RNA–Protein interactions for RNA: ENST00000465315.1

CCDC115-204, Transcript of coiled-coil domain containing 115, humanhuman

TSL 2

Gene CCDC115, Length 3,562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-204ENST00000465315 NGLY1Q96IV0 654 aa13.12□□□□□ -0.31
CCDC115-204ENST00000465315 NIP7Q9Y221 180 aaKnown RBP eCLIP13.12□□□□□ -0.31
CCDC115-204ENST00000465315 OVOS2A0A0G2JMS6 1433 aa13.12□□□□□ -0.31
CCDC115-204ENST00000465315 SARM1Q6SZW1 724 aa13.11□□□□□ -0.31
CCDC115-204ENST00000465315 SMAP1Q8IYB5 467 aaPredicted RBP13.11□□□□□ -0.31
CCDC115-204ENST00000465315 KRI1Q8N9T8 703 aaKnown RBP13.11□□□□□ -0.31
CCDC115-204ENST00000465315 WASF1Q92558 559 aa13.11□□□□□ -0.31
CCDC115-204ENST00000465315 ATG3Q9NT62 314 aa13.11□□□□□ -0.31
CCDC115-204ENST00000465315 RFX7Q2KHR2 1363 aa13.11□□□□□ -0.31
CCDC115-204ENST00000465315 SH2B2O14492 632 aaPredicted RBP13.11□□□□□ -0.31
CCDC115-204ENST00000465315 XBP1P17861 261 aa13.11□□□□□ -0.31
CCDC115-204ENST00000465315 GTF2F1P35269 517 aaKnown RBP eCLIP13.11□□□□□ -0.31
CCDC115-204ENST00000465315 GNG11P61952 73 aa13.11□□□□□ -0.31
CCDC115-204ENST00000465315 KARSQ15046 597 aaKnown RBP13.11□□□□□ -0.31
CCDC115-204ENST00000465315 CARD10Q9BWT7 1032 aa13.11□□□□□ -0.31
CCDC115-204ENST00000465315 CDC25BP30305 580 aa13.11□□□□□ -0.31
CCDC115-204ENST00000465315 GUCY1A2P33402 732 aa13.11□□□□□ -0.31
CCDC115-204ENST00000465315 ATP6V1AP38606 617 aa13.11□□□□□ -0.31
CCDC115-204ENST00000465315 LPIN2Q92539 896 aa13.11□□□□□ -0.31
CCDC115-204ENST00000465315 DPF2Q92785 391 aa13.11□□□□□ -0.31
CCDC115-204ENST00000465315 SERTAD1Q9UHV2 236 aa13.11□□□□□ -0.31
CCDC115-204ENST00000465315 MROH7-TTC4A0A0A0MT08 1334 aa13.11□□□□□ -0.31
CCDC115-204ENST00000465315 ADKP55263 362 aaKnown RBP13.1□□□□□ -0.31
CCDC115-204ENST00000465315 CCZ1BP86790 482 aa13.1□□□□□ -0.31
CCDC115-204ENST00000465315 CCZ1P86791 482 aaPredicted RBP13.1□□□□□ -0.31
CCDC115-204ENST00000465315 TMEM87BQ96K49 555 aa13.1□□□□□ -0.31
CCDC115-204ENST00000465315 VPS54Q9P1Q0 977 aa13.1□□□□□ -0.31
CCDC115-204ENST00000465315 RIPOR2Q9Y4F9 1068 aa13.1□□□□□ -0.31
CCDC115-204ENST00000465315 TMEM232C9JQI7 657 aa13.1□□□□□ -0.31
CCDC115-204ENST00000465315 RASGRF1Q13972 1273 aa13.1□□□□□ -0.31
CCDC115-204ENST00000465315 TEX35Q5T0J7 233 aa13.1□□□□□ -0.31
CCDC115-204ENST00000465315 NKX2-3Q8TAU0 364 aa13.1□□□□□ -0.31
CCDC115-204ENST00000465315 NFE2L3Q9Y4A8 694 aa13.1□□□□□ -0.31
CCDC115-204ENST00000465315 ARHGAP29Q52LW3 1261 aa13.1□□□□□ -0.31
CCDC115-204ENST00000465315 AKNAD1Q5T1N1 836 aa13.1□□□□□ -0.31
CCDC115-204ENST00000465315 SHC4Q6S5L8 630 aa13.1□□□□□ -0.31
CCDC115-204ENST00000465315 LCORLQ8N3X6 602 aa13.1□□□□□ -0.31
CCDC115-204ENST00000465315 KRT23Q9C075 422 aa13.1□□□□□ -0.31
CCDC115-204ENST00000465315 TNS3Q68CZ2 1445 aa13.09□□□□□ -0.31
CCDC115-204ENST00000465315 PATL2C9JE40 543 aaKnown RBP13.09□□□□□ -0.31
CCDC115-204ENST00000465315 KCNQ4P56696 695 aa13.09□□□□□ -0.31
CCDC115-204ENST00000465315 ARMCX5Q6P1M9 558 aa13.09□□□□□ -0.31
CCDC115-204ENST00000465315 PPP1R13BQ96KQ4 1090 aa13.09□□□□□ -0.31
CCDC115-204ENST00000465315 STRBPQ96SI9 672 aaKnown RBP13.09□□□□□ -0.31
CCDC115-204ENST00000465315 AGXT2Q9BYV1 514 aa13.09□□□□□ -0.31
CCDC115-204ENST00000465315 CYP2D7A0A087X1C5 515 aa13.09□□□□□ -0.31
CCDC115-204ENST00000465315 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.09□□□□□ -0.31
CCDC115-204ENST00000465315 MED1Q15648 1581 aaPredicted RBP13.09□□□□□ -0.31
CCDC115-204ENST00000465315 KIF2AO00139 706 aaPredicted RBP13.09□□□□□ -0.31
CCDC115-204ENST00000465315 POLR3GO15318 223 aaPredicted RBP13.09□□□□□ -0.31
CCDC115-204ENST00000465315 CASP1P29466 404 aa13.09□□□□□ -0.31
CCDC115-204ENST00000465315 GYG1P46976 350 aa13.09□□□□□ -0.31
CCDC115-204ENST00000465315 ZNF174Q15697 407 aa13.09□□□□□ -0.31
CCDC115-204ENST00000465315 NOSTRINQ8IVI9 506 aa13.09□□□□□ -0.31
CCDC115-204ENST00000465315 DESI2Q9BSY9 194 aa13.09□□□□□ -0.31
CCDC115-204ENST00000465315 CCDC196A0A1B0GTZ2 297 aa13.08□□□□□ -0.32
CCDC115-204ENST00000465315 UBE3CQ15386 1083 aa13.08□□□□□ -0.32
CCDC115-204ENST00000465315 PPFIBP1Q86W92 1011 aa13.08□□□□□ -0.32
CCDC115-204ENST00000465315 V9GY48 417 aaPredicted RBP13.08□□□□□ -0.32
CCDC115-204ENST00000465315 KDM3BQ7LBC6 1761 aa13.08□□□□□ -0.32
CCDC115-204ENST00000465315 FOXP2O15409 715 aa13.08□□□□□ -0.32
CCDC115-204ENST00000465315 RBM6P78332 1123 aaKnown RBP13.08□□□□□ -0.32
CCDC115-204ENST00000465315 GRIN1Q05586 938 aa13.08□□□□□ -0.32
CCDC115-204ENST00000465315 AXDND1Q5T1B0 1012 aaPredicted RBP13.08□□□□□ -0.32
CCDC115-204ENST00000465315 ZNF397Q8NF99 534 aaPredicted RBP13.08□□□□□ -0.32
CCDC115-204ENST00000465315 BRMS1Q9HCU9 246 aa13.08□□□□□ -0.32
CCDC115-204ENST00000465315 SALL1Q9NSC2 1324 aa13.08□□□□□ -0.32
CCDC115-204ENST00000465315 TULP1O00294 542 aaPredicted RBP13.07□□□□□ -0.32
CCDC115-204ENST00000465315 CUTAO60888 179 aa13.07□□□□□ -0.32
CCDC115-204ENST00000465315 KRBA2Q6ZNG9 492 aa13.07□□□□□ -0.32
CCDC115-204ENST00000465315 ERO1AQ96HE7 468 aa13.07□□□□□ -0.32
CCDC115-204ENST00000465315 CARD6Q9BX69 1037 aa13.07□□□□□ -0.32
CCDC115-204ENST00000465315 CNNM2Q9H8M5 875 aa13.07□□□□□ -0.32
CCDC115-204ENST00000465315 LZTFL1Q9NQ48 299 aa13.07□□□□□ -0.32
CCDC115-204ENST00000465315 MAPK8IP1Q9UQF2 711 aa13.07□□□□□ -0.32
CCDC115-204ENST00000465315 PCDHB6Q9Y5E3 794 aa13.07□□□□□ -0.32
CCDC115-204ENST00000465315 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.07□□□□□ -0.32
CCDC115-204ENST00000465315 GNL3LQ9NVN8 582 aaKnown RBP13.07□□□□□ -0.32
CCDC115-204ENST00000465315 ARGLU1Q9NWB6 273 aaPredicted RBP13.07□□□□□ -0.32
CCDC115-204ENST00000465315 IMPACTQ9P2X3 320 aa13.07□□□□□ -0.32
CCDC115-204ENST00000465315 JCADQ9P266 1359 aa13.07□□□□□ -0.32
CCDC115-204ENST00000465315 UBN2Q6ZU65 1347 aa13.07□□□□□ -0.32
CCDC115-204ENST00000465315 POSTNQ15063 836 aa13.07□□□□□ -0.32
CCDC115-204ENST00000465315 CCDC152Q4G0S7 254 aa13.07□□□□□ -0.32
CCDC115-204ENST00000465315 IFIT1BQ5T764 474 aaKnown RBP13.07□□□□□ -0.32
CCDC115-204ENST00000465315 E4F1Q66K89 784 aaPredicted RBP13.07□□□□□ -0.32
CCDC115-204ENST00000465315 SMYD4Q8IYR2 804 aaPredicted RBP13.07□□□□□ -0.32
CCDC115-204ENST00000465315 LY9Q9HBG7 655 aa13.07□□□□□ -0.32
CCDC115-204ENST00000465315 OGFRQ9NZT2 677 aa13.07□□□□□ -0.32
CCDC115-204ENST00000465315 SUSD4Q5VX71 490 aa13.06□□□□□ -0.32
CCDC115-204ENST00000465315 SMIM5Q71RC9 77 aa13.06□□□□□ -0.32
CCDC115-204ENST00000465315 NBPF11Q86T75 865 aa13.06□□□□□ -0.32
CCDC115-204ENST00000465315 OXER1Q8TDS5 423 aa13.06□□□□□ -0.32
CCDC115-204ENST00000465315 RNF41Q9H4P4 317 aaPredicted RBP13.06□□□□□ -0.32
CCDC115-204ENST00000465315 DACH1Q9UI36 760 aa13.06□□□□□ -0.32
CCDC115-204ENST00000465315 MAGEB6P1A0A0J9YX57 407 aa13.06□□□□□ -0.32
CCDC115-204ENST00000465315 VWA3AA6NCI4 1184 aa13.06□□□□□ -0.32
CCDC115-204ENST00000465315 ZSCAN12O43309 604 aa13.06□□□□□ -0.32
CCDC115-204ENST00000465315 TPM1P09493 284 aa13.06□□□□□ -0.32
CCDC115-204ENST00000465315 CASQ1P31415 396 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms