RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 BCL7CQ8WUZ0 217 aaPredicted RBP9.87□□□□□ -0.83
SMC4-205ENST00000465563 SRCIN1Q9C0H9 1055 aa9.87□□□□□ -0.83
SMC4-205ENST00000465563 MAPK8P45983 427 aa9.86□□□□□ -0.83
SMC4-205ENST00000465563 COL19A1Q14993 1142 aa9.86□□□□□ -0.83
SMC4-205ENST00000465563 ZC3H12AQ5D1E8 599 aaKnown RBP9.86□□□□□ -0.83
SMC4-205ENST00000465563 NECAB3Q96P71 396 aaPredicted RBP9.86□□□□□ -0.83
SMC4-205ENST00000465563 CEP44Q9C0F1 390 aa9.86□□□□□ -0.83
SMC4-205ENST00000465563 CBX8Q9HC52 389 aa9.86□□□□□ -0.83
SMC4-205ENST00000465563 SSU72Q9NP77 194 aaKnown RBP9.86□□□□□ -0.83
SMC4-205ENST00000465563 ERVK-24P63145 666 aa9.85□□□□□ -0.83
SMC4-205ENST00000465563 ZNF252P-AS1Q0IIN9 211 aa9.85□□□□□ -0.83
SMC4-205ENST00000465563 RNF214Q8ND24 703 aa9.85□□□□□ -0.83
SMC4-205ENST00000465563 GPBAR1Q8TDU6 330 aa9.85□□□□□ -0.83
SMC4-205ENST00000465563 MISP3Q96FF7 219 aa9.85□□□□□ -0.83
SMC4-205ENST00000465563 ACSBG1Q96GR2 724 aa9.85□□□□□ -0.83
SMC4-205ENST00000465563 SAMM50Q9Y512 469 aa9.85□□□□□ -0.83
SMC4-205ENST00000465563 NEFMP07197 916 aa9.84□□□□□ -0.83
SMC4-205ENST00000465563 FMR1Q06787 632 aaKnown RBP eCLIP9.84□□□□□ -0.83
SMC4-205ENST00000465563 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.84□□□□□ -0.83
SMC4-205ENST00000465563 NETO1Q8TDF5 533 aa9.84□□□□□ -0.83
SMC4-205ENST00000465563 ISL2Q96A47 359 aa9.84□□□□□ -0.83
SMC4-205ENST00000465563 PPM1HQ9ULR3 514 aa9.84□□□□□ -0.83
SMC4-205ENST00000465563 GIPC1O14908 333 aa9.83□□□□□ -0.84
SMC4-205ENST00000465563 ALG1LQ6GMV1 187 aa9.83□□□□□ -0.84
SMC4-205ENST00000465563 TPTE2Q6XPS3 522 aa9.83□□□□□ -0.84
SMC4-205ENST00000465563 PLD6Q8N2A8 252 aaKnown RBP9.83□□□□□ -0.84
SMC4-205ENST00000465563 FAM181AQ8N9Y4 354 aa9.83□□□□□ -0.84
SMC4-205ENST00000465563 DUSP23Q9BVJ7 150 aa9.83□□□□□ -0.84
SMC4-205ENST00000465563 IVNS1ABPQ9Y6Y0 642 aa9.83□□□□□ -0.84
SMC4-205ENST00000465563 LEFTY1O75610 366 aa9.82□□□□□ -0.84
SMC4-205ENST00000465563 ZNF574Q6ZN55 896 aaPredicted RBP9.82□□□□□ -0.84
SMC4-205ENST00000465563 SPRED2Q7Z698 418 aa9.82□□□□□ -0.84
SMC4-205ENST00000465563 ASIC4Q96FT7 647 aa9.82□□□□□ -0.84
SMC4-205ENST00000465563 ASB16Q96NS5 453 aa9.82□□□□□ -0.84
SMC4-205ENST00000465563 OSBPL7Q9BZF2 842 aa9.82□□□□□ -0.84
SMC4-205ENST00000465563 CACNA2D2Q9NY47 1150 aa9.82□□□□□ -0.84
SMC4-205ENST00000465563 ENC1O14682 589 aa9.81□□□□□ -0.84
SMC4-205ENST00000465563 JUNBP17275 347 aaPredicted RBP9.81□□□□□ -0.84
SMC4-205ENST00000465563 ITGB5P18084 799 aa9.81□□□□□ -0.84
SMC4-205ENST00000465563 BMP6P22004 513 aa9.81□□□□□ -0.84
SMC4-205ENST00000465563 PLCL1Q15111 1095 aa9.81□□□□□ -0.84
SMC4-205ENST00000465563 ARHGAP27Q6ZUM4 889 aa9.81□□□□□ -0.84
SMC4-205ENST00000465563 GRIN3AQ8TCU5 1115 aa9.81□□□□□ -0.84
SMC4-205ENST00000465563 MKNK2Q9HBH9 465 aa9.81□□□□□ -0.84
SMC4-205ENST00000465563 YBX3P16989 372 aaKnown RBP eCLIP9.8□□□□□ -0.84
SMC4-205ENST00000465563 ATP2B2Q01814 1243 aa9.8□□□□□ -0.84
SMC4-205ENST00000465563 KCNA1Q09470 495 aa9.8□□□□□ -0.84
SMC4-205ENST00000465563 BNIP3Q12983 259 aa9.8□□□□□ -0.84
SMC4-205ENST00000465563 MPRIPQ6WCQ1 1025 aa9.8□□□□□ -0.84
SMC4-205ENST00000465563 SETDB2Q96T68 719 aa9.8□□□□□ -0.84
SMC4-205ENST00000465563 FBXO24O75426 580 aa9.79□□□□□ -0.84
SMC4-205ENST00000465563 PAGE1O75459 146 aa9.79□□□□□ -0.84
SMC4-205ENST00000465563 TRIM37O94972 964 aa9.79□□□□□ -0.84
SMC4-205ENST00000465563 LRRC14Q15048 493 aa9.79□□□□□ -0.84
SMC4-205ENST00000465563 IFI16Q16666 785 aaKnown RBP9.79□□□□□ -0.84
SMC4-205ENST00000465563 WFDC3Q8IUB2 231 aa9.79□□□□□ -0.84
SMC4-205ENST00000465563 TOP6BLQ8N6T0 577 aa9.79□□□□□ -0.84
SMC4-205ENST00000465563 PICK1Q9NRD5 415 aa9.79□□□□□ -0.84
SMC4-205ENST00000465563 VAV3Q9UKW4 847 aa9.79□□□□□ -0.84
SMC4-205ENST00000465563 WWC3Q9ULE0 1092 aa9.79□□□□□ -0.84
SMC4-205ENST00000465563 SPG7Q9UQ90 795 aa9.79□□□□□ -0.84
SMC4-205ENST00000465563 PRKCQQ04759 706 aa9.78□□□□□ -0.84
SMC4-205ENST00000465563 PPM1JQ5JR12 505 aa9.78□□□□□ -0.84
SMC4-205ENST00000465563 LLGL2Q6P1M3 1020 aa9.78□□□□□ -0.84
SMC4-205ENST00000465563 ANKRD24Q8TF21 1146 aa9.78□□□□□ -0.84
SMC4-205ENST00000465563 CSADQ9Y600 493 aa9.78□□□□□ -0.84
SMC4-205ENST00000465563 U3KQE9 123 aa9.78□□□□□ -0.84
SMC4-205ENST00000465563 OXCT1P55809 520 aa9.77□□□□□ -0.85
SMC4-205ENST00000465563 ZNF792Q3KQV3 632 aa9.77□□□□□ -0.85
SMC4-205ENST00000465563 BTBD11A6QL63 1104 aa9.76□□□□□ -0.85
SMC4-205ENST00000465563 DCDC2CA8MYV0 355 aa9.76□□□□□ -0.85
SMC4-205ENST00000465563 CEACAM5P06731 702 aa9.76□□□□□ -0.85
SMC4-205ENST00000465563 CD8BP10966 210 aa9.76□□□□□ -0.85
SMC4-205ENST00000465563 SCARA3Q6AZY7 606 aa9.76□□□□□ -0.85
SMC4-205ENST00000465563 C12orf49Q9H741 205 aa9.76□□□□□ -0.85
SMC4-205ENST00000465563 FAM8A1Q9UBU6 413 aa9.76□□□□□ -0.85
SMC4-205ENST00000465563 TMEM265A0A087WTH1 108 aa9.75□□□□□ -0.85
SMC4-205ENST00000465563 FANCGO15287 622 aa9.75□□□□□ -0.85
SMC4-205ENST00000465563 FUT4P22083 530 aa9.75□□□□□ -0.85
SMC4-205ENST00000465563 AOC3Q16853 763 aa9.75□□□□□ -0.85
SMC4-205ENST00000465563 C12orf40Q86WS4 652 aa9.75□□□□□ -0.85
SMC4-205ENST00000465563 HRASLS5Q96KN8 279 aa9.75□□□□□ -0.85
SMC4-205ENST00000465563 PCDHA4Q9UN74 947 aa9.75□□□□□ -0.85
SMC4-205ENST00000465563 CYP8B1Q9UNU6 501 aa9.75□□□□□ -0.85
SMC4-205ENST00000465563 BIN1O00499 593 aa9.74□□□□□ -0.85
SMC4-205ENST00000465563 NTF4P34130 210 aa9.74□□□□□ -0.85
SMC4-205ENST00000465563 RING1Q06587 406 aa9.74□□□□□ -0.85
SMC4-205ENST00000465563 CDC37L1Q7L3B6 337 aa9.74□□□□□ -0.85
SMC4-205ENST00000465563 PRDM10Q9NQV6 1147 aa9.74□□□□□ -0.85
SMC4-205ENST00000465563 GTF2IRD1Q9UHL9 959 aa9.74□□□□□ -0.85
SMC4-205ENST00000465563 ITIH2P19823 946 aa9.73□□□□□ -0.85
SMC4-205ENST00000465563 ZBTB37Q5TC79 503 aa9.73□□□□□ -0.85
SMC4-205ENST00000465563 RASIP1Q5U651 963 aa9.73□□□□□ -0.85
SMC4-205ENST00000465563 PCNX4Q63HM2 1172 aa9.73□□□□□ -0.85
SMC4-205ENST00000465563 OGFOD2Q6N063 350 aa9.73□□□□□ -0.85
SMC4-205ENST00000465563 HEXIM2Q96MH2 286 aaKnown RBP9.73□□□□□ -0.85
SMC4-205ENST00000465563 PLAGL2Q9UPG8 496 aa9.73□□□□□ -0.85
SMC4-205ENST00000465563 PAPLNO95428 1278 aa9.72□□□□□ -0.85
SMC4-205ENST00000465563 P4HBP07237 508 aaKnown RBP9.72□□□□□ -0.85
SMC4-205ENST00000465563 CELA3AP09093 270 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms