RNA–Protein interactions for RNA: ENST00000466141.1

RPUSD3-212, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 996 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-212ENST00000466141 SOX1O00570 391 aaPredicted RBP8.86□□□□□ -0.99
RPUSD3-212ENST00000466141 ALDH1L1O75891 902 aa8.86□□□□□ -0.99
RPUSD3-212ENST00000466141 IREB2P48200 963 aaKnown RBP8.86□□□□□ -0.99
RPUSD3-212ENST00000466141 MTFR1Q15390 333 aa8.86□□□□□ -0.99
RPUSD3-212ENST00000466141 TAF1CQ15572 869 aaPredicted RBP8.86□□□□□ -0.99
RPUSD3-212ENST00000466141 FOXD4L6Q3SYB3 417 aaPredicted RBP8.86□□□□□ -0.99
RPUSD3-212ENST00000466141 CFAP100Q494V2 611 aa8.86□□□□□ -0.99
RPUSD3-212ENST00000466141 GORABQ5T7V8 394 aa8.86□□□□□ -0.99
RPUSD3-212ENST00000466141 FOXD4L3Q6VB84 417 aaPredicted RBP8.86□□□□□ -0.99
RPUSD3-212ENST00000466141 TTLL11Q8NHH1 800 aa8.86□□□□□ -0.99
RPUSD3-212ENST00000466141 MS4A4AQ96JQ5 239 aa8.86□□□□□ -0.99
RPUSD3-212ENST00000466141 PRMT6Q96LA8 375 aaPredicted RBP8.86□□□□□ -0.99
RPUSD3-212ENST00000466141 BSDC1Q9NW68 430 aaPredicted RBP8.86□□□□□ -0.99
RPUSD3-212ENST00000466141 JAG2Q9Y219 1238 aa8.86□□□□□ -0.99
RPUSD3-212ENST00000466141 UTYO14607 1347 aa8.85□□□□□ -0.99
RPUSD3-212ENST00000466141 ECM29Q5VYK3 1845 aa8.85□□□□□ -0.99
RPUSD3-212ENST00000466141 CCL15-CCL14A0A0B4J2E2 113 aa8.85□□□□□ -0.99
RPUSD3-212ENST00000466141 GRM8O00222 908 aa8.85□□□□□ -0.99
RPUSD3-212ENST00000466141 BRD1O95696 1058 aa8.85□□□□□ -0.99
RPUSD3-212ENST00000466141 RASA3Q14644 834 aa8.85□□□□□ -0.99
RPUSD3-212ENST00000466141 CCL15Q16663 113 aa8.85□□□□□ -0.99
RPUSD3-212ENST00000466141 SUPT20HL1Q3ZLR7 823 aa8.85□□□□□ -0.99
RPUSD3-212ENST00000466141 MKL1Q969V6 931 aa8.85□□□□□ -0.99
RPUSD3-212ENST00000466141 LRCH3Q96II8 777 aa8.85□□□□□ -0.99
RPUSD3-212ENST00000466141 SRCIN1Q9C0H9 1055 aa8.85□□□□□ -0.99
RPUSD3-212ENST00000466141 PRO3102Q9H379 93 aa8.85□□□□□ -0.99
RPUSD3-212ENST00000466141 PPP2R3BQ9Y5P8 575 aa8.85□□□□□ -0.99
RPUSD3-212ENST00000466141 SPDYE2BA6NHP3 402 aa8.84□□□□□ -0.99
RPUSD3-212ENST00000466141 KIF20AO95235 890 aa8.84□□□□□ -0.99
RPUSD3-212ENST00000466141 SPDYE6P0CI01 402 aa8.84□□□□□ -0.99
RPUSD3-212ENST00000466141 ARID4AP29374 1257 aaPredicted RBP8.84□□□□□ -0.99
RPUSD3-212ENST00000466141 DNTTIP2Q5QJE6 756 aaKnown RBP8.84□□□□□ -0.99
RPUSD3-212ENST00000466141 SLC4A10Q6U841 1118 aa8.84□□□□□ -0.99
RPUSD3-212ENST00000466141 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.84□□□□□ -0.99
RPUSD3-212ENST00000466141 SDR16C5Q8N3Y7 309 aa8.84□□□□□ -0.99
RPUSD3-212ENST00000466141 MTMR14Q8NCE2 650 aa8.84□□□□□ -0.99
RPUSD3-212ENST00000466141 ARAP2Q8WZ64 1704 aa8.84□□□□□ -0.99
RPUSD3-212ENST00000466141 TSPAN18Q96SJ8 248 aa8.84□□□□□ -0.99
RPUSD3-212ENST00000466141 ZFYVE28Q9HCC9 887 aa8.84□□□□□ -0.99
RPUSD3-212ENST00000466141 CD209Q9NNX6 404 aa8.84□□□□□ -0.99
RPUSD3-212ENST00000466141 LEMD3Q9Y2U8 911 aa8.84□□□□□ -0.99
RPUSD3-212ENST00000466141 MYH13Q9UKX3 1938 aa8.84□□□□□ -1
RPUSD3-212ENST00000466141 GOLGA6L3A6NEY3 463 aa8.83□□□□□ -1
RPUSD3-212ENST00000466141 STK25O00506 426 aa8.83□□□□□ -1
RPUSD3-212ENST00000466141 BCAR3O75815 825 aa8.83□□□□□ -1
RPUSD3-212ENST00000466141 CTGFP29279 349 aa8.83□□□□□ -1
RPUSD3-212ENST00000466141 HOXD11P31277 338 aaPredicted RBP8.83□□□□□ -1
RPUSD3-212ENST00000466141 RBM5P52756 815 aaKnown RBP eCLIP8.83□□□□□ -1
RPUSD3-212ENST00000466141 LACTBP83111 547 aaPredicted RBP8.83□□□□□ -1
RPUSD3-212ENST00000466141 FOXO4P98177 505 aa8.83□□□□□ -1
RPUSD3-212ENST00000466141 VGLL4Q14135 290 aa8.83□□□□□ -1
RPUSD3-212ENST00000466141 EPHA10Q5JZY3 1008 aa8.83□□□□□ -1
RPUSD3-212ENST00000466141 ARHGAP45Q92619 1136 aa8.83□□□□□ -1
RPUSD3-212ENST00000466141 DDRGK1Q96HY6 314 aa8.83□□□□□ -1
RPUSD3-212ENST00000466141 KAZALD1Q96I82 304 aa8.83□□□□□ -1
RPUSD3-212ENST00000466141 API5Q9BZZ5 524 aaKnown RBP8.83□□□□□ -1
RPUSD3-212ENST00000466141 RAI14Q9P0K7 980 aa8.83□□□□□ -1
RPUSD3-212ENST00000466141 FEZ2Q9UHY8 353 aaPredicted RBP8.83□□□□□ -1
RPUSD3-212ENST00000466141 NOB1Q9ULX3 412 aaKnown RBP8.83□□□□□ -1
RPUSD3-212ENST00000466141 NUB1Q9Y5A7 615 aa8.83□□□□□ -1
RPUSD3-212ENST00000466141 IRS2Q9Y4H2 1338 aa8.82□□□□□ -1
RPUSD3-212ENST00000466141 TPD52L2O43399 206 aaKnown RBP8.82□□□□□ -1
RPUSD3-212ENST00000466141 MYO1BO43795 1136 aa8.82□□□□□ -1
RPUSD3-212ENST00000466141 TAF5LO75529 589 aa8.82□□□□□ -1
RPUSD3-212ENST00000466141 CSF1RP07333 972 aa8.82□□□□□ -1
RPUSD3-212ENST00000466141 TRIM27P14373 513 aa8.82□□□□□ -1
RPUSD3-212ENST00000466141 IGHMBP2P38935 993 aaKnown RBP8.82□□□□□ -1
RPUSD3-212ENST00000466141 KCNJ4P48050 445 aa8.82□□□□□ -1
RPUSD3-212ENST00000466141 CHRNDQ07001 517 aa8.82□□□□□ -1
RPUSD3-212ENST00000466141 SEMA3FQ13275 785 aa8.82□□□□□ -1
RPUSD3-212ENST00000466141 ARHGEF6Q15052 776 aa8.82□□□□□ -1
RPUSD3-212ENST00000466141 PPP4R3BQ5MIZ7 849 aa8.82□□□□□ -1
RPUSD3-212ENST00000466141 UBE2Q1Q7Z7E8 422 aa8.82□□□□□ -1
RPUSD3-212ENST00000466141 HELBQ8NG08 1087 aaPredicted RBP8.82□□□□□ -1
RPUSD3-212ENST00000466141 SREK1Q8WXA9 508 aaKnown RBP8.82□□□□□ -1
RPUSD3-212ENST00000466141 SUCLG2Q96I99 432 aa8.82□□□□□ -1
RPUSD3-212ENST00000466141 TEPSINQ96N21 525 aa8.82□□□□□ -1
RPUSD3-212ENST00000466141 RBM28Q9NW13 759 aaKnown RBP8.82□□□□□ -1
RPUSD3-212ENST00000466141 TNNQ9UQP3 1299 aa8.82□□□□□ -1
RPUSD3-212ENST00000466141 RBM47A0AV96 593 aaKnown RBP8.81□□□□□ -1
RPUSD3-212ENST00000466141 BTBD19C9JJ37 291 aa8.81□□□□□ -1
RPUSD3-212ENST00000466141 ZBTB7BO15156 539 aaPredicted RBP8.81□□□□□ -1
RPUSD3-212ENST00000466141 TLR2O60603 784 aa8.81□□□□□ -1
RPUSD3-212ENST00000466141 TPM2P07951 284 aa8.81□□□□□ -1
RPUSD3-212ENST00000466141 NBPF7P0C2Y1 421 aaPredicted RBP8.81□□□□□ -1
RPUSD3-212ENST00000466141 ITGA6P23229 1130 aa8.81□□□□□ -1
RPUSD3-212ENST00000466141 MNX1P50219 401 aaPredicted RBP8.81□□□□□ -1
RPUSD3-212ENST00000466141 GTF2A2P52657 109 aa8.81□□□□□ -1
RPUSD3-212ENST00000466141 ZKSCAN8Q15776 578 aaPredicted RBP8.81□□□□□ -1
RPUSD3-212ENST00000466141 TSR1Q2NL82 804 aaKnown RBP8.81□□□□□ -1
RPUSD3-212ENST00000466141 RABL6Q3YEC7 729 aaPredicted RBP8.81□□□□□ -1
RPUSD3-212ENST00000466141 ATF7IPQ6VMQ6 1270 aa8.81□□□□□ -1
RPUSD3-212ENST00000466141 ANKRD44Q8N8A2 993 aa8.81□□□□□ -1
RPUSD3-212ENST00000466141 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.81□□□□□ -1
RPUSD3-212ENST00000466141 TMEM39BQ9GZU3 492 aa8.81□□□□□ -1
RPUSD3-212ENST00000466141 ANKRD2Q9GZV1 360 aa8.81□□□□□ -1
RPUSD3-212ENST00000466141 USP44Q9H0E7 712 aa8.81□□□□□ -1
RPUSD3-212ENST00000466141 TDRD3Q9H7E2 651 aaKnown RBP8.81□□□□□ -1
RPUSD3-212ENST00000466141 C9orf78Q9NZ63 289 aaPredicted RBP8.81□□□□□ -1
RPUSD3-212ENST00000466141 ZNF70Q9UC06 446 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms