RNA–Protein interactions for RNA: ENST00000464290.5

CRAT-208, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 3

Gene CRAT, Length 867 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-208ENST00000464290 SMIM22K7EJ46 135 aa18.16■□□□□ 0.5
CRAT-208ENST00000464290 CYP2D6P10635 497 aa18.16■□□□□ 0.5
CRAT-208ENST00000464290 ANAPC15P60006 121 aa18.16■□□□□ 0.5
CRAT-208ENST00000464290 PICALMQ13492 652 aa18.16■□□□□ 0.5
CRAT-208ENST00000464290 IMMTQ16891 758 aaKnown RBP18.16■□□□□ 0.5
CRAT-208ENST00000464290 TSGA10IPQ3SY00 556 aa18.16■□□□□ 0.5
CRAT-208ENST00000464290 SPDYE2Q495Y8 402 aa18.16■□□□□ 0.5
CRAT-208ENST00000464290 RNF20Q5VTR2 975 aa18.16■□□□□ 0.5
CRAT-208ENST00000464290 IDI2Q9BXS1 227 aa18.16■□□□□ 0.5
CRAT-208ENST00000464290 NBPF3Q9H094 633 aa18.16■□□□□ 0.5
CRAT-208ENST00000464290 ZNF70Q9UC06 446 aaPredicted RBP18.16■□□□□ 0.5
CRAT-208ENST00000464290 FAM198AQ9UFP1 575 aa18.16■□□□□ 0.5
CRAT-208ENST00000464290 ECM29Q5VYK3 1845 aa18.16■□□□□ 0.5
CRAT-208ENST00000464290 FOCADQ5VW36 1801 aa18.15■□□□□ 0.5
CRAT-208ENST00000464290 ZNF213O14771 459 aa18.15■□□□□ 0.5
CRAT-208ENST00000464290 EVX2Q03828 476 aa18.15■□□□□ 0.5
CRAT-208ENST00000464290 KIF4BQ2VIQ3 1234 aa18.15■□□□□ 0.5
CRAT-208ENST00000464290 SBK1Q52WX2 424 aa18.15■□□□□ 0.5
CRAT-208ENST00000464290 ZFPM1Q8IX07 1006 aa18.15■□□□□ 0.5
CRAT-208ENST00000464290 TRPM4Q8TD43 1214 aa18.15■□□□□ 0.5
CRAT-208ENST00000464290 DDRGK1Q96HY6 314 aa18.15■□□□□ 0.5
CRAT-208ENST00000464290 L3MBTL3Q96JM7 780 aaPredicted RBP18.15■□□□□ 0.5
CRAT-208ENST00000464290 MCM9Q9NXL9 1143 aa18.15■□□□□ 0.5
CRAT-208ENST00000464290 SAP30BPQ9UHR5 308 aaKnown RBP18.15■□□□□ 0.5
CRAT-208ENST00000464290 MINDY4BA8MYZ0 360 aa18.14■□□□□ 0.49
CRAT-208ENST00000464290 NPM3O75607 178 aaKnown RBP18.14■□□□□ 0.49
CRAT-208ENST00000464290 ZKSCAN1P17029 563 aaPredicted RBP18.14■□□□□ 0.49
CRAT-208ENST00000464290 PPARAQ07869 468 aa18.14■□□□□ 0.49
CRAT-208ENST00000464290 ADCK5Q3MIX3 580 aa18.14■□□□□ 0.49
CRAT-208ENST00000464290 STOX1Q6ZVD7 989 aa18.14■□□□□ 0.49
CRAT-208ENST00000464290 OSBPL5Q9H0X9 879 aaPredicted RBP18.14■□□□□ 0.49
CRAT-208ENST00000464290 NAV1Q8NEY1 1877 aa18.14■□□□□ 0.49
CRAT-208ENST00000464290 LMOD1P29536 600 aaPredicted RBP18.13■□□□□ 0.49
CRAT-208ENST00000464290 HIRAP54198 1017 aaPredicted RBP18.13■□□□□ 0.49
CRAT-208ENST00000464290 CTDSPL2Q05D32 466 aa18.13■□□□□ 0.49
CRAT-208ENST00000464290 C12orf60Q5U649 245 aa18.13■□□□□ 0.49
CRAT-208ENST00000464290 TBC1D10CQ8IV04 446 aa18.13■□□□□ 0.49
CRAT-208ENST00000464290 ARPP21Q9UBL0 812 aaPredicted RBP18.13■□□□□ 0.49
CRAT-208ENST00000464290 ANAPC4Q9UJX5 808 aa18.13■□□□□ 0.49
CRAT-208ENST00000464290 RBM19Q9Y4C8 960 aaKnown RBP18.13■□□□□ 0.49
CRAT-208ENST00000464290 TACC3Q9Y6A5 838 aa18.13■□□□□ 0.49
CRAT-208ENST00000464290 ASTN2O75129 1339 aaPredicted RBP18.13■□□□□ 0.49
CRAT-208ENST00000464290 E7EWF7 191 aa18.12■□□□□ 0.49
CRAT-208ENST00000464290 MYO1BO43795 1136 aa18.12■□□□□ 0.49
CRAT-208ENST00000464290 ENTPD3O75355 529 aa18.12■□□□□ 0.49
CRAT-208ENST00000464290 PLCD1P51178 756 aa18.12■□□□□ 0.49
CRAT-208ENST00000464290 TCP10Q12799 353 aa18.12■□□□□ 0.49
CRAT-208ENST00000464290 COL9A3Q14050 684 aaPredicted RBP18.12■□□□□ 0.49
CRAT-208ENST00000464290 SLC4A8Q2Y0W8 1093 aa18.12■□□□□ 0.49
CRAT-208ENST00000464290 FKBP1CQ5VVH2 108 aa18.12■□□□□ 0.49
CRAT-208ENST00000464290 VEZTQ9HBM0 779 aa18.12■□□□□ 0.49
CRAT-208ENST00000464290 INCENPQ9NQS7 918 aa18.12■□□□□ 0.49
CRAT-208ENST00000464290 ADARB2Q9NS39 739 aaKnown RBP18.12■□□□□ 0.49
CRAT-208ENST00000464290 TMOD2Q9NZR1 351 aa18.12■□□□□ 0.49
CRAT-208ENST00000464290 DDX60LQ5H9U9 1706 aaKnown RBP18.12■□□□□ 0.49
CRAT-208ENST00000464290 LAMA4Q16363 1823 aa18.12■□□□□ 0.49
CRAT-208ENST00000464290 MYH1P12882 1939 aa18.11■□□□□ 0.49
CRAT-208ENST00000464290 POTECB2RU33 542 aa18.11■□□□□ 0.49
CRAT-208ENST00000464290 TCP10L2B9ZVM9 353 aa18.11■□□□□ 0.49
CRAT-208ENST00000464290 POLR3DP05423 398 aaPredicted RBP18.11■□□□□ 0.49
CRAT-208ENST00000464290 SH3BP5LQ7L8J4 393 aa18.11■□□□□ 0.49
CRAT-208ENST00000464290 JAKMIP1Q96N16 626 aaKnown RBP18.11■□□□□ 0.49
CRAT-208ENST00000464290 CNTNAP1P78357 1384 aa18.1■□□□□ 0.49
CRAT-208ENST00000464290 KRT32Q14532 448 aa18.1■□□□□ 0.49
CRAT-208ENST00000464290 AKNAD1Q5T1N1 836 aa18.1■□□□□ 0.49
CRAT-208ENST00000464290 STK11IPQ8N1F8 1099 aa18.1■□□□□ 0.49
CRAT-208ENST00000464290 NKX2-3Q8TAU0 364 aa18.1■□□□□ 0.49
CRAT-208ENST00000464290 TM6SF1Q9BZW5 370 aa18.1■□□□□ 0.49
CRAT-208ENST00000464290 HACL1Q9UJ83 578 aa18.1■□□□□ 0.49
CRAT-208ENST00000464290 DDTLA6NHG4 134 aaPredicted RBP18.09■□□□□ 0.49
CRAT-208ENST00000464290 FGRP09769 529 aa18.09■□□□□ 0.49
CRAT-208ENST00000464290 CPA1P15085 419 aa18.09■□□□□ 0.49
CRAT-208ENST00000464290 RABEP1Q15276 862 aa18.09■□□□□ 0.49
CRAT-208ENST00000464290 FAM83AQ86UY5 434 aa18.09■□□□□ 0.49
CRAT-208ENST00000464290 STAG1Q8WVM7 1258 aa18.09■□□□□ 0.49
CRAT-208ENST00000464290 FAM151AQ8WW52 585 aa18.09■□□□□ 0.49
CRAT-208ENST00000464290 DYNLL2Q96FJ2 89 aa18.09■□□□□ 0.49
CRAT-208ENST00000464290 NEK1Q96PY6 1258 aa18.09■□□□□ 0.49
CRAT-208ENST00000464290 ZSWIM6Q9HCJ5 1215 aa18.09■□□□□ 0.49
CRAT-208ENST00000464290 SCAF8Q9UPN6 1271 aaKnown RBP18.09■□□□□ 0.49
CRAT-208ENST00000464290 NEDD4P46934 1319 aa18.08■□□□□ 0.49
CRAT-208ENST00000464290 CASTP20810 708 aaKnown RBP18.08■□□□□ 0.48
CRAT-208ENST00000464290 EPHX2P34913 555 aa18.08■□□□□ 0.48
CRAT-208ENST00000464290 MFSD6Q6ZSS7 791 aa18.08■□□□□ 0.48
CRAT-208ENST00000464290 TTC6Q86TZ1 520 aa18.08■□□□□ 0.48
CRAT-208ENST00000464290 AMOTL1Q8IY63 956 aa18.08■□□□□ 0.48
CRAT-208ENST00000464290 UPF3BQ9BZI7 483 aaKnown RBP18.08■□□□□ 0.48
CRAT-208ENST00000464290 PGAP2Q9UHJ9 254 aa18.08■□□□□ 0.48
CRAT-208ENST00000464290 LAMB1P07942 1786 aa18.08■□□□□ 0.48
CRAT-208ENST00000464290 ROBO3Q96MS0 1386 aa18.07■□□□□ 0.48
CRAT-208ENST00000464290 WDR90Q96KV7 1748 aa18.07■□□□□ 0.48
CRAT-208ENST00000464290 PSMA5P28066 241 aa18.07■□□□□ 0.48
CRAT-208ENST00000464290 ANGEL2Q5VTE6 544 aaKnown RBP18.07■□□□□ 0.48
CRAT-208ENST00000464290 DHX36Q9H2U1 1008 aaKnown RBP18.07■□□□□ 0.48
CRAT-208ENST00000464290 TAF1DQ9H5J8 278 aaPredicted RBP18.07■□□□□ 0.48
CRAT-208ENST00000464290 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.07■□□□□ 0.48
CRAT-208ENST00000464290 COL2A1P02458 1487 aaPredicted RBP18.07■□□□□ 0.48
CRAT-208ENST00000464290 ATRNL1Q5VV63 1379 aa18.06■□□□□ 0.48
CRAT-208ENST00000464290 IQCA1LA6NCM1 817 aa18.06■□□□□ 0.48
CRAT-208ENST00000464290 SLC3A2P08195 630 aaKnown RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms