RNA–Protein interactions for RNA: ENST00000462181.1

CALD1-213, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 188 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-213ENST00000462181 FAM105AQ9NUU6 356 aa9.28□□□□□ -0.92
CALD1-213ENST00000462181 DCDC2CA8MYV0 355 aa9.27□□□□□ -0.93
CALD1-213ENST00000462181 MINDY4BA8MYZ0 360 aa9.27□□□□□ -0.93
CALD1-213ENST00000462181 PTPN11Q06124 597 aaPredicted RBP9.27□□□□□ -0.93
CALD1-213ENST00000462181 SEPT6Q14141 434 aa9.27□□□□□ -0.93
CALD1-213ENST00000462181 ELMO3Q96BJ8 720 aa9.27□□□□□ -0.93
CALD1-213ENST00000462181 FAM83CQ9BQN1 747 aa9.27□□□□□ -0.93
CALD1-213ENST00000462181 GSX1Q9H4S2 264 aaPredicted RBP9.27□□□□□ -0.93
CALD1-213ENST00000462181 PICK1Q9NRD5 415 aa9.27□□□□□ -0.93
CALD1-213ENST00000462181 DISC1Q9NRI5 854 aa9.27□□□□□ -0.93
CALD1-213ENST00000462181 KIAA1522Q9P206 1035 aaPredicted RBP9.27□□□□□ -0.93
CALD1-213ENST00000462181 CSADQ9Y600 493 aa9.27□□□□□ -0.93
CALD1-213ENST00000462181 FAM95CA0A1B0GW59 222 aa9.26□□□□□ -0.93
CALD1-213ENST00000462181 K7ELQ4 463 aaPredicted RBP9.26□□□□□ -0.93
CALD1-213ENST00000462181 RECKO95980 971 aa9.26□□□□□ -0.93
CALD1-213ENST00000462181 ZNF76P36508 570 aa9.26□□□□□ -0.93
CALD1-213ENST00000462181 ERVK-24P63145 666 aa9.26□□□□□ -0.93
CALD1-213ENST00000462181 NFKBIBQ15653 356 aa9.26□□□□□ -0.93
CALD1-213ENST00000462181 TRIM42Q8IWZ5 723 aa9.26□□□□□ -0.93
CALD1-213ENST00000462181 JARID2Q92833 1246 aaPredicted RBP9.26□□□□□ -0.93
CALD1-213ENST00000462181 GAL3ST3Q96A11 431 aa9.26□□□□□ -0.93
CALD1-213ENST00000462181 METTL5Q9NRN9 209 aaKnown RBP9.26□□□□□ -0.93
CALD1-213ENST00000462181 KBTBD4Q9NVX7 518 aa9.26□□□□□ -0.93
CALD1-213ENST00000462181 HMX2A2RU54 273 aa9.25□□□□□ -0.93
CALD1-213ENST00000462181 SCAMP3O14828 347 aaKnown RBP9.25□□□□□ -0.93
CALD1-213ENST00000462181 RNGTTO60942 597 aaKnown RBP9.25□□□□□ -0.93
CALD1-213ENST00000462181 PF4P02776 101 aa9.25□□□□□ -0.93
CALD1-213ENST00000462181 NFICP08651 508 aa9.25□□□□□ -0.93
CALD1-213ENST00000462181 RBM25P49756 843 aaKnown RBP9.25□□□□□ -0.93
CALD1-213ENST00000462181 LMNB2Q03252 620 aa9.25□□□□□ -0.93
CALD1-213ENST00000462181 CAMK2GQ13555 558 aaPredicted RBP9.25□□□□□ -0.93
CALD1-213ENST00000462181 MAP7Q14244 749 aa9.25□□□□□ -0.93
CALD1-213ENST00000462181 TTLL4Q14679 1199 aa9.25□□□□□ -0.93
CALD1-213ENST00000462181 PAOXQ6QHF9 649 aa9.25□□□□□ -0.93
CALD1-213ENST00000462181 ERMP1Q7Z2K6 904 aa9.25□□□□□ -0.93
CALD1-213ENST00000462181 HDXQ7Z353 690 aa9.25□□□□□ -0.93
CALD1-213ENST00000462181 C12orf40Q86WS4 652 aa9.25□□□□□ -0.93
CALD1-213ENST00000462181 EZH1Q92800 747 aaPredicted RBP9.25□□□□□ -0.93
CALD1-213ENST00000462181 ZNF428Q96B54 188 aa9.25□□□□□ -0.93
CALD1-213ENST00000462181 C7orf69Q9H7B7 122 aa9.25□□□□□ -0.93
CALD1-213ENST00000462181 COPRSQ9NQ92 184 aa9.25□□□□□ -0.93
CALD1-213ENST00000462181 HCLS1P14317 486 aaPredicted RBP9.24□□□□□ -0.93
CALD1-213ENST00000462181 INPP5AQ14642 412 aa9.24□□□□□ -0.93
CALD1-213ENST00000462181 PPM1JQ5JR12 505 aa9.24□□□□□ -0.93
CALD1-213ENST00000462181 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.24□□□□□ -0.93
CALD1-213ENST00000462181 RNF214Q8ND24 703 aa9.24□□□□□ -0.93
CALD1-213ENST00000462181 RNF34Q969K3 372 aa9.24□□□□□ -0.93
CALD1-213ENST00000462181 ACSS3Q9H6R3 686 aa9.24□□□□□ -0.93
CALD1-213ENST00000462181 SSU72Q9NP77 194 aaKnown RBP9.24□□□□□ -0.93
CALD1-213ENST00000462181 SNCAIPQ9Y6H5 919 aa9.24□□□□□ -0.93
CALD1-213ENST00000462181 GSC2O15499 205 aa9.23□□□□□ -0.93
CALD1-213ENST00000462181 FANCCQ00597 558 aa9.23□□□□□ -0.93
CALD1-213ENST00000462181 LRFN4Q6PJG9 635 aa9.23□□□□□ -0.93
CALD1-213ENST00000462181 CCDC84Q86UT8 332 aaPredicted RBP9.23□□□□□ -0.93
CALD1-213ENST00000462181 SMYD4Q8IYR2 804 aaPredicted RBP9.23□□□□□ -0.93
CALD1-213ENST00000462181 PLPPR2Q96GM1 343 aa9.23□□□□□ -0.93
CALD1-213ENST00000462181 RHOVQ96L33 236 aa9.23□□□□□ -0.93
CALD1-213ENST00000462181 SEMA6CQ9H3T2 930 aa9.23□□□□□ -0.93
CALD1-213ENST00000462181 DAGLAQ9Y4D2 1042 aa9.23□□□□□ -0.93
CALD1-213ENST00000462181 FSTP19883 344 aa9.22□□□□□ -0.93
CALD1-213ENST00000462181 FAM160A1Q05DH4 1040 aa9.22□□□□□ -0.93
CALD1-213ENST00000462181 SNAP47Q5SQN1 464 aa9.22□□□□□ -0.93
CALD1-213ENST00000462181 PRAMEF27A3QJZ7 478 aa9.21□□□□□ -0.94
CALD1-213ENST00000462181 PRSS36Q5K4E3 855 aa9.21□□□□□ -0.94
CALD1-213ENST00000462181 WIPI1Q5MNZ9 446 aaPredicted RBP9.21□□□□□ -0.94
CALD1-213ENST00000462181 RNF43Q68DV7 783 aa9.21□□□□□ -0.94
CALD1-213ENST00000462181 BNC2Q6ZN30 1099 aaPredicted RBP9.21□□□□□ -0.94
CALD1-213ENST00000462181 SLC51AQ86UW1 340 aa9.21□□□□□ -0.94
CALD1-213ENST00000462181 GOLM1Q8NBJ4 401 aa9.21□□□□□ -0.94
CALD1-213ENST00000462181 LGR6Q9HBX8 967 aa9.21□□□□□ -0.94
CALD1-213ENST00000462181 PCOLCE2Q9UKZ9 415 aa9.21□□□□□ -0.94
CALD1-213ENST00000462181 FANCGO15287 622 aa9.2□□□□□ -0.94
CALD1-213ENST00000462181 ADAM23O75077 832 aa9.2□□□□□ -0.94
CALD1-213ENST00000462181 BPNT1O95861 308 aa9.2□□□□□ -0.94
CALD1-213ENST00000462181 IGLV1-40P01703 118 aa9.2□□□□□ -0.94
CALD1-213ENST00000462181 EIF4A3P38919 411 aaKnown RBP9.2□□□□□ -0.94
CALD1-213ENST00000462181 CDK8P49336 464 aa9.2□□□□□ -0.94
CALD1-213ENST00000462181 RPL6Q02878 288 aaKnown RBP9.2□□□□□ -0.94
CALD1-213ENST00000462181 RING1Q06587 406 aa9.2□□□□□ -0.94
CALD1-213ENST00000462181 NFIAQ12857 509 aa9.2□□□□□ -0.94
CALD1-213ENST00000462181 GATAD2BQ8WXI9 593 aa9.2□□□□□ -0.94
CALD1-213ENST00000462181 ISL2Q96A47 359 aa9.2□□□□□ -0.94
CALD1-213ENST00000462181 NEFMP07197 916 aa9.19□□□□□ -0.94
CALD1-213ENST00000462181 CDC37L1Q7L3B6 337 aa9.19□□□□□ -0.94
CALD1-213ENST00000462181 CYFIP1Q7L576 1253 aa9.19□□□□□ -0.94
CALD1-213ENST00000462181 USP48Q86UV5 1035 aa9.19□□□□□ -0.94
CALD1-213ENST00000462181 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.19□□□□□ -0.94
CALD1-213ENST00000462181 F13A1P00488 732 aa9.18□□□□□ -0.94
CALD1-213ENST00000462181 ZBTB37Q5TC79 503 aa9.18□□□□□ -0.94
CALD1-213ENST00000462181 FBXL19Q6PCT2 694 aa9.18□□□□□ -0.94
CALD1-213ENST00000462181 FBXL6Q8N531 539 aa9.18□□□□□ -0.94
CALD1-213ENST00000462181 GIMAP7Q8NHV1 300 aa9.18□□□□□ -0.94
CALD1-213ENST00000462181 ZNF507Q8TCN5 953 aa9.18□□□□□ -0.94
CALD1-213ENST00000462181 MFSD14AQ96MC6 490 aa9.18□□□□□ -0.94
CALD1-213ENST00000462181 TBC1D32Q96NH3 1257 aa9.18□□□□□ -0.94
CALD1-213ENST00000462181 DBNDD2Q9BQY9 259 aa9.18□□□□□ -0.94
CALD1-213ENST00000462181 SUPT16HQ9Y5B9 1047 aaKnown RBP9.18□□□□□ -0.94
CALD1-213ENST00000462181 FAM221AA4D161 298 aa9.17□□□□□ -0.94
CALD1-213ENST00000462181 GFRA2O00451 464 aa9.17□□□□□ -0.94
CALD1-213ENST00000462181 CILPO75339 1184 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms