RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 IDI2Q9BXS1 227 aa27.12■■□□□ 1.93
C9orf3-209ENST00000460573 AATFQ9NY61 560 aaKnown RBP eCLIP27.12■■□□□ 1.93
C9orf3-209ENST00000460573 TRIM6-TRIM34B2RNG4 842 aa27.11■■□□□ 1.93
C9orf3-209ENST00000460573 TCP10L2B9ZVM9 353 aa27.11■■□□□ 1.93
C9orf3-209ENST00000460573 RNF113AO15541 343 aaKnown RBP27.11■■□□□ 1.93
C9orf3-209ENST00000460573 FKBP1BP68106 108 aa27.11■■□□□ 1.93
C9orf3-209ENST00000460573 PAPPA2Q9BXP8 1791 aa27.1■■□□□ 1.93
C9orf3-209ENST00000460573 NPM3O75607 178 aaKnown RBP27.1■■□□□ 1.93
C9orf3-209ENST00000460573 RASA3Q14644 834 aa27.1■■□□□ 1.93
C9orf3-209ENST00000460573 TTC22Q5TAA0 569 aa27.1■■□□□ 1.93
C9orf3-209ENST00000460573 MAGEB6P1A0A0J9YX57 407 aa27.09■■□□□ 1.93
C9orf3-209ENST00000460573 ENTPD3O75355 529 aa27.09■■□□□ 1.93
C9orf3-209ENST00000460573 CACNB3P54284 484 aa27.09■■□□□ 1.93
C9orf3-209ENST00000460573 PRAMEF18Q5VWM3 479 aa27.09■■□□□ 1.93
C9orf3-209ENST00000460573 MYH7P12883 1935 aa27.08■■□□□ 1.93
C9orf3-209ENST00000460573 TEX11Q8IYF3 940 aa27.08■■□□□ 1.93
C9orf3-209ENST00000460573 MIGA1Q8NAN2 632 aa27.08■■□□□ 1.93
C9orf3-209ENST00000460573 FAM151AQ8WW52 585 aa27.08■■□□□ 1.93
C9orf3-209ENST00000460573 RILPL2Q969X0 211 aa27.08■■□□□ 1.93
C9orf3-209ENST00000460573 RFX7Q2KHR2 1363 aa27.08■■□□□ 1.93
C9orf3-209ENST00000460573 WDHD1O75717 1129 aaPredicted RBP27.07■■□□□ 1.92
C9orf3-209ENST00000460573 SUPT20HL1Q3ZLR7 823 aa27.07■■□□□ 1.92
C9orf3-209ENST00000460573 SH3RF3Q8TEJ3 882 aaPredicted RBP27.07■■□□□ 1.92
C9orf3-209ENST00000460573 APPBP2Q92624 585 aa27.07■■□□□ 1.92
C9orf3-209ENST00000460573 RIOK1Q9BRS2 568 aaKnown RBP27.07■■□□□ 1.92
C9orf3-209ENST00000460573 DYNLL1P63167 89 aaKnown RBP27.06■■□□□ 1.92
C9orf3-209ENST00000460573 KIF23Q02241 960 aaPredicted RBP27.06■■□□□ 1.92
C9orf3-209ENST00000460573 NFIAQ12857 509 aa27.06■■□□□ 1.92
C9orf3-209ENST00000460573 FAM198AQ9UFP1 575 aa27.06■■□□□ 1.92
C9orf3-209ENST00000460573 RPAP1Q9BWH6 1393 aaPredicted RBP27.06■■□□□ 1.92
C9orf3-209ENST00000460573 SLC10A3P09131 477 aa27.05■■□□□ 1.92
C9orf3-209ENST00000460573 RGS3P49796 1198 aa27.05■■□□□ 1.92
C9orf3-209ENST00000460573 ARMC9Q7Z3E5 817 aa27.05■■□□□ 1.92
C9orf3-209ENST00000460573 HOOK2Q96ED9 719 aa27.05■■□□□ 1.92
C9orf3-209ENST00000460573 FAM155AB1AL88 458 aaPredicted RBP27.04■■□□□ 1.92
C9orf3-209ENST00000460573 PRKG1Q13976 671 aa27.04■■□□□ 1.92
C9orf3-209ENST00000460573 ZIC5Q96T25 663 aa27.04■■□□□ 1.92
C9orf3-209ENST00000460573 CRNKL1Q9BZJ0 848 aaKnown RBP27.04■■□□□ 1.92
C9orf3-209ENST00000460573 TMEM39BQ9GZU3 492 aa27.04■■□□□ 1.92
C9orf3-209ENST00000460573 UBE2Q2LH0YL09 131 aa27.03■■□□□ 1.92
C9orf3-209ENST00000460573 TCP10Q12799 353 aa27.03■■□□□ 1.92
C9orf3-209ENST00000460573 ZMYM1Q5SVZ6 1142 aa27.03■■□□□ 1.92
C9orf3-209ENST00000460573 TEPSINQ96N21 525 aa27.03■■□□□ 1.92
C9orf3-209ENST00000460573 PUS7LQ9H0K6 701 aaKnown RBP27.03■■□□□ 1.92
C9orf3-209ENST00000460573 HIP1O00291 1037 aa27.02■■□□□ 1.92
C9orf3-209ENST00000460573 GSPT1P15170 499 aaKnown RBP27.02■■□□□ 1.92
C9orf3-209ENST00000460573 PICALMQ13492 652 aa27.02■■□□□ 1.92
C9orf3-209ENST00000460573 SLFNL1Q499Z3 407 aa27.02■■□□□ 1.92
C9orf3-209ENST00000460573 MOB2Q70IA6 237 aa27.02■■□□□ 1.92
C9orf3-209ENST00000460573 RASAL3Q86YV0 1011 aa27.02■■□□□ 1.92
C9orf3-209ENST00000460573 TGFBRAP1Q8WUH2 860 aa27.02■■□□□ 1.92
C9orf3-209ENST00000460573 DDX4Q9NQI0 724 aaKnown RBP27.02■■□□□ 1.92
C9orf3-209ENST00000460573 CASP8AP2Q9UKL3 1982 aa27.01■■□□□ 1.91
C9orf3-209ENST00000460573 MBD4O95243 580 aa27.01■■□□□ 1.91
C9orf3-209ENST00000460573 CHGBP05060 677 aa27.01■■□□□ 1.91
C9orf3-209ENST00000460573 USP5P45974 858 aa27.01■■□□□ 1.91
C9orf3-209ENST00000460573 NBPF12Q5TAG4 269 aaPredicted RBP27.01■■□□□ 1.91
C9orf3-209ENST00000460573 REM2Q8IYK8 340 aaPredicted RBP27.01■■□□□ 1.91
C9orf3-209ENST00000460573 LCORLQ8N3X6 602 aa27.01■■□□□ 1.91
C9orf3-209ENST00000460573 OSBP2Q969R2 916 aa27.01■■□□□ 1.91
C9orf3-209ENST00000460573 OSBPL5Q9H0X9 879 aaPredicted RBP27.01■■□□□ 1.91
C9orf3-209ENST00000460573 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.01■■□□□ 1.91
C9orf3-209ENST00000460573 COL2A1P02458 1487 aaPredicted RBP27■■□□□ 1.91
C9orf3-209ENST00000460573 SDSP20132 328 aa27■■□□□ 1.91
C9orf3-209ENST00000460573 ARMT1Q9H993 441 aa27■■□□□ 1.91
C9orf3-209ENST00000460573 HELLSQ9NRZ9 838 aa27■■□□□ 1.91
C9orf3-209ENST00000460573 DHX36Q9H2U1 1008 aaKnown RBP26.99■■□□□ 1.91
C9orf3-209ENST00000460573 ATRNL1Q5VV63 1379 aa26.98■■□□□ 1.91
C9orf3-209ENST00000460573 FLT1P17948 1338 aa26.98■■□□□ 1.91
C9orf3-209ENST00000460573 PPP1R12BO60237 982 aaPredicted RBP26.98■■□□□ 1.91
C9orf3-209ENST00000460573 GNAT2P19087 354 aa26.98■■□□□ 1.91
C9orf3-209ENST00000460573 MAPKAPK5Q8IW41 473 aa26.98■■□□□ 1.91
C9orf3-209ENST00000460573 ZSCAN29Q8IWY8 852 aaPredicted RBP26.98■■□□□ 1.91
C9orf3-209ENST00000460573 ZFPM1Q8IX07 1006 aa26.98■■□□□ 1.91
C9orf3-209ENST00000460573 STRBPQ96SI9 672 aaKnown RBP26.98■■□□□ 1.91
C9orf3-209ENST00000460573 ATP8A2Q9NTI2 1148 aa26.98■■□□□ 1.91
C9orf3-209ENST00000460573 SAGE1Q9NXZ1 904 aa26.98■■□□□ 1.91
C9orf3-209ENST00000460573 ANGEL1Q9UNK9 670 aaKnown RBP26.98■■□□□ 1.91
C9orf3-209ENST00000460573 TRPA1O75762 1119 aa26.97■■□□□ 1.91
C9orf3-209ENST00000460573 FOCADQ5VW36 1801 aa26.97■■□□□ 1.91
C9orf3-209ENST00000460573 AK9Q5TCS8 1911 aa26.96■■□□□ 1.91
C9orf3-209ENST00000460573 GPAA1O43292 621 aa26.96■■□□□ 1.91
C9orf3-209ENST00000460573 BMP2KLQ5H9B9 411 aa26.96■■□□□ 1.91
C9orf3-209ENST00000460573 DCAF15Q66K64 600 aa26.96■■□□□ 1.91
C9orf3-209ENST00000460573 DDRGK1Q96HY6 314 aa26.96■■□□□ 1.91
C9orf3-209ENST00000460573 CSRNP1Q96S65 589 aa26.96■■□□□ 1.91
C9orf3-209ENST00000460573 DIAPH3Q9NSV4 1193 aa26.96■■□□□ 1.91
C9orf3-209ENST00000460573 SLC4A4Q9Y6R1 1079 aa26.96■■□□□ 1.91
C9orf3-209ENST00000460573 DDTLA6NHG4 134 aaPredicted RBP26.95■■□□□ 1.9
C9orf3-209ENST00000460573 M0R2C6 588 aa26.95■■□□□ 1.9
C9orf3-209ENST00000460573 MKRN3Q13064 507 aaKnown RBP26.95■■□□□ 1.9
C9orf3-209ENST00000460573 MCMDC2Q4G0Z9 681 aa26.95■■□□□ 1.9
C9orf3-209ENST00000460573 SH3BP5LQ7L8J4 393 aa26.95■■□□□ 1.9
C9orf3-209ENST00000460573 SKAP1Q86WV1 359 aa26.95■■□□□ 1.9
C9orf3-209ENST00000460573 ABHD8Q96I13 439 aa26.95■■□□□ 1.9
C9orf3-209ENST00000460573 CDK5RAP2Q96SN8 1893 aa26.94■■□□□ 1.9
C9orf3-209ENST00000460573 UNCXA6NJT0 531 aa26.94■■□□□ 1.9
C9orf3-209ENST00000460573 MAP3K11Q16584 847 aa26.94■■□□□ 1.9
C9orf3-209ENST00000460573 CDAN1Q8IWY9 1227 aa26.94■■□□□ 1.9
C9orf3-209ENST00000460573 SEC62Q99442 399 aaKnown RBP26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms