 ADH1BP00325 375 aa9.5□□□□□ -0.89
SPTA1-204ENST00000467387 KLRK1P26718 216 aa9.5□□□□□ -0.89
SPTA1-204ENST00000467387 GTF2IP78347 998 aa9.5□□□□□ -0.89
SPTA1-204ENST00000467387 TUSC1Q2TAM9 212 aa9.5□□□□□ -0.89
SPTA1-204ENST00000467387 TTLL5Q6EMB2 1281 aa9.5□□□□□ -0.89
SPTA1-204ENST00000467387 OTUD7BQ6GQQ9 843 aa9.5□□□□□ -0.89
SPTA1-204ENST00000467387 TTLL11Q8NHH1 800 aa9.5□□□□□ -0.89
SPTA1-204ENST00000467387 ERO1AQ96HE7 468 aa9.5□□□□□ -0.89
SPTA1-204ENST00000467387 ANP32EQ9BTT0 268 aa9.5□□□□□ -0.89
SPTA1-204ENST00000467387 FZD1Q9UP38 647 aa9.5□□□□□ -0.89
SPTA1-204ENST00000467387 LEMD3Q9Y2U8 911 aa9.5□□□□□ -0.89
SPTA1-204ENST00000467387 PI4KAP2A4QPH2 592 aa9.49□□□□□ -0.89
SPTA1-204ENST00000467387 APAF1O14727 1248 aa9.49□□□□□ -0.89
SPTA1-204ENST00000467387 FMNL1O95466 1100 aaPredicted RBP9.49□□□□□ -0.89
SPTA1-204ENST00000467387 MMP14P50281 582 aa9.49□□□□□ -0.89
SPTA1-204ENST00000467387 HNRNPUQ00839 825 aaKnown RBP eCLIP9.49□□□□□ -0.89
SPTA1-204ENST00000467387 SKIV2LQ15477 1246 aaKnown RBP9.49□□□□□ -0.89
SPTA1-204ENST00000467387 CWF19L2Q2TBE0 894 aaKnown RBP9.49□□□□□ -0.89
SPTA1-204ENST00000467387 KSR2Q6VAB6 950 aa9.49□□□□□ -0.89
SPTA1-204ENST00000467387 PI4KAP1Q8N8J0 262 aa9.49□□□□□ -0.89
SPTA1-204ENST00000467387 C8orf58Q8NAV2 365 aa9.49□□□□□ -0.89
SPTA1-204ENST00000467387 WNK4Q96J92 1243 aa9.49□□□□□ -0.89
SPTA1-204ENST00000467387 SPSB2Q99619 263 aa9.49□□□□□ -0.89
SPTA1-204ENST00000467387 DEFB129Q9H1M3 183 aa9.49□□□□□ -0.89
SPTA1-204ENST00000467387 R3HDMLQ9H3Y0 253 aa9.49□□□□□ -0.89
SPTA1-204ENST00000467387 GOPCQ9HD26 462 aa9.49□□□□□ -0.89
SPTA1-204ENST00000467387 CHMP3Q9Y3E7 222 aa9.49□□□□□ -0.89
SPTA1-204ENST00000467387 PCDHB15Q9Y5E8 787 aa9.49□□□□□ -0.89
SPTA1-204ENST00000467387 CLRN2A0PK11 232 aa9.48□□□□□ -0.89
SPTA1-204ENST00000467387 IGKV5-2P06315 115 aa9.48□□□□□ -0.89
SPTA1-204ENST00000467387 ZNF853P0CG23 659 aa9.48□□□□□ -0.89
SPTA1-204ENST00000467387 ZBTB48P10074 688 aaPredicted RBP9.48□□□□□ -0.89
SPTA1-204ENST00000467387 ITGA6P23229 1130 aa9.48□□□□□ -0.89
SPTA1-204ENST00000467387 IREB2P48200 963 aaKnown RBP9.48□□□□□ -0.89
SPTA1-204ENST00000467387 RBM5P52756 815 aaKnown RBP eCLIP9.48□□□□□ -0.89
SPTA1-204ENST00000467387 LDLRAD1Q5T700 205 aa9.48□□□□□ -0.89
SPTA1-204ENST00000467387 INTS3Q68E01 1043 aaKnown RBP9.48□□□□□ -0.89
SPTA1-204ENST00000467387 OTOP1Q7RTM1 612 aa9.48□□□□□ -0.89
SPTA1-204ENST00000467387 TXNRD3Q86VQ6 643 aa9.48□□□□□ -0.89
SPTA1-204ENST00000467387 CD99L2Q8TCZ2 262 aa9.48□□□□□ -0.89
SPTA1-204ENST00000467387 CLMNQ96JQ2 1002 aa9.48□□□□□ -0.89
SPTA1-204ENST00000467387 CFHR5Q9BXR6 569 aa9.48□□□□□ -0.89
SPTA1-204ENST00000467387 MYH16Q9H6N6 1097 aa9.48□□□□□ -0.89
SPTA1-204ENST00000467387 POLR3EQ9NVU0 708 aa9.48□□□□□ -0.89
SPTA1-204ENST00000467387 PPP2R3BQ9Y5P8 575 aa9.48□□□□□ -0.89
SPTA1-204ENST00000467387 MYH3P11055 1940 aa9.48□□□□□ -0.89
SPTA1-204ENST00000467387 SSC5DA1L4H1 1573 aa9.47□□□□□ -0.89
SPTA1-204ENST00000467387 NEURL1BA8MQ27 555 aa9.47□□□□□ -0.89
SPTA1-204ENST00000467387 IGF2BP3O00425 579 aaKnown RBP eCLIP9.47□□□□□ -0.89
SPTA1-204ENST00000467387 INHBEP58166 350 aa9.47□□□□□ -0.89
SPTA1-204ENST00000467387 CRHR2Q13324 411 aa9.47□□□□□ -0.89
SPTA1-204ENST00000467387 SUPT20HL1Q3ZLR7 823 aa9.47□□□□□ -0.89
SPTA1-204ENST00000467387 TAF7LQ5H9L4 462 aa9.47□□□□□ -0.89
SPTA1-204ENST00000467387 ZNF804AQ7Z570 1209 aa9.47□□□□□ -0.89
SPTA1-204ENST00000467387 EFCC1Q9HA90 598 aa9.47□□□□□ -0.89
SPTA1-204ENST00000467387 JAG2Q9Y219 1238 aa9.47□□□□□ -0.89
SPTA1-204ENST00000467387 ZBED9Q6R2W3 1325 aa9.47□□□□□ -0.89
SPTA1-204ENST00000467387 ANKRD18BA2A2Z9 1011 aa9.46□□□□□ -0.9
SPTA1-204ENST00000467387 CHRNDQ07001 517 aa9.46□□□□□ -0.9
SPTA1-204ENST00000467387 FKBP5Q13451 457 aaPredicted RBP9.46□□□□□ -0.9
SPTA1-204ENST00000467387 CFAP100Q494V2 611 aa9.46□□□□□ -0.9
SPTA1-204ENST00000467387 MSS51Q4VC12 460 aa9.46□□□□□ -0.9
SPTA1-204ENST00000467387 HABP4Q5JVS0 413 aaKnown RBP9.46□□□□□ -0.9
SPTA1-204ENST00000467387 FAM160A2Q8N612 972 aaPredicted RBP9.46□□□□□ -0.9
SPTA1-204ENST00000467387 SYMPKQ92797 1274 aaKnown RBP9.46□□□□□ -0.9
SPTA1-204ENST00000467387 TSR2Q969E8 191 aaKnown RBP9.46□□□□□ -0.9
SPTA1-204ENST00000467387 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.46□□□□□ -0.9
SPTA1-204ENST00000467387 PRKRIP1Q9H875 184 aaPredicted RBP9.46□□□□□ -0.9
SPTA1-204ENST00000467387 ELP3Q9H9T3 547 aa9.46□□□□□ -0.9
SPTA1-204ENST00000467387 ZNF646O15015 1829 aaPredicted RBP9.45□□□□□ -0.9
SPTA1-204ENST00000467387 WDHD1O75717 1129 aaPredicted RBP9.45□□□□□ -0.9
SPTA1-204ENST00000467387 MYCP01106 439 aaPredicted RBP9.45□□□□□ -0.9
SPTA1-204ENST00000467387 MTMR2Q13614 643 aa9.45□□□□□ -0.9
SPTA1-204ENST00000467387 TNFAIP1Q13829 316 aa9.45□□□□□ -0.9
SPTA1-204ENST00000467387 GCKRQ14397 625 aa9.45□□□□□ -0.9
SPTA1-204ENST00000467387 ARHGEF6Q15052 776 aa9.45□□□□□ -0.9
SPTA1-204ENST00000467387 SLC9C1Q4G0N8 1177 aa9.45□□□□□ -0.9
SPTA1-204ENST00000467387 RETREG3Q86VR2 466 aa9.45□□□□□ -0.9
SPTA1-204ENST00000467387 ANKRD13AQ8IZ07 590 aa9.45□□□□□ -0.9
SPTA1-204ENST00000467387 TSPYL6Q8N831 410 aa9.45□□□□□ -0.9
SPTA1-204ENST00000467387 HELBQ8NG08 1087 aaPredicted RBP9.45□□□□□ -0.9
SPTA1-204ENST00000467387 USB1Q9BQ65 265 aaKnown RBP9.45□□□□□ -0.9
SPTA1-204ENST00000467387 CD209Q9NNX6 404 aa9.45□□□□□ -0.9
SPTA1-204ENST00000467387 PTPN22Q9Y2R2 807 aa9.45□□□□□ -0.9
SPTA1-204ENST00000467387 H7C1W4 665 aa9.44□□□□□ -0.9
SPTA1-204ENST00000467387 LILRB3O75022 631 aa9.44□□□□□ -0.9
SPTA1-204ENST00000467387 TAF5LO75529 589 aa9.44□□□□□ -0.9
SPTA1-204ENST00000467387 SP3Q02447 781 aa9.44□□□□□ -0.9
SPTA1-204ENST00000467387 IFIT5Q13325 482 aaKnown RBP9.44□□□□□ -0.9
SPTA1-204ENST00000467387 QPCTQ16769 361 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms