RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 ZPR1O75312 459 aa17.08■□□□□ 0.32
PRPF38B-204ENST00000467302 PTPN14Q15678 1187 aa17.08■□□□□ 0.32
PRPF38B-204ENST00000467302 TBC1D9BQ66K14 1250 aa17.08■□□□□ 0.32
PRPF38B-204ENST00000467302 BICDL1Q6ZP65 573 aa17.08■□□□□ 0.32
PRPF38B-204ENST00000467302 CCAR2Q8N163 923 aaKnown RBP17.08■□□□□ 0.32
PRPF38B-204ENST00000467302 PIH1D3Q9NQM4 214 aaKnown RBP17.08■□□□□ 0.32
PRPF38B-204ENST00000467302 ADD2P35612 726 aa17.07■□□□□ 0.32
PRPF38B-204ENST00000467302 NAA30Q147X3 362 aaPredicted RBP17.07■□□□□ 0.32
PRPF38B-204ENST00000467302 SF3A1Q15459 793 aaKnown RBP17.07■□□□□ 0.32
PRPF38B-204ENST00000467302 SLC10A5Q5PT55 438 aa17.07■□□□□ 0.32
PRPF38B-204ENST00000467302 AXDND1Q5T1B0 1012 aaPredicted RBP17.07■□□□□ 0.32
PRPF38B-204ENST00000467302 SLC9C2Q5TAH2 1124 aa17.07■□□□□ 0.32
PRPF38B-204ENST00000467302 SMIM5Q71RC9 77 aa17.07■□□□□ 0.32
PRPF38B-204ENST00000467302 NCOA7Q8NI08 942 aa17.07■□□□□ 0.32
PRPF38B-204ENST00000467302 SPDYE4A6NLX3 237 aa17.06■□□□□ 0.32
PRPF38B-204ENST00000467302 KIF28PB7ZC32 967 aa17.06■□□□□ 0.32
PRPF38B-204ENST00000467302 IDH1O75874 414 aaKnown RBP17.06■□□□□ 0.32
PRPF38B-204ENST00000467302 GTF2E1P29083 439 aaPredicted RBP17.06■□□□□ 0.32
PRPF38B-204ENST00000467302 SNAP23O00161 211 aa17.06■□□□□ 0.32
PRPF38B-204ENST00000467302 GPAA1O43292 621 aa17.06■□□□□ 0.32
PRPF38B-204ENST00000467302 ZNF202O95125 648 aa17.06■□□□□ 0.32
PRPF38B-204ENST00000467302 KIF23Q02241 960 aaPredicted RBP17.06■□□□□ 0.32
PRPF38B-204ENST00000467302 UBE3CQ15386 1083 aa17.06■□□□□ 0.32
PRPF38B-204ENST00000467302 SPATA5Q8NB90 893 aa17.06■□□□□ 0.32
PRPF38B-204ENST00000467302 FBXW7Q969H0 707 aa17.06■□□□□ 0.32
PRPF38B-204ENST00000467302 SETDB2Q96T68 719 aa17.06■□□□□ 0.32
PRPF38B-204ENST00000467302 BCL11BQ9C0K0 894 aaPredicted RBP17.06■□□□□ 0.32
PRPF38B-204ENST00000467302 GJB4Q9NTQ9 266 aa17.06■□□□□ 0.32
PRPF38B-204ENST00000467302 COL4A1P02462 1669 aa17.05■□□□□ 0.32
PRPF38B-204ENST00000467302 CMA1P23946 247 aa17.05■□□□□ 0.32
PRPF38B-204ENST00000467302 CHRNDQ07001 517 aa17.05■□□□□ 0.32
PRPF38B-204ENST00000467302 ANO1Q5XXA6 986 aa17.05■□□□□ 0.32
PRPF38B-204ENST00000467302 ANKRD18AQ8IVF6 992 aa17.05■□□□□ 0.32
PRPF38B-204ENST00000467302 ZNF592Q92610 1267 aa17.05■□□□□ 0.32
PRPF38B-204ENST00000467302 CGNQ9P2M7 1197 aaKnown RBP17.05■□□□□ 0.32
PRPF38B-204ENST00000467302 SRP68Q9UHB9 627 aaKnown RBP17.05■□□□□ 0.32
PRPF38B-204ENST00000467302 MYO5AQ9Y4I1 1855 aaKnown RBP17.04■□□□□ 0.32
PRPF38B-204ENST00000467302 SLC3A2P08195 630 aaKnown RBP17.04■□□□□ 0.32
PRPF38B-204ENST00000467302 NLRP12P59046 1061 aa17.04■□□□□ 0.32
PRPF38B-204ENST00000467302 NCAPHQ15003 741 aa17.04■□□□□ 0.32
PRPF38B-204ENST00000467302 GTPBP4Q9BZE4 634 aaKnown RBP17.04■□□□□ 0.32
PRPF38B-204ENST00000467302 NBPF3Q9H094 633 aa17.04■□□□□ 0.32
PRPF38B-204ENST00000467302 ZNF213O14771 459 aa17.04■□□□□ 0.32
PRPF38B-204ENST00000467302 CPLX1O14810 134 aa17.04■□□□□ 0.32
PRPF38B-204ENST00000467302 RALYLQ86SE5 291 aaKnown RBP17.04■□□□□ 0.32
PRPF38B-204ENST00000467302 XPO4Q9C0E2 1151 aaKnown RBP17.04■□□□□ 0.32
PRPF38B-204ENST00000467302 TRMT1Q9NXH9 659 aaKnown RBP17.04■□□□□ 0.32
PRPF38B-204ENST00000467302 OGFRQ9NZT2 677 aa17.04■□□□□ 0.32
PRPF38B-204ENST00000467302 PFKFB1P16118 471 aa17.03■□□□□ 0.32
PRPF38B-204ENST00000467302 PDE6AP16499 860 aa17.03■□□□□ 0.32
PRPF38B-204ENST00000467302 RASGRF1Q13972 1273 aa17.03■□□□□ 0.32
PRPF38B-204ENST00000467302 SLC39A14Q15043 492 aa17.03■□□□□ 0.32
PRPF38B-204ENST00000467302 SYNE3Q6ZMZ3 975 aa17.03■□□□□ 0.32
PRPF38B-204ENST00000467302 C3orf67Q6ZVT6 689 aa17.03■□□□□ 0.32
PRPF38B-204ENST00000467302 NBPF5PQ86XG9 351 aaPredicted RBP17.03■□□□□ 0.32
PRPF38B-204ENST00000467302 ZNF532Q9HCE3 1301 aa17.03■□□□□ 0.32
PRPF38B-204ENST00000467302 WDHD1O75717 1129 aaPredicted RBP17.03■□□□□ 0.32
PRPF38B-204ENST00000467302 BCAMP50895 628 aa17.03■□□□□ 0.32
PRPF38B-204ENST00000467302 ZRSR1Q15695 479 aaKnown RBP17.03■□□□□ 0.32
PRPF38B-204ENST00000467302 E4F1Q66K89 784 aaPredicted RBP17.03■□□□□ 0.32
PRPF38B-204ENST00000467302 ARMCX5Q6P1M9 558 aa17.03■□□□□ 0.32
PRPF38B-204ENST00000467302 RAB11FIP4Q86YS3 637 aa17.03■□□□□ 0.32
PRPF38B-204ENST00000467302 CCDC150Q8NCX0 1101 aa17.03■□□□□ 0.32
PRPF38B-204ENST00000467302 ARHGEF1Q92888 912 aaKnown RBP17.03■□□□□ 0.32
PRPF38B-204ENST00000467302 QTRT2Q9H974 415 aaKnown RBP17.03■□□□□ 0.32
PRPF38B-204ENST00000467302 BSDC1Q9NW68 430 aaPredicted RBP17.03■□□□□ 0.32
PRPF38B-204ENST00000467302 IFNKQ9P0W0 207 aa17.03■□□□□ 0.32
PRPF38B-204ENST00000467302 ZNF215Q9UL58 517 aaPredicted RBP17.03■□□□□ 0.32
PRPF38B-204ENST00000467302 MROH7-TTC4A0A0A0MT08 1334 aa17.02■□□□□ 0.32
PRPF38B-204ENST00000467302 KIF2AO00139 706 aaPredicted RBP17.02■□□□□ 0.32
PRPF38B-204ENST00000467302 ZMYM6O95789 1325 aa17.02■□□□□ 0.32
PRPF38B-204ENST00000467302 KCNJ6P48051 423 aa17.02■□□□□ 0.32
PRPF38B-204ENST00000467302 MAP3K12Q12852 859 aa17.02■□□□□ 0.32
PRPF38B-204ENST00000467302 KIF18AQ8NI77 898 aa17.02■□□□□ 0.32
PRPF38B-204ENST00000467302 TIGD1Q96MW7 591 aa17.02■□□□□ 0.32
PRPF38B-204ENST00000467302 WWC3Q9ULE0 1092 aa17.02■□□□□ 0.32
PRPF38B-204ENST00000467302 BRWD3Q6RI45 1802 aa17.01■□□□□ 0.31
PRPF38B-204ENST00000467302 IKBKBO14920 756 aa17.01■□□□□ 0.31
PRPF38B-204ENST00000467302 TPTE2Q6XPS3 522 aa17.01■□□□□ 0.31
PRPF38B-204ENST00000467302 DDX41Q9UJV9 622 aaKnown RBP17.01■□□□□ 0.31
PRPF38B-204ENST00000467302 ANGEL1Q9UNK9 670 aaKnown RBP17.01■□□□□ 0.31
PRPF38B-204ENST00000467302 HPSEQ9Y251 543 aa17.01■□□□□ 0.31
PRPF38B-204ENST00000467302 UBR3Q6ZT12 1888 aa17.01■□□□□ 0.31
PRPF38B-204ENST00000467302 TCRBV5S4A2TA0A5A2 114 aa17.01■□□□□ 0.31
PRPF38B-204ENST00000467302 BIN1O00499 593 aa17.01■□□□□ 0.31
PRPF38B-204ENST00000467302 SMC2O95347 1197 aa17.01■□□□□ 0.31
PRPF38B-204ENST00000467302 ADRA2BP18089 450 aa17.01■□□□□ 0.31
PRPF38B-204ENST00000467302 RFC4P35249 363 aa17.01■□□□□ 0.31
PRPF38B-204ENST00000467302 TRAPPC3LQ5T215 181 aa17.01■□□□□ 0.31
PRPF38B-204ENST00000467302 NKX2-3Q8TAU0 364 aa17.01■□□□□ 0.31
PRPF38B-204ENST00000467302 NLRP3Q96P20 1036 aa17.01■□□□□ 0.31
PRPF38B-204ENST00000467302 HSD3B7Q9H2F3 369 aa17.01■□□□□ 0.31
PRPF38B-204ENST00000467302 TUBE1Q9UJT0 475 aa17.01■□□□□ 0.31
PRPF38B-204ENST00000467302 DENND2AQ9ULE3 1009 aa17.01■□□□□ 0.31
PRPF38B-204ENST00000467302 TAF1P21675 1872 aa17.01■□□□□ 0.31
PRPF38B-204ENST00000467302 FAM237AA0A1B0GTK4 181 aa17■□□□□ 0.31
PRPF38B-204ENST00000467302 DHX8Q14562 1220 aaKnown RBP17■□□□□ 0.31
PRPF38B-204ENST00000467302 TMC6Q7Z403 805 aa17■□□□□ 0.31
PRPF38B-204ENST00000467302 TBC1D10CQ8IV04 446 aa17■□□□□ 0.31
PRPF38B-204ENST00000467302 ERO1AQ96HE7 468 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms