RNA–Protein interactions for RNA: ENST00000460677.5

PCYT1A-212, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 1 (best)

Gene PCYT1A, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-212ENST00000460677 NEDD4P46934 1319 aa18.72■□□□□ 0.59
PCYT1A-212ENST00000460677 LTBP3Q9NS15 1303 aa18.72■□□□□ 0.59
PCYT1A-212ENST00000460677 PSME4Q14997 1843 aa18.72■□□□□ 0.59
PCYT1A-212ENST00000460677 PRC1O43663 620 aa18.71■□□□□ 0.59
PCYT1A-212ENST00000460677 CRKP46108 304 aa18.71■□□□□ 0.59
PCYT1A-212ENST00000460677 ANTXR2P58335 489 aa18.71■□□□□ 0.59
PCYT1A-212ENST00000460677 KIAA0825Q8IV33 1275 aa18.71■□□□□ 0.59
PCYT1A-212ENST00000460677 TGFBRAP1Q8WUH2 860 aa18.71■□□□□ 0.59
PCYT1A-212ENST00000460677 MYO3BQ8WXR4 1341 aa18.71■□□□□ 0.59
PCYT1A-212ENST00000460677 BAZ2AQ9UIF9 1905 aaKnown RBP18.71■□□□□ 0.59
PCYT1A-212ENST00000460677 B4E1Z4 1266 aa18.7■□□□□ 0.58
PCYT1A-212ENST00000460677 LARGE1O95461 756 aa18.7■□□□□ 0.58
PCYT1A-212ENST00000460677 VIL1P09327 827 aaKnown RBP18.7■□□□□ 0.58
PCYT1A-212ENST00000460677 PCP11498 1178 aaKnown RBP18.7■□□□□ 0.58
PCYT1A-212ENST00000460677 ME3Q16798 604 aa18.7■□□□□ 0.58
PCYT1A-212ENST00000460677 RSBN1LQ6PCB5 846 aaPredicted RBP18.7■□□□□ 0.58
PCYT1A-212ENST00000460677 CHST3Q7LGC8 479 aa18.7■□□□□ 0.58
PCYT1A-212ENST00000460677 BRF1Q92994 677 aa18.7■□□□□ 0.58
PCYT1A-212ENST00000460677 ZDHHC15Q96MV8 337 aa18.7■□□□□ 0.58
PCYT1A-212ENST00000460677 INCENPQ9NQS7 918 aa18.7■□□□□ 0.58
PCYT1A-212ENST00000460677 MCM9Q9NXL9 1143 aa18.7■□□□□ 0.58
PCYT1A-212ENST00000460677 CHMP5Q9NZZ3 219 aa18.7■□□□□ 0.58
PCYT1A-212ENST00000460677 CIZ1Q9ULV3 898 aaPredicted RBP18.7■□□□□ 0.58
PCYT1A-212ENST00000460677 ARFGEF1Q9Y6D6 1849 aa18.7■□□□□ 0.58
PCYT1A-212ENST00000460677 CYP2D7A0A087X1C5 515 aa18.69■□□□□ 0.58
PCYT1A-212ENST00000460677 FGRP09769 529 aa18.69■□□□□ 0.58
PCYT1A-212ENST00000460677 CYB5R4Q7L1T6 521 aa18.69■□□□□ 0.58
PCYT1A-212ENST00000460677 FHDC1Q9C0D6 1143 aaPredicted RBP18.69■□□□□ 0.58
PCYT1A-212ENST00000460677 SERPINA10Q9UK55 444 aa18.69■□□□□ 0.58
PCYT1A-212ENST00000460677 PSMD14O00487 310 aa18.68■□□□□ 0.58
PCYT1A-212ENST00000460677 RAD17O75943 681 aa18.68■□□□□ 0.58
PCYT1A-212ENST00000460677 SLC3A2P08195 630 aaKnown RBP18.68■□□□□ 0.58
PCYT1A-212ENST00000460677 USP17L8P0C7I0 530 aa18.68■□□□□ 0.58
PCYT1A-212ENST00000460677 C12orf60Q5U649 245 aa18.68■□□□□ 0.58
PCYT1A-212ENST00000460677 APOBEC3HQ6NTF7 200 aaKnown RBP18.68■□□□□ 0.58
PCYT1A-212ENST00000460677 MAPKAPK5Q8IW41 473 aa18.68■□□□□ 0.58
PCYT1A-212ENST00000460677 AMOTL1Q8IY63 956 aa18.68■□□□□ 0.58
PCYT1A-212ENST00000460677 JDP2Q8WYK2 163 aa18.68■□□□□ 0.58
PCYT1A-212ENST00000460677 USP40Q9NVE5 1235 aa18.68■□□□□ 0.58
PCYT1A-212ENST00000460677 LAMB1P07942 1786 aa18.68■□□□□ 0.58
PCYT1A-212ENST00000460677 FLT1P17948 1338 aa18.68■□□□□ 0.58
PCYT1A-212ENST00000460677 KDM4AO75164 1064 aa18.68■□□□□ 0.58
PCYT1A-212ENST00000460677 CYP2D6P10635 497 aa18.68■□□□□ 0.58
PCYT1A-212ENST00000460677 RRP12Q5JTH9 1297 aaKnown RBP18.68■□□□□ 0.58
PCYT1A-212ENST00000460677 NKX2-3Q8TAU0 364 aa18.68■□□□□ 0.58
PCYT1A-212ENST00000460677 TMEM87BQ96K49 555 aa18.68■□□□□ 0.58
PCYT1A-212ENST00000460677 GMLQ99445 158 aa18.68■□□□□ 0.58
PCYT1A-212ENST00000460677 TOMM22Q9NS69 142 aa18.68■□□□□ 0.58
PCYT1A-212ENST00000460677 ZSWIM5Q9P217 1185 aa18.68■□□□□ 0.58
PCYT1A-212ENST00000460677 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.68■□□□□ 0.58
PCYT1A-212ENST00000460677 NAV1Q8NEY1 1877 aa18.67■□□□□ 0.58
PCYT1A-212ENST00000460677 CDK5RAP2Q96SN8 1893 aa18.67■□□□□ 0.58
PCYT1A-212ENST00000460677 SMIM22K7EJ46 135 aa18.67■□□□□ 0.58
PCYT1A-212ENST00000460677 EVCP57679 992 aa18.67■□□□□ 0.58
PCYT1A-212ENST00000460677 APOBRQ0VD83 1088 aa18.67■□□□□ 0.58
PCYT1A-212ENST00000460677 CDC42EP5Q6NZY7 148 aa18.67■□□□□ 0.58
PCYT1A-212ENST00000460677 CCDC83Q8IWF9 413 aa18.67■□□□□ 0.58
PCYT1A-212ENST00000460677 STK11IPQ8N1F8 1099 aa18.67■□□□□ 0.58
PCYT1A-212ENST00000460677 ESR2Q92731 530 aa18.67■□□□□ 0.58
PCYT1A-212ENST00000460677 ZNF274Q96GC6 653 aaPredicted RBP18.67■□□□□ 0.58
PCYT1A-212ENST00000460677 MTA3Q9BTC8 594 aa18.67■□□□□ 0.58
PCYT1A-212ENST00000460677 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.67■□□□□ 0.58
PCYT1A-212ENST00000460677 ROBO3Q96MS0 1386 aa18.66■□□□□ 0.58
PCYT1A-212ENST00000460677 FOCADQ5VW36 1801 aa18.66■□□□□ 0.58
PCYT1A-212ENST00000460677 ORC4O43929 436 aa18.66■□□□□ 0.58
PCYT1A-212ENST00000460677 POLR3DP05423 398 aaPredicted RBP18.66■□□□□ 0.58
PCYT1A-212ENST00000460677 RBM5P52756 815 aaKnown RBP eCLIP18.66■□□□□ 0.58
PCYT1A-212ENST00000460677 CXCL9Q07325 125 aa18.66■□□□□ 0.58
PCYT1A-212ENST00000460677 ST3GAL1Q11201 340 aa18.66■□□□□ 0.58
PCYT1A-212ENST00000460677 NECAB1Q8N987 351 aa18.66■□□□□ 0.58
PCYT1A-212ENST00000460677 AGBL3Q8NEM8 1001 aa18.66■□□□□ 0.58
PCYT1A-212ENST00000460677 GPHNQ9NQX3 736 aaPredicted RBP18.66■□□□□ 0.58
PCYT1A-212ENST00000460677 ANGEL1Q9UNK9 670 aaKnown RBP18.66■□□□□ 0.58
PCYT1A-212ENST00000460677 ADAMTSL1Q8N6G6 1762 aa18.66■□□□□ 0.58
PCYT1A-212ENST00000460677 DDX60LQ5H9U9 1706 aaKnown RBP18.65■□□□□ 0.58
PCYT1A-212ENST00000460677 SH2B2O14492 632 aaPredicted RBP18.65■□□□□ 0.58
PCYT1A-212ENST00000460677 PFKFB2O60825 505 aa18.65■□□□□ 0.58
PCYT1A-212ENST00000460677 WDHD1O75717 1129 aaPredicted RBP18.65■□□□□ 0.58
PCYT1A-212ENST00000460677 NT5C2P49902 561 aa18.65■□□□□ 0.58
PCYT1A-212ENST00000460677 RASSF7Q02833 373 aa18.65■□□□□ 0.58
PCYT1A-212ENST00000460677 EVX2Q03828 476 aa18.65■□□□□ 0.58
PCYT1A-212ENST00000460677 PDE4BQ07343 736 aa18.65■□□□□ 0.58
PCYT1A-212ENST00000460677 CIAPIN1Q6FI81 312 aa18.65■□□□□ 0.58
PCYT1A-212ENST00000460677 IGDCC4Q8TDY8 1250 aa18.65■□□□□ 0.58
PCYT1A-212ENST00000460677 SAP30BPQ9UHR5 308 aaKnown RBP18.65■□□□□ 0.58
PCYT1A-212ENST00000460677 HDAC9Q9UKV0 1011 aa18.65■□□□□ 0.58
PCYT1A-212ENST00000460677 STK3Q13188 491 aa18.64■□□□□ 0.57
PCYT1A-212ENST00000460677 SART3Q15020 963 aaKnown RBP18.64■□□□□ 0.57
PCYT1A-212ENST00000460677 TNIP1Q15025 636 aa18.64■□□□□ 0.57
PCYT1A-212ENST00000460677 CFAP100Q494V2 611 aa18.64■□□□□ 0.57
PCYT1A-212ENST00000460677 GTF3C6Q969F1 213 aa18.64■□□□□ 0.57
PCYT1A-212ENST00000460677 IFIT3O14879 490 aaKnown RBP18.63■□□□□ 0.57
PCYT1A-212ENST00000460677 PRDM1O75626 825 aa18.63■□□□□ 0.57
PCYT1A-212ENST00000460677 PDIA3P30101 505 aaKnown RBP18.63■□□□□ 0.57
PCYT1A-212ENST00000460677 LIFRP42702 1097 aa18.63■□□□□ 0.57
PCYT1A-212ENST00000460677 PLCD1P51178 756 aa18.63■□□□□ 0.57
PCYT1A-212ENST00000460677 PICALMQ13492 652 aa18.63■□□□□ 0.57
PCYT1A-212ENST00000460677 TMEM67Q5HYA8 995 aa18.63■□□□□ 0.57
PCYT1A-212ENST00000460677 SYT17Q9BSW7 474 aa18.63■□□□□ 0.57
PCYT1A-212ENST00000460677 DDX4Q9NQI0 724 aaKnown RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms