RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 BRAPQ7Z569 592 aa8.31□□□□□ -1.08
CLSTN1-204ENST00000464286 FERMT3Q86UX7 667 aa8.31□□□□□ -1.08
CLSTN1-204ENST00000464286 AACSQ86V21 672 aa8.31□□□□□ -1.08
CLSTN1-204ENST00000464286 MSL3Q8N5Y2 521 aaKnown RBP8.31□□□□□ -1.08
CLSTN1-204ENST00000464286 GPR161Q8N6U8 529 aaKnown RBP8.31□□□□□ -1.08
CLSTN1-204ENST00000464286 NECAB1Q8N987 351 aa8.31□□□□□ -1.08
CLSTN1-204ENST00000464286 JMYQ8N9B5 988 aa8.31□□□□□ -1.08
CLSTN1-204ENST00000464286 FAM174AQ8TBP5 190 aa8.31□□□□□ -1.08
CLSTN1-204ENST00000464286 CCDC34Q96HJ3 373 aa8.31□□□□□ -1.08
CLSTN1-204ENST00000464286 TRIM47Q96LD4 638 aa8.31□□□□□ -1.08
CLSTN1-204ENST00000464286 CDK15Q96Q40 435 aa8.31□□□□□ -1.08
CLSTN1-204ENST00000464286 SDF4Q9BRK5 362 aa8.31□□□□□ -1.08
CLSTN1-204ENST00000464286 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.31□□□□□ -1.08
CLSTN1-204ENST00000464286 FAM107BQ9H098 131 aa8.31□□□□□ -1.08
CLSTN1-204ENST00000464286 GBP3Q9H0R5 595 aa8.31□□□□□ -1.08
CLSTN1-204ENST00000464286 ESF1Q9H501 851 aaKnown RBP8.31□□□□□ -1.08
CLSTN1-204ENST00000464286 TMEM51Q9NW97 253 aa8.31□□□□□ -1.08
CLSTN1-204ENST00000464286 NRBP1Q9UHY1 535 aa8.31□□□□□ -1.08
CLSTN1-204ENST00000464286 CHMP3Q9Y3E7 222 aa8.31□□□□□ -1.08
CLSTN1-204ENST00000464286 MED1Q15648 1581 aaPredicted RBP8.31□□□□□ -1.08
CLSTN1-204ENST00000464286 CAPN5O15484 640 aaPredicted RBP8.3□□□□□ -1.08
CLSTN1-204ENST00000464286 PFKFB2O60825 505 aa8.3□□□□□ -1.08
CLSTN1-204ENST00000464286 SMC2O95347 1197 aa8.3□□□□□ -1.08
CLSTN1-204ENST00000464286 RAPGEF3O95398 923 aa8.3□□□□□ -1.08
CLSTN1-204ENST00000464286 MAP4K4O95819 1239 aaPredicted RBP8.3□□□□□ -1.08
CLSTN1-204ENST00000464286 ME1P48163 572 aa8.3□□□□□ -1.08
CLSTN1-204ENST00000464286 PTH1RQ03431 593 aa8.3□□□□□ -1.08
CLSTN1-204ENST00000464286 PDE4CQ08493 712 aa8.3□□□□□ -1.08
CLSTN1-204ENST00000464286 NMIQ13287 307 aaPredicted RBP8.3□□□□□ -1.08
CLSTN1-204ENST00000464286 BRD3Q15059 726 aa8.3□□□□□ -1.08
CLSTN1-204ENST00000464286 CCDC144BQ3MJ40 725 aa8.3□□□□□ -1.08
CLSTN1-204ENST00000464286 ARHGAP29Q52LW3 1261 aa8.3□□□□□ -1.08
CLSTN1-204ENST00000464286 CCDC93Q567U6 631 aa8.3□□□□□ -1.08
CLSTN1-204ENST00000464286 PPP2R2DQ66LE6 453 aa8.3□□□□□ -1.08
CLSTN1-204ENST00000464286 ADALQ6DHV7 355 aa8.3□□□□□ -1.08
CLSTN1-204ENST00000464286 CCDC144CPQ8IYA2 1237 aa8.3□□□□□ -1.08
CLSTN1-204ENST00000464286 ARMC2Q8NEN0 867 aa8.3□□□□□ -1.08
CLSTN1-204ENST00000464286 SMARCC2Q8TAQ2 1214 aa8.3□□□□□ -1.08
CLSTN1-204ENST00000464286 GOLGA5Q8TBA6 731 aa8.3□□□□□ -1.08
CLSTN1-204ENST00000464286 ANKRD24Q8TF21 1146 aa8.3□□□□□ -1.08
CLSTN1-204ENST00000464286 JARID2Q92833 1246 aaPredicted RBP8.3□□□□□ -1.08
CLSTN1-204ENST00000464286 ERCC4Q92889 916 aaPredicted RBP8.3□□□□□ -1.08
CLSTN1-204ENST00000464286 BRF1Q92994 677 aa8.3□□□□□ -1.08
CLSTN1-204ENST00000464286 EXOC4Q96A65 974 aa8.3□□□□□ -1.08
CLSTN1-204ENST00000464286 PPP1R13BQ96KQ4 1090 aa8.3□□□□□ -1.08
CLSTN1-204ENST00000464286 SENP2Q9HC62 589 aa8.3□□□□□ -1.08
CLSTN1-204ENST00000464286 ARFGAP3Q9NP61 516 aa8.3□□□□□ -1.08
CLSTN1-204ENST00000464286 TFIP11Q9UBB9 837 aaKnown RBP8.3□□□□□ -1.08
CLSTN1-204ENST00000464286 ANKARQ7Z5J8 1434 aa8.29□□□□□ -1.08
CLSTN1-204ENST00000464286 ARHGAP6O43182 974 aa8.29□□□□□ -1.08
CLSTN1-204ENST00000464286 PNMA6AP0CW24 399 aaPredicted RBP8.29□□□□□ -1.08
CLSTN1-204ENST00000464286 GTF2E1P29083 439 aaPredicted RBP8.29□□□□□ -1.08
CLSTN1-204ENST00000464286 NLRP12P59046 1061 aa8.29□□□□□ -1.08
CLSTN1-204ENST00000464286 NEXNQ0ZGT2 675 aa8.29□□□□□ -1.08
CLSTN1-204ENST00000464286 NNTQ13423 1086 aa8.29□□□□□ -1.08
CLSTN1-204ENST00000464286 ADCK5Q3MIX3 580 aa8.29□□□□□ -1.08
CLSTN1-204ENST00000464286 LCE2AQ5TA79 106 aaPredicted RBP8.29□□□□□ -1.08
CLSTN1-204ENST00000464286 OLFM4Q6UX06 510 aa8.29□□□□□ -1.08
CLSTN1-204ENST00000464286 KSR2Q6VAB6 950 aa8.29□□□□□ -1.08
CLSTN1-204ENST00000464286 LEKR1Q6ZMV7 388 aa8.29□□□□□ -1.08
CLSTN1-204ENST00000464286 TRIM46Q7Z4K8 759 aa8.29□□□□□ -1.08
CLSTN1-204ENST00000464286 SH3RF1Q7Z6J0 888 aa8.29□□□□□ -1.08
CLSTN1-204ENST00000464286 TXNDC2Q86VQ3 553 aa8.29□□□□□ -1.08
CLSTN1-204ENST00000464286 BPHLQ86WA6 291 aaPredicted RBP8.29□□□□□ -1.08
CLSTN1-204ENST00000464286 DHX40Q8IX18 779 aaKnown RBP8.29□□□□□ -1.08
CLSTN1-204ENST00000464286 FSIP1Q8NA03 581 aa8.29□□□□□ -1.08
CLSTN1-204ENST00000464286 LINS1Q8NG48 757 aa8.29□□□□□ -1.08
CLSTN1-204ENST00000464286 RABGGTAQ92696 567 aa8.29□□□□□ -1.08
CLSTN1-204ENST00000464286 ZNF274Q96GC6 653 aaPredicted RBP8.29□□□□□ -1.08
CLSTN1-204ENST00000464286 PGBD1Q96JS3 809 aa8.29□□□□□ -1.08
CLSTN1-204ENST00000464286 RASSF4Q9H2L5 321 aa8.29□□□□□ -1.08
CLSTN1-204ENST00000464286 MIS18AQ9NYP9 233 aa8.29□□□□□ -1.08
CLSTN1-204ENST00000464286 RTEL1Q9NZ71 1219 aa8.29□□□□□ -1.08
CLSTN1-204ENST00000464286 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.29□□□□□ -1.08
CLSTN1-204ENST00000464286 MRC1P22897 1456 aa8.29□□□□□ -1.08
CLSTN1-204ENST00000464286 UTYO14607 1347 aa8.29□□□□□ -1.08
CLSTN1-204ENST00000464286 METP08581 1390 aa8.28□□□□□ -1.08
CLSTN1-204ENST00000464286 CEMIPQ8WUJ3 1361 aa8.28□□□□□ -1.08
CLSTN1-204ENST00000464286 SLC3A2P08195 630 aaKnown RBP8.28□□□□□ -1.08
CLSTN1-204ENST00000464286 ATP5JP18859 108 aa8.28□□□□□ -1.08
CLSTN1-204ENST00000464286 MCM3P25205 808 aa8.28□□□□□ -1.08
CLSTN1-204ENST00000464286 TEFQ10587 303 aa8.28□□□□□ -1.08
CLSTN1-204ENST00000464286 ST3GAL1Q11201 340 aa8.28□□□□□ -1.08
CLSTN1-204ENST00000464286 TOB2Q14106 344 aaPredicted RBP8.28□□□□□ -1.08
CLSTN1-204ENST00000464286 AGERQ15109 404 aa8.28□□□□□ -1.08
CLSTN1-204ENST00000464286 STK38Q15208 465 aa8.28□□□□□ -1.08
CLSTN1-204ENST00000464286 AMOTQ4VCS5 1084 aa8.28□□□□□ -1.08
CLSTN1-204ENST00000464286 CT47A1Q5JQC4 288 aaPredicted RBP8.28□□□□□ -1.08
CLSTN1-204ENST00000464286 TREML4Q6UXN2 200 aa8.28□□□□□ -1.08
CLSTN1-204ENST00000464286 DHX32Q7L7V1 743 aaKnown RBP8.28□□□□□ -1.08
CLSTN1-204ENST00000464286 TMC6Q7Z403 805 aa8.28□□□□□ -1.08
CLSTN1-204ENST00000464286 FBXL16Q8N461 479 aa8.28□□□□□ -1.08
CLSTN1-204ENST00000464286 AOPEPQ8N6M6 819 aa8.28□□□□□ -1.08
CLSTN1-204ENST00000464286 GOLGA1Q92805 767 aa8.28□□□□□ -1.08
CLSTN1-204ENST00000464286 IL25Q9H293 177 aa8.28□□□□□ -1.08
CLSTN1-204ENST00000464286 ORC3Q9UBD5 711 aaPredicted RBP8.28□□□□□ -1.08
CLSTN1-204ENST00000464286 MKRN1Q9UHC7 482 aaKnown RBP8.28□□□□□ -1.08
CLSTN1-204ENST00000464286 FHOD1Q9Y613 1164 aa8.28□□□□□ -1.08
CLSTN1-204ENST00000464286 NPHP4O75161 1426 aaPredicted RBP8.28□□□□□ -1.08
CLSTN1-204ENST00000464286 LMO7Q8WWI1 1683 aa8.27□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms