RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 RCAN3Q9UKA8 241 aa31.75■■■□□ 2.67
U2AF1-206ENST00000464750 IRF6O14896 467 aa31.74■■■□□ 2.67
U2AF1-206ENST00000464750 SH3BP5LQ7L8J4 393 aa31.74■■■□□ 2.67
U2AF1-206ENST00000464750 TLR7Q9NYK1 1049 aaKnown RBP31.74■■■□□ 2.67
U2AF1-206ENST00000464750 EXOC6BQ9Y2D4 811 aa31.74■■■□□ 2.67
U2AF1-206ENST00000464750 CETPP11597 493 aa31.73■■■□□ 2.67
U2AF1-206ENST00000464750 PPATQ06203 517 aa31.73■■■□□ 2.67
U2AF1-206ENST00000464750 SNAPC2Q13487 334 aa31.73■■■□□ 2.67
U2AF1-206ENST00000464750 FAM43AQ8N2R8 423 aa31.73■■■□□ 2.67
U2AF1-206ENST00000464750 HPS5Q9UPZ3 1129 aa31.73■■■□□ 2.67
U2AF1-206ENST00000464750 COG6Q9Y2V7 657 aa31.73■■■□□ 2.67
U2AF1-206ENST00000464750 TAF1CQ15572 869 aaPredicted RBP31.72■■■□□ 2.67
U2AF1-206ENST00000464750 NOL9Q5SY16 702 aaKnown RBP31.72■■■□□ 2.67
U2AF1-206ENST00000464750 CCDC8Q9H0W5 538 aaPredicted RBP31.72■■■□□ 2.67
U2AF1-206ENST00000464750 DDX19BQ9UMR2 479 aa31.72■■■□□ 2.67
U2AF1-206ENST00000464750 DDTLA6NHG4 134 aaPredicted RBP31.71■■■□□ 2.67
U2AF1-206ENST00000464750 EAF2Q96CJ1 260 aaPredicted RBP31.71■■■□□ 2.67
U2AF1-206ENST00000464750 ZNF512BQ96KM6 892 aaPredicted RBP31.71■■■□□ 2.67
U2AF1-206ENST00000464750 DOCK1Q14185 1865 aa31.71■■■□□ 2.67
U2AF1-206ENST00000464750 FBXO46Q6PJ61 603 aaPredicted RBP31.7■■■□□ 2.67
U2AF1-206ENST00000464750 ERC1Q8IUD2 1116 aa31.7■■■□□ 2.67
U2AF1-206ENST00000464750 ERO1AQ96HE7 468 aa31.7■■■□□ 2.67
U2AF1-206ENST00000464750 MAP4K4O95819 1239 aaPredicted RBP31.69■■■□□ 2.66
U2AF1-206ENST00000464750 RGS19P49795 217 aa31.69■■■□□ 2.66
U2AF1-206ENST00000464750 ZFYVE28Q9HCC9 887 aa31.69■■■□□ 2.66
U2AF1-206ENST00000464750 TRIM17Q9Y577 477 aa31.69■■■□□ 2.66
U2AF1-206ENST00000464750 CDK5RAP2Q96SN8 1893 aa31.69■■■□□ 2.66
U2AF1-206ENST00000464750 CYP2E1P05181 493 aaPredicted RBP31.68■■■□□ 2.66
U2AF1-206ENST00000464750 ZAP70P43403 619 aa31.68■■■□□ 2.66
U2AF1-206ENST00000464750 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.68■■■□□ 2.66
U2AF1-206ENST00000464750 CD99L2Q8TCZ2 262 aa31.68■■■□□ 2.66
U2AF1-206ENST00000464750 COL2A1P02458 1487 aaPredicted RBP31.67■■■□□ 2.66
U2AF1-206ENST00000464750 PHF20L1A8MW92 1017 aa31.67■■■□□ 2.66
U2AF1-206ENST00000464750 BTBD19C9JJ37 291 aa31.67■■■□□ 2.66
U2AF1-206ENST00000464750 NPM3O75607 178 aaKnown RBP31.67■■■□□ 2.66
U2AF1-206ENST00000464750 NAA16Q6N069 864 aaPredicted RBP31.67■■■□□ 2.66
U2AF1-206ENST00000464750 NOL10Q9BSC4 688 aaKnown RBP31.67■■■□□ 2.66
U2AF1-206ENST00000464750 FOCADQ5VW36 1801 aa31.66■■■□□ 2.66
U2AF1-206ENST00000464750 SOX10P56693 466 aa31.66■■■□□ 2.66
U2AF1-206ENST00000464750 SP3Q02447 781 aa31.66■■■□□ 2.66
U2AF1-206ENST00000464750 HSP90AB4PQ58FF6 505 aa31.66■■■□□ 2.66
U2AF1-206ENST00000464750 OTOP1Q7RTM1 612 aa31.66■■■□□ 2.66
U2AF1-206ENST00000464750 TEX11Q8IYF3 940 aa31.66■■■□□ 2.66
U2AF1-206ENST00000464750 ZCCHC17Q9NP64 241 aaKnown RBP31.66■■■□□ 2.66
U2AF1-206ENST00000464750 ZBTB40Q9NUA8 1239 aa31.66■■■□□ 2.66
U2AF1-206ENST00000464750 KCNH4Q9UQ05 1017 aa31.66■■■□□ 2.66
U2AF1-206ENST00000464750 SLURP2P0DP57 97 aa31.65■■■□□ 2.66
U2AF1-206ENST00000464750 MAP3K10Q02779 954 aa31.65■■■□□ 2.66
U2AF1-206ENST00000464750 AACSQ86V21 672 aa31.65■■■□□ 2.66
U2AF1-206ENST00000464750 SCYL3Q8IZE3 742 aa31.65■■■□□ 2.66
U2AF1-206ENST00000464750 PIH1D3Q9NQM4 214 aaKnown RBP31.65■■■□□ 2.66
U2AF1-206ENST00000464750 MLLT1Q03111 559 aaPredicted RBP31.64■■■□□ 2.66
U2AF1-206ENST00000464750 RPAP2Q8IXW5 612 aaPredicted RBP31.64■■■□□ 2.66
U2AF1-206ENST00000464750 SH3RF3Q8TEJ3 882 aaPredicted RBP31.64■■■□□ 2.66
U2AF1-206ENST00000464750 OSBPL5Q9H0X9 879 aaPredicted RBP31.64■■■□□ 2.66
U2AF1-206ENST00000464750 AATFQ9NY61 560 aaKnown RBP eCLIP31.64■■■□□ 2.66
U2AF1-206ENST00000464750 PHIPQ8WWQ0 1821 aa31.63■■■□□ 2.65
U2AF1-206ENST00000464750 PTPRFP10586 1907 aa31.63■■■□□ 2.65
U2AF1-206ENST00000464750 IL1RAPL2Q9NP60 686 aa31.63■■■□□ 2.65
U2AF1-206ENST00000464750 PICK1Q9NRD5 415 aa31.63■■■□□ 2.65
U2AF1-206ENST00000464750 HMMRO75330 724 aa31.62■■■□□ 2.65
U2AF1-206ENST00000464750 BAG3O95817 575 aa31.62■■■□□ 2.65
U2AF1-206ENST00000464750 RHPN1Q8TCX5 695 aa31.62■■■□□ 2.65
U2AF1-206ENST00000464750 ATAD5Q96QE3 1844 aa31.62■■■□□ 2.65
U2AF1-206ENST00000464750 IGSF3O75054 1194 aa31.61■■■□□ 2.65
U2AF1-206ENST00000464750 ADGRA1Q86SQ6 560 aa31.61■■■□□ 2.65
U2AF1-206ENST00000464750 CHMP4BQ9H444 224 aaKnown RBP31.61■■■□□ 2.65
U2AF1-206ENST00000464750 SIPA1L1O43166 1804 aa31.61■■■□□ 2.65
U2AF1-206ENST00000464750 ANKRD23Q86SG2 305 aa31.6■■■□□ 2.65
U2AF1-206ENST00000464750 SIRT2Q8IXJ6 389 aa31.6■■■□□ 2.65
U2AF1-206ENST00000464750 EFCC1Q9HA90 598 aa31.6■■■□□ 2.65
U2AF1-206ENST00000464750 ZSWIM8A7E2V4 1837 aa31.6■■■□□ 2.65
U2AF1-206ENST00000464750 FAM196BA6NMK8 535 aa31.59■■■□□ 2.65
U2AF1-206ENST00000464750 APBB1O00213 710 aa31.59■■■□□ 2.65
U2AF1-206ENST00000464750 TBC1D12O60347 775 aa31.59■■■□□ 2.65
U2AF1-206ENST00000464750 TLR2O60603 784 aa31.59■■■□□ 2.65
U2AF1-206ENST00000464750 PLCG2P16885 1265 aa31.59■■■□□ 2.65
U2AF1-206ENST00000464750 PTPRAP18433 802 aa31.59■■■□□ 2.65
U2AF1-206ENST00000464750 CAP1Q01518 475 aa31.59■■■□□ 2.65
U2AF1-206ENST00000464750 C20orf194Q5TEA3 1177 aa31.59■■■□□ 2.65
U2AF1-206ENST00000464750 NDUFB9Q9Y6M9 179 aa31.59■■■□□ 2.65
U2AF1-206ENST00000464750 HTTP42858 3142 aa31.58■■■□□ 2.65
U2AF1-206ENST00000464750 CXCL11O14625 94 aa31.58■■■□□ 2.65
U2AF1-206ENST00000464750 CTNND1O60716 968 aaKnown RBP31.58■■■□□ 2.65
U2AF1-206ENST00000464750 PPP4CP60510 307 aa31.58■■■□□ 2.65
U2AF1-206ENST00000464750 MOGSQ13724 837 aa31.58■■■□□ 2.65
U2AF1-206ENST00000464750 KIF1BPQ96EK5 621 aa31.58■■■□□ 2.65
U2AF1-206ENST00000464750 XPO5Q9HAV4 1204 aaKnown RBP eCLIP31.58■■■□□ 2.65
U2AF1-206ENST00000464750 ZHX2Q9Y6X8 837 aa31.58■■■□□ 2.65
U2AF1-206ENST00000464750 IDH1O75874 414 aaKnown RBP31.57■■■□□ 2.64
U2AF1-206ENST00000464750 PDE3AQ14432 1141 aa31.57■■■□□ 2.64
U2AF1-206ENST00000464750 PDHXO00330 501 aa31.56■■■□□ 2.64
U2AF1-206ENST00000464750 CLASRPQ8N2M8 674 aaKnown RBP31.56■■■□□ 2.64
U2AF1-206ENST00000464750 PTPN22Q9Y2R2 807 aa31.56■■■□□ 2.64
U2AF1-206ENST00000464750 CYP7A1P22680 504 aa31.55■■■□□ 2.64
U2AF1-206ENST00000464750 MAPKAPK5Q8IW41 473 aa31.55■■■□□ 2.64
U2AF1-206ENST00000464750 FRMD4AQ9P2Q2 1039 aaPredicted RBP31.55■■■□□ 2.64
U2AF1-206ENST00000464750 FLT1P17948 1338 aa31.54■■■□□ 2.64
U2AF1-206ENST00000464750 TGFBRAP1Q8WUH2 860 aa31.54■■■□□ 2.64
U2AF1-206ENST00000464750 ANTXR1Q9H6X2 564 aa31.54■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms