RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 TM4SF4P48230 202 aa10.86□□□□□ -0.67
DDX39B-216ENST00000462421 DGKZQ13574 1117 aa10.86□□□□□ -0.67
DDX39B-216ENST00000462421 VGLL4Q14135 290 aa10.86□□□□□ -0.67
DDX39B-216ENST00000462421 TBC1D9Q6ZT07 1266 aa10.86□□□□□ -0.67
DDX39B-216ENST00000462421 NSUN4Q96CB9 384 aaKnown RBP10.86□□□□□ -0.67
DDX39B-216ENST00000462421 FAM163AQ96GL9 167 aaPredicted RBP10.86□□□□□ -0.67
DDX39B-216ENST00000462421 CLMNQ96JQ2 1002 aa10.86□□□□□ -0.67
DDX39B-216ENST00000462421 IDI2Q9BXS1 227 aa10.86□□□□□ -0.67
DDX39B-216ENST00000462421 DHX36Q9H2U1 1008 aaKnown RBP10.86□□□□□ -0.67
DDX39B-216ENST00000462421 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.86□□□□□ -0.67
DDX39B-216ENST00000462421 ZFYVE28Q9HCC9 887 aa10.86□□□□□ -0.67
DDX39B-216ENST00000462421 AATFQ9NY61 560 aaKnown RBP eCLIP10.86□□□□□ -0.67
DDX39B-216ENST00000462421 DBNLQ9UJU6 430 aaKnown RBP10.86□□□□□ -0.67
DDX39B-216ENST00000462421 FZD1Q9UP38 647 aa10.86□□□□□ -0.67
DDX39B-216ENST00000462421 THSD7BQ9C0I4 1608 aa10.86□□□□□ -0.67
DDX39B-216ENST00000462421 GPR75-ASB3A0A0A6YYF3 556 aa10.85□□□□□ -0.67
DDX39B-216ENST00000462421 CCL15-CCL14A0A0B4J2E2 113 aa10.85□□□□□ -0.67
DDX39B-216ENST00000462421 ZAP70P43403 619 aa10.85□□□□□ -0.67
DDX39B-216ENST00000462421 AAMPQ13685 434 aa10.85□□□□□ -0.67
DDX39B-216ENST00000462421 CCL15Q16663 113 aa10.85□□□□□ -0.67
DDX39B-216ENST00000462421 PI16Q6UXB8 463 aa10.85□□□□□ -0.67
DDX39B-216ENST00000462421 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.85□□□□□ -0.671e-34■■□□□ 12.6
DDX39B-216ENST00000462421 ECM29Q5VYK3 1845 aa10.84□□□□□ -0.67
DDX39B-216ENST00000462421 SPDYE5A6NIY4 337 aa10.84□□□□□ -0.67
DDX39B-216ENST00000462421 ERC2O15083 957 aa10.84□□□□□ -0.67
DDX39B-216ENST00000462421 FKTNO75072 461 aa10.84□□□□□ -0.67
DDX39B-216ENST00000462421 TBC1D8O95759 1140 aa10.84□□□□□ -0.67
DDX39B-216ENST00000462421 PPATQ06203 517 aa10.84□□□□□ -0.67
DDX39B-216ENST00000462421 NFIAQ12857 509 aa10.84□□□□□ -0.67
DDX39B-216ENST00000462421 PPIL2Q13356 520 aa10.84□□□□□ -0.67
DDX39B-216ENST00000462421 TAF1CQ15572 869 aaPredicted RBP10.84□□□□□ -0.67
DDX39B-216ENST00000462421 PKN2Q16513 984 aaKnown RBP10.84□□□□□ -0.67
DDX39B-216ENST00000462421 CTU1Q7Z7A3 348 aaKnown RBP10.84□□□□□ -0.67
DDX39B-216ENST00000462421 IFNL1Q8IU54 200 aa10.84□□□□□ -0.67
DDX39B-216ENST00000462421 MAGEB6Q8N7X4 407 aa10.84□□□□□ -0.67
DDX39B-216ENST00000462421 EAF2Q96CJ1 260 aaPredicted RBP10.84□□□□□ -0.67
DDX39B-216ENST00000462421 ERO1AQ96HE7 468 aa10.84□□□□□ -0.67
DDX39B-216ENST00000462421 TEPSINQ96N21 525 aa10.84□□□□□ -0.67
DDX39B-216ENST00000462421 TBC1D2Q9BYX2 928 aa10.84□□□□□ -0.67
DDX39B-216ENST00000462421 CRNKL1Q9BZJ0 848 aaKnown RBP10.84□□□□□ -0.67
DDX39B-216ENST00000462421 AS3MTQ9HBK9 375 aa10.84□□□□□ -0.67
DDX39B-216ENST00000462421 HERC5Q9UII4 1024 aaKnown RBP10.84□□□□□ -0.67
DDX39B-216ENST00000462421 AOX1Q06278 1338 aa10.84□□□□□ -0.67
DDX39B-216ENST00000462421 MAGEB6P1A0A0J9YX57 407 aa10.83□□□□□ -0.68
DDX39B-216ENST00000462421 CCDC85CA6NKD9 419 aa10.83□□□□□ -0.68
DDX39B-216ENST00000462421 CYP2E1P05181 493 aaPredicted RBP10.83□□□□□ -0.68
DDX39B-216ENST00000462421 SLC9C2Q5TAH2 1124 aa10.83□□□□□ -0.68
DDX39B-216ENST00000462421 FASTKD5Q7L8L6 764 aaKnown RBP10.83□□□□□ -0.68
DDX39B-216ENST00000462421 TTC6Q86TZ1 520 aa10.83□□□□□ -0.68
DDX39B-216ENST00000462421 SCYL3Q8IZE3 742 aa10.83□□□□□ -0.68
DDX39B-216ENST00000462421 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.83□□□□□ -0.68
DDX39B-216ENST00000462421 ZKSCAN4Q969J2 545 aaPredicted RBP10.83□□□□□ -0.68
DDX39B-216ENST00000462421 ZIC5Q96T25 663 aa10.83□□□□□ -0.68
DDX39B-216ENST00000462421 OSBPL5Q9H0X9 879 aaPredicted RBP10.83□□□□□ -0.68
DDX39B-216ENST00000462421 TLR7Q9NYK1 1049 aaKnown RBP10.83□□□□□ -0.68
DDX39B-216ENST00000462421 PI4KBQ9UBF8 816 aa10.83□□□□□ -0.68
DDX39B-216ENST00000462421 FAM198AQ9UFP1 575 aa10.83□□□□□ -0.68
DDX39B-216ENST00000462421 GPR25O00155 361 aa10.82□□□□□ -0.68
DDX39B-216ENST00000462421 GOLIM4O00461 696 aa10.82□□□□□ -0.68
DDX39B-216ENST00000462421 CTNND1O60716 968 aaKnown RBP10.82□□□□□ -0.68
DDX39B-216ENST00000462421 POLR3DP05423 398 aaPredicted RBP10.82□□□□□ -0.68
DDX39B-216ENST00000462421 PABPC4Q13310 644 aaKnown RBP eCLIP10.82□□□□□ -0.684e-35■■■□□ 18.4
DDX39B-216ENST00000462421 C20orf194Q5TEA3 1177 aa10.82□□□□□ -0.68
DDX39B-216ENST00000462421 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.82□□□□□ -0.68
DDX39B-216ENST00000462421 MAPKAPK5Q8IW41 473 aa10.82□□□□□ -0.68
DDX39B-216ENST00000462421 MIGA1Q8NAN2 632 aa10.82□□□□□ -0.68
DDX39B-216ENST00000462421 TGFBRAP1Q8WUH2 860 aa10.82□□□□□ -0.68
DDX39B-216ENST00000462421 PARK7Q99497 189 aaKnown RBP10.82□□□□□ -0.68
DDX39B-216ENST00000462421 ZCCHC17Q9NP64 241 aaKnown RBP10.82□□□□□ -0.68
DDX39B-216ENST00000462421 PAG1Q9NWQ8 432 aa10.82□□□□□ -0.68
DDX39B-216ENST00000462421 PNMA3Q9UL41 463 aa10.82□□□□□ -0.68
DDX39B-216ENST00000462421 SSC5DA1L4H1 1573 aa10.82□□□□□ -0.68
DDX39B-216ENST00000462421 POLR2AP24928 1970 aaKnown RBP10.81□□□□□ -0.68
DDX39B-216ENST00000462421 NOM1Q5C9Z4 860 aaKnown RBP10.81□□□□□ -0.68
DDX39B-216ENST00000462421 NOL9Q5SY16 702 aaKnown RBP10.81□□□□□ -0.68
DDX39B-216ENST00000462421 GADL1Q6ZQY3 521 aa10.81□□□□□ -0.68
DDX39B-216ENST00000462421 SH3RF3Q8TEJ3 882 aaPredicted RBP10.81□□□□□ -0.68
DDX39B-216ENST00000462421 BOLA2Q9H3K6 86 aa10.81□□□□□ -0.68
DDX39B-216ENST00000462421 CABP5Q9NP86 173 aa10.81□□□□□ -0.68
DDX39B-216ENST00000462421 PIH1D3Q9NQM4 214 aaKnown RBP10.81□□□□□ -0.68
DDX39B-216ENST00000462421 ECHDC1Q9NTX5 307 aa10.81□□□□□ -0.68
DDX39B-216ENST00000462421 TMOD4Q9NZQ9 345 aa10.81□□□□□ -0.68
DDX39B-216ENST00000462421 ZHX2Q9Y6X8 837 aa10.81□□□□□ -0.68
DDX39B-216ENST00000462421 ZNF646O15015 1829 aaPredicted RBP10.81□□□□□ -0.68
DDX39B-216ENST00000462421 CXCL11O14625 94 aa10.8□□□□□ -0.68
DDX39B-216ENST00000462421 TBC1D12O60347 775 aa10.8□□□□□ -0.68
DDX39B-216ENST00000462421 ATP5JP18859 108 aa10.8□□□□□ -0.68
DDX39B-216ENST00000462421 INPP5BP32019 993 aa10.8□□□□□ -0.68
DDX39B-216ENST00000462421 PPP4CP60510 307 aa10.8□□□□□ -0.68
DDX39B-216ENST00000462421 FOXP4Q8IVH2 680 aaPredicted RBP10.8□□□□□ -0.68
DDX39B-216ENST00000462421 CDAN1Q8IWY9 1227 aa10.8□□□□□ -0.68
DDX39B-216ENST00000462421 SMCR8Q8TEV9 937 aaPredicted RBP10.8□□□□□ -0.68
DDX39B-216ENST00000462421 ZNF296Q8WUU4 475 aaPredicted RBP10.8□□□□□ -0.68
DDX39B-216ENST00000462421 GCC1Q96CN9 775 aa10.8□□□□□ -0.68
DDX39B-216ENST00000462421 ABHD8Q96I13 439 aa10.8□□□□□ -0.68
DDX39B-216ENST00000462421 MCOLN1Q9GZU1 580 aa10.8□□□□□ -0.68
DDX39B-216ENST00000462421 RWDD1Q9H446 243 aaPredicted RBP10.8□□□□□ -0.68
DDX39B-216ENST00000462421 CWC22Q9HCG8 908 aaKnown RBP10.8□□□□□ -0.68
DDX39B-216ENST00000462421 GINM1Q9NU53 330 aa10.8□□□□□ -0.68
DDX39B-216ENST00000462421 SAP30BPQ9UHR5 308 aaKnown RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms