RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 IQSEC3Q9UPP2 1182 aaPredicted RBP13.98□□□□□ -0.17
SSR3-202ENST00000463503 CAPN2P17655 700 aa13.97□□□□□ -0.17
SSR3-202ENST00000463503 FBXO33Q7Z6M2 555 aa13.97□□□□□ -0.17
SSR3-202ENST00000463503 C7orf61Q8IZ16 206 aa13.97□□□□□ -0.17
SSR3-202ENST00000463503 MRPL50Q8N5N7 158 aaKnown RBP13.97□□□□□ -0.17
SSR3-202ENST00000463503 SSH1Q8WYL5 1049 aa13.97□□□□□ -0.17
SSR3-202ENST00000463503 ZMYND8Q9ULU4 1186 aaPredicted RBP13.97□□□□□ -0.17
SSR3-202ENST00000463503 TFRCP02786 760 aaKnown RBP13.96□□□□□ -0.17
SSR3-202ENST00000463503 CCDC57Q2TAC2 916 aa13.96□□□□□ -0.17
SSR3-202ENST00000463503 BEND3Q5T5X7 828 aa13.96□□□□□ -0.17
SSR3-202ENST00000463503 TDHQ8IZJ6 230 aa13.96□□□□□ -0.17
SSR3-202ENST00000463503 TBC1D22AQ8WUA7 517 aa13.96□□□□□ -0.17
SSR3-202ENST00000463503 PUS3Q9BZE2 481 aaKnown RBP13.96□□□□□ -0.17
SSR3-202ENST00000463503 TMOD2Q9NZR1 351 aa13.96□□□□□ -0.17
SSR3-202ENST00000463503 KIF16BQ96L93 1317 aa13.95□□□□□ -0.18
SSR3-202ENST00000463503 MAGEA10P43363 369 aaPredicted RBP13.95□□□□□ -0.18
SSR3-202ENST00000463503 CHAF1AQ13111 956 aaPredicted RBP13.95□□□□□ -0.18
SSR3-202ENST00000463503 TAF7LQ5H9L4 462 aa13.95□□□□□ -0.18
SSR3-202ENST00000463503 NECAB2Q7Z6G3 386 aa13.95□□□□□ -0.18
SSR3-202ENST00000463503 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.95□□□□□ -0.18
SSR3-202ENST00000463503 ARHGAP45Q92619 1136 aa13.95□□□□□ -0.18
SSR3-202ENST00000463503 MRIQ9BWK5 157 aa13.95□□□□□ -0.18
SSR3-202ENST00000463503 RCAN3Q9UKA8 241 aa13.95□□□□□ -0.18
SSR3-202ENST00000463503 PTPRCP08575 1304 aa13.94□□□□□ -0.18
SSR3-202ENST00000463503 A0A0G2JLL6 359 aaPredicted RBP13.94□□□□□ -0.18
SSR3-202ENST00000463503 CXCL11O14625 94 aa13.94□□□□□ -0.18
SSR3-202ENST00000463503 PRRT2Q7Z6L0 340 aaPredicted RBP13.94□□□□□ -0.18
SSR3-202ENST00000463503 VGLL2Q8N8G2 317 aa13.94□□□□□ -0.18
SSR3-202ENST00000463503 ANKLE1Q8NAG6 615 aa13.94□□□□□ -0.18
SSR3-202ENST00000463503 FAM151AQ8WW52 585 aa13.94□□□□□ -0.18
SSR3-202ENST00000463503 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.94□□□□□ -0.18
SSR3-202ENST00000463503 SMC4Q9NTJ3 1288 aa13.94□□□□□ -0.18
SSR3-202ENST00000463503 RFX7Q2KHR2 1363 aa13.94□□□□□ -0.18
SSR3-202ENST00000463503 MAST3O60307 1309 aa13.93□□□□□ -0.18
SSR3-202ENST00000463503 SIPA1L1O43166 1804 aa13.93□□□□□ -0.18
SSR3-202ENST00000463503 F6X3S4 739 aa13.93□□□□□ -0.18
SSR3-202ENST00000463503 GRM8O00222 908 aa13.93□□□□□ -0.18
SSR3-202ENST00000463503 TNPO2O14787 897 aaKnown RBP13.93□□□□□ -0.18
SSR3-202ENST00000463503 SYN1P17600 705 aa13.93□□□□□ -0.18
SSR3-202ENST00000463503 NFIAQ12857 509 aa13.93□□□□□ -0.18
SSR3-202ENST00000463503 HHIPL2Q6UWX4 724 aa13.93□□□□□ -0.18
SSR3-202ENST00000463503 KAZALD1Q96I82 304 aa13.93□□□□□ -0.18
SSR3-202ENST00000463503 GUCD1Q96NT3 240 aa13.93□□□□□ -0.18
SSR3-202ENST00000463503 SLC45A1Q9Y2W3 748 aa13.93□□□□□ -0.18
SSR3-202ENST00000463503 SUGT1Q9Y2Z0 365 aa13.93□□□□□ -0.18
SSR3-202ENST00000463503 CDK5RAP2Q96SN8 1893 aa13.93□□□□□ -0.18
SSR3-202ENST00000463503 MROH5Q6ZUA9 1318 aa13.92□□□□□ -0.18
SSR3-202ENST00000463503 FAM198AQ9UFP1 575 aa13.92□□□□□ -0.18
SSR3-202ENST00000463503 RLFQ13129 1914 aa13.92□□□□□ -0.18
SSR3-202ENST00000463503 PFASO15067 1338 aa13.91□□□□□ -0.18
SSR3-202ENST00000463503 RPTORQ8N122 1335 aa13.91□□□□□ -0.18
SSR3-202ENST00000463503 PHF20L1A8MW92 1017 aa13.91□□□□□ -0.18
SSR3-202ENST00000463503 IPO8O15397 1037 aaKnown RBP13.91□□□□□ -0.18
SSR3-202ENST00000463503 TCP10Q12799 353 aa13.91□□□□□ -0.18
SSR3-202ENST00000463503 VPS37DQ86XT2 251 aa13.91□□□□□ -0.18
SSR3-202ENST00000463503 DAGLAQ9Y4D2 1042 aa13.91□□□□□ -0.18
SSR3-202ENST00000463503 BCAR3O75815 825 aa13.9□□□□□ -0.18
SSR3-202ENST00000463503 CENPBP07199 599 aaPredicted RBP13.9□□□□□ -0.18
SSR3-202ENST00000463503 CDC42EP5Q6NZY7 148 aa13.9□□□□□ -0.18
SSR3-202ENST00000463503 FASTKD5Q7L8L6 764 aaKnown RBP13.9□□□□□ -0.18
SSR3-202ENST00000463503 SCYL3Q8IZE3 742 aa13.9□□□□□ -0.18
SSR3-202ENST00000463503 NBPF3Q9H094 633 aa13.9□□□□□ -0.18
SSR3-202ENST00000463503 AFG3L2Q9Y4W6 797 aa13.9□□□□□ -0.18
SSR3-202ENST00000463503 FOCADQ5VW36 1801 aa13.9□□□□□ -0.18
SSR3-202ENST00000463503 POTEB2H3BUK9 544 aa13.89□□□□□ -0.19
SSR3-202ENST00000463503 HMGCRP04035 888 aa13.89□□□□□ -0.19
SSR3-202ENST00000463503 PTPRAP18433 802 aa13.89□□□□□ -0.19
SSR3-202ENST00000463503 TRIM32Q13049 653 aa13.89□□□□□ -0.19
SSR3-202ENST00000463503 LRRC24Q50LG9 513 aa13.89□□□□□ -0.19
SSR3-202ENST00000463503 GADL1Q6ZQY3 521 aa13.89□□□□□ -0.19
SSR3-202ENST00000463503 ZFPM1Q8IX07 1006 aa13.89□□□□□ -0.19
SSR3-202ENST00000463503 SMCR8Q8TEV9 937 aaPredicted RBP13.89□□□□□ -0.19
SSR3-202ENST00000463503 SUCLG2Q96I99 432 aa13.89□□□□□ -0.19
SSR3-202ENST00000463503 API5Q9BZZ5 524 aaKnown RBP13.89□□□□□ -0.19
SSR3-202ENST00000463503 UBE2OQ9C0C9 1292 aaKnown RBP13.89□□□□□ -0.19
SSR3-202ENST00000463503 TAOK2Q9UL54 1235 aa13.89□□□□□ -0.19
SSR3-202ENST00000463503 ZHX2Q9Y6X8 837 aa13.89□□□□□ -0.19
SSR3-202ENST00000463503 DIXDC1Q155Q3 683 aa13.88□□□□□ -0.19
SSR3-202ENST00000463503 FAM110CQ1W6H9 321 aa13.88□□□□□ -0.19
SSR3-202ENST00000463503 CAVIN4Q5BKX8 364 aa13.88□□□□□ -0.19
SSR3-202ENST00000463503 ANKRD13CQ8N6S4 541 aa13.88□□□□□ -0.19
SSR3-202ENST00000463503 C11orf49Q9H6J7 331 aa13.88□□□□□ -0.19
SSR3-202ENST00000463503 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.88□□□□□ -0.19
SSR3-202ENST00000463503 OGDHLQ9ULD0 1010 aa13.88□□□□□ -0.19
SSR3-202ENST00000463503 NOB1Q9ULX3 412 aaKnown RBP13.88□□□□□ -0.19
SSR3-202ENST00000463503 FRAT2O75474 233 aaPredicted RBP13.87□□□□□ -0.19
SSR3-202ENST00000463503 PDE8BO95263 885 aa13.87□□□□□ -0.19
SSR3-202ENST00000463503 SLURP2P0DP57 97 aa13.87□□□□□ -0.19
SSR3-202ENST00000463503 MS4A1P11836 297 aa13.87□□□□□ -0.19
SSR3-202ENST00000463503 FGFR2P21802 821 aa13.87□□□□□ -0.19
SSR3-202ENST00000463503 RABL6Q3YEC7 729 aaPredicted RBP13.87□□□□□ -0.19
SSR3-202ENST00000463503 TREML2Q5T2D2 321 aa13.87□□□□□ -0.19
SSR3-202ENST00000463503 ZKSCAN2Q63HK3 967 aa13.87□□□□□ -0.19
SSR3-202ENST00000463503 FAM109BQ6ICB4 259 aaPredicted RBP13.87□□□□□ -0.19
SSR3-202ENST00000463503 ATF7IPQ6VMQ6 1270 aa13.87□□□□□ -0.19
SSR3-202ENST00000463503 COA7Q96BR5 231 aa13.87□□□□□ -0.19
SSR3-202ENST00000463503 AGTPBP1Q9UPW5 1226 aa13.87□□□□□ -0.19
SSR3-202ENST00000463503 REV3LO60673 3130 aa13.86□□□□□ -0.19
SSR3-202ENST00000463503 COL6A1P12109 1028 aa13.86□□□□□ -0.19
SSR3-202ENST00000463503 PRDX5P30044 214 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms