RNA–Protein interactions for RNA: ENST00000463688.6

COMMD3-205, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,407 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-205ENST00000463688 ZNF112Q9UJU3 913 aa16.38■□□□□ 0.21
COMMD3-205ENST00000463688 AOX1Q06278 1338 aa16.38■□□□□ 0.21
COMMD3-205ENST00000463688 CXCL11O14625 94 aa16.37■□□□□ 0.21
COMMD3-205ENST00000463688 PPP4CP60510 307 aa16.37■□□□□ 0.21
COMMD3-205ENST00000463688 AAMPQ13685 434 aa16.37■□□□□ 0.21
COMMD3-205ENST00000463688 TRIM34Q9BYJ4 488 aa16.37■□□□□ 0.21
COMMD3-205ENST00000463688 GINM1Q9NU53 330 aa16.37■□□□□ 0.21
COMMD3-205ENST00000463688 HERC5Q9UII4 1024 aaKnown RBP16.37■□□□□ 0.21
COMMD3-205ENST00000463688 SSC5DA1L4H1 1573 aa16.37■□□□□ 0.21
COMMD3-205ENST00000463688 CCL15-CCL14A0A0B4J2E2 113 aa16.36■□□□□ 0.21
COMMD3-205ENST00000463688 CTNND1O60716 968 aaKnown RBP16.36■□□□□ 0.21
COMMD3-205ENST00000463688 TBC1D8O95759 1140 aa16.36■□□□□ 0.21
COMMD3-205ENST00000463688 CCL15Q16663 113 aa16.36■□□□□ 0.21
COMMD3-205ENST00000463688 FASTKD5Q7L8L6 764 aaKnown RBP16.36■□□□□ 0.21
COMMD3-205ENST00000463688 TEX11Q8IYF3 940 aa16.36■□□□□ 0.21
COMMD3-205ENST00000463688 OTUD5Q96G74 571 aa16.36■□□□□ 0.21
COMMD3-205ENST00000463688 GPATCH3Q96I76 525 aa16.36■□□□□ 0.21
COMMD3-205ENST00000463688 MCOLN1Q9GZU1 580 aa16.36■□□□□ 0.21
COMMD3-205ENST00000463688 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.36■□□□□ 0.21
COMMD3-205ENST00000463688 FAM198AQ9UFP1 575 aa16.36■□□□□ 0.21
COMMD3-205ENST00000463688 DBNLQ9UJU6 430 aaKnown RBP16.36■□□□□ 0.21
COMMD3-205ENST00000463688 TAOK2Q9UL54 1235 aa16.36■□□□□ 0.21
COMMD3-205ENST00000463688 EXOC6BQ9Y2D4 811 aa16.36■□□□□ 0.21
COMMD3-205ENST00000463688 MAP3K10Q02779 954 aa16.36■□□□□ 0.21
COMMD3-205ENST00000463688 NFIAQ12857 509 aa16.36■□□□□ 0.21
COMMD3-205ENST00000463688 MIGA2Q7L4E1 593 aa16.36■□□□□ 0.21
COMMD3-205ENST00000463688 ZNF296Q8WUU4 475 aaPredicted RBP16.36■□□□□ 0.21
COMMD3-205ENST00000463688 EAF2Q96CJ1 260 aaPredicted RBP16.36■□□□□ 0.21
COMMD3-205ENST00000463688 CCDC8Q9H0W5 538 aaPredicted RBP16.36■□□□□ 0.21
COMMD3-205ENST00000463688 PI4KBQ9UBF8 816 aa16.36■□□□□ 0.21
COMMD3-205ENST00000463688 ZBTB47Q9UFB7 747 aaPredicted RBP16.36■□□□□ 0.21
COMMD3-205ENST00000463688 CAPN15O75808 1086 aa16.35■□□□□ 0.21
COMMD3-205ENST00000463688 HLA-DOAP06340 250 aa16.35■□□□□ 0.21
COMMD3-205ENST00000463688 PICALMQ13492 652 aa16.35■□□□□ 0.21
COMMD3-205ENST00000463688 KIF22Q14807 665 aa16.35■□□□□ 0.21
COMMD3-205ENST00000463688 TBC1D9Q6ZT07 1266 aa16.35■□□□□ 0.21
COMMD3-205ENST00000463688 ATRNL1Q5VV63 1379 aa16.34■□□□□ 0.21
COMMD3-205ENST00000463688 COL2A1P02458 1487 aaPredicted RBP16.34■□□□□ 0.21
COMMD3-205ENST00000463688 AKAP11Q9UKA4 1901 aa16.34■□□□□ 0.21
COMMD3-205ENST00000463688 IDH1O75874 414 aaKnown RBP16.34■□□□□ 0.21
COMMD3-205ENST00000463688 GNRH1P01148 92 aa16.34■□□□□ 0.21
COMMD3-205ENST00000463688 CYP2E1P05181 493 aaPredicted RBP16.34■□□□□ 0.21
COMMD3-205ENST00000463688 LRRFIP1Q32MZ4 808 aaKnown RBP16.34■□□□□ 0.21
COMMD3-205ENST00000463688 FOXP4Q8IVH2 680 aaPredicted RBP16.34■□□□□ 0.21
COMMD3-205ENST00000463688 SCYL3Q8IZE3 742 aa16.34■□□□□ 0.21
COMMD3-205ENST00000463688 LRRCC1Q9C099 1032 aa16.34■□□□□ 0.21
COMMD3-205ENST00000463688 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.34■□□□□ 0.21
COMMD3-205ENST00000463688 OSBPL5Q9H0X9 879 aaPredicted RBP16.34■□□□□ 0.21
COMMD3-205ENST00000463688 FZD1Q9UP38 647 aa16.34■□□□□ 0.21
COMMD3-205ENST00000463688 SNCAIPQ9Y6H5 919 aa16.34■□□□□ 0.21
COMMD3-205ENST00000463688 CCDC85CA6NKD9 419 aa16.33■□□□□ 0.2
COMMD3-205ENST00000463688 ZAP70P43403 619 aa16.33■□□□□ 0.2
COMMD3-205ENST00000463688 RHBDL3P58872 404 aa16.33■□□□□ 0.2
COMMD3-205ENST00000463688 SP3Q02447 781 aa16.33■□□□□ 0.2
COMMD3-205ENST00000463688 TAF1CQ15572 869 aaPredicted RBP16.33■□□□□ 0.2
COMMD3-205ENST00000463688 ZSCAN25Q6NSZ9 544 aa16.33■□□□□ 0.2
COMMD3-205ENST00000463688 ZKSCAN4Q969J2 545 aaPredicted RBP16.33■□□□□ 0.2
COMMD3-205ENST00000463688 MS4A4AQ96JQ5 239 aa16.33■□□□□ 0.2
COMMD3-205ENST00000463688 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.33■□□□□ 0.2
COMMD3-205ENST00000463688 SNRKQ9NRH2 765 aa16.33■□□□□ 0.2
COMMD3-205ENST00000463688 PABPC4Q13310 644 aaKnown RBP eCLIP16.32■□□□□ 0.22e-13■□□□□ 8.7
COMMD3-205ENST00000463688 FBXO46Q6PJ61 603 aaPredicted RBP16.32■□□□□ 0.2
COMMD3-205ENST00000463688 ANKRD23Q86SG2 305 aa16.32■□□□□ 0.2
COMMD3-205ENST00000463688 AS3MTQ9HBK9 375 aa16.32■□□□□ 0.2
COMMD3-205ENST00000463688 KCNH4Q9UQ05 1017 aa16.32■□□□□ 0.2
COMMD3-205ENST00000463688 IGF2BP3O00425 579 aaKnown RBP eCLIP16.31■□□□□ 0.2
COMMD3-205ENST00000463688 IRF6O14896 467 aa16.31■□□□□ 0.2
COMMD3-205ENST00000463688 CYP7A1P22680 504 aa16.31■□□□□ 0.2
COMMD3-205ENST00000463688 PRMT2P55345 433 aa16.31■□□□□ 0.2
COMMD3-205ENST00000463688 PI16Q6UXB8 463 aa16.31■□□□□ 0.2
COMMD3-205ENST00000463688 BRI3BPQ8WY22 251 aa16.31■□□□□ 0.2
COMMD3-205ENST00000463688 DDRGK1Q96HY6 314 aa16.31■□□□□ 0.2
COMMD3-205ENST00000463688 PARK7Q99497 189 aaKnown RBP16.31■□□□□ 0.2
COMMD3-205ENST00000463688 SLC45A1Q9Y2W3 748 aa16.31■□□□□ 0.2
COMMD3-205ENST00000463688 MYH13Q9UKX3 1938 aa16.31■□□□□ 0.2
COMMD3-205ENST00000463688 INPP5BP32019 993 aa16.3■□□□□ 0.2
COMMD3-205ENST00000463688 GJA5P36382 358 aa16.3■□□□□ 0.2
COMMD3-205ENST00000463688 CRHR2Q13324 411 aa16.3■□□□□ 0.2
COMMD3-205ENST00000463688 TTC6Q86TZ1 520 aa16.3■□□□□ 0.2
COMMD3-205ENST00000463688 CDAN1Q8IWY9 1227 aa16.3■□□□□ 0.2
COMMD3-205ENST00000463688 CRACR2BQ8N4Y2 399 aaPredicted RBP16.3■□□□□ 0.2
COMMD3-205ENST00000463688 IL1RAPL2Q9NP60 686 aa16.3■□□□□ 0.2
COMMD3-205ENST00000463688 AATFQ9NY61 560 aaKnown RBP eCLIP16.3■□□□□ 0.2
COMMD3-205ENST00000463688 PNMA3Q9UL41 463 aa16.3■□□□□ 0.2
COMMD3-205ENST00000463688 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.3■□□□□ 0.2
COMMD3-205ENST00000463688 RFX7Q2KHR2 1363 aa16.29■□□□□ 0.2
COMMD3-205ENST00000463688 TLR2O60603 784 aa16.29■□□□□ 0.2
COMMD3-205ENST00000463688 HOXD10P28358 340 aa16.29■□□□□ 0.2
COMMD3-205ENST00000463688 USP5P45974 858 aa16.29■□□□□ 0.2
COMMD3-205ENST00000463688 AMOTL1Q8IY63 956 aa16.29■□□□□ 0.2
COMMD3-205ENST00000463688 EFCC1Q9HA90 598 aa16.29■□□□□ 0.2
COMMD3-205ENST00000463688 ZHX2Q9Y6X8 837 aa16.29■□□□□ 0.2
COMMD3-205ENST00000463688 PHF20L1A8MW92 1017 aa16.28■□□□□ 0.2
COMMD3-205ENST00000463688 APBB1O00213 710 aa16.28■□□□□ 0.2
COMMD3-205ENST00000463688 ASNSP08243 561 aa16.28■□□□□ 0.2
COMMD3-205ENST00000463688 ATP5JP18859 108 aa16.28■□□□□ 0.2
COMMD3-205ENST00000463688 MAGEB6Q8N7X4 407 aa16.28■□□□□ 0.2
COMMD3-205ENST00000463688 DDTLA6NHG4 134 aaPredicted RBP16.28■□□□□ 0.2
COMMD3-205ENST00000463688 PTPRAP18433 802 aa16.28■□□□□ 0.2
COMMD3-205ENST00000463688 SLC9C2Q5TAH2 1124 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms