RNA–Protein interactions for RNA: ENST00000460430.5

CDHR4-203, Transcript of cadherin related family member 4, humanhuman

TSL 3

Gene CDHR4, Length 665 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-203ENST00000460430 POLR3DP05423 398 aaPredicted RBP12.75□□□□□ -0.37
CDHR4-203ENST00000460430 TCP10Q12799 353 aa12.75□□□□□ -0.37
CDHR4-203ENST00000460430 NFIAQ12857 509 aa12.75□□□□□ -0.37
CDHR4-203ENST00000460430 IMMTQ16891 758 aaKnown RBP12.75□□□□□ -0.37
CDHR4-203ENST00000460430 SLC4A8Q2Y0W8 1093 aa12.75□□□□□ -0.37
CDHR4-203ENST00000460430 ANGEL2Q5VTE6 544 aaKnown RBP12.75□□□□□ -0.37
CDHR4-203ENST00000460430 RNF20Q5VTR2 975 aa12.75□□□□□ -0.37
CDHR4-203ENST00000460430 FOCADQ5VW36 1801 aa12.75□□□□□ -0.37
CDHR4-203ENST00000460430 APOBEC3FQ8IUX4 373 aaKnown RBP12.75□□□□□ -0.37
CDHR4-203ENST00000460430 MAP4K1Q92918 833 aa12.75□□□□□ -0.37
CDHR4-203ENST00000460430 IDI2Q9BXS1 227 aa12.75□□□□□ -0.37
CDHR4-203ENST00000460430 OSBPL5Q9H0X9 879 aaPredicted RBP12.75□□□□□ -0.37
CDHR4-203ENST00000460430 TAF1DQ9H5J8 278 aaPredicted RBP12.75□□□□□ -0.37
CDHR4-203ENST00000460430 SAP30BPQ9UHR5 308 aaKnown RBP12.75□□□□□ -0.37
CDHR4-203ENST00000460430 LAMB1P07942 1786 aa12.74□□□□□ -0.37
CDHR4-203ENST00000460430 DDX60LQ5H9U9 1706 aaKnown RBP12.74□□□□□ -0.37
CDHR4-203ENST00000460430 ENTPD3O75355 529 aa12.74□□□□□ -0.37
CDHR4-203ENST00000460430 FGAP02671 866 aa12.74□□□□□ -0.37
CDHR4-203ENST00000460430 HLA-DOAP06340 250 aa12.74□□□□□ -0.37
CDHR4-203ENST00000460430 VEGFAP15692 232 aaPredicted RBP12.74□□□□□ -0.37
CDHR4-203ENST00000460430 ALX1Q15699 326 aa12.74□□□□□ -0.37
CDHR4-203ENST00000460430 PNMA8AQ86V59 439 aaPredicted RBP12.74□□□□□ -0.37
CDHR4-203ENST00000460430 ZSCAN29Q8IWY8 852 aaPredicted RBP12.74□□□□□ -0.37
CDHR4-203ENST00000460430 USP26Q9BXU7 913 aa12.74□□□□□ -0.37
CDHR4-203ENST00000460430 DDX4Q9NQI0 724 aaKnown RBP12.74□□□□□ -0.37
CDHR4-203ENST00000460430 CDK5RAP2Q96SN8 1893 aa12.74□□□□□ -0.37
CDHR4-203ENST00000460430 ASTN2O75129 1339 aaPredicted RBP12.73□□□□□ -0.37
CDHR4-203ENST00000460430 PITPNM2Q9BZ72 1349 aa12.73□□□□□ -0.37
CDHR4-203ENST00000460430 MINDY4BA8MYZ0 360 aa12.73□□□□□ -0.37
CDHR4-203ENST00000460430 ZNF213O14771 459 aa12.73□□□□□ -0.37
CDHR4-203ENST00000460430 NPM3O75607 178 aaKnown RBP12.73□□□□□ -0.37
CDHR4-203ENST00000460430 SLC3A2P08195 630 aaKnown RBP12.73□□□□□ -0.37
CDHR4-203ENST00000460430 ZKSCAN1P17029 563 aaPredicted RBP12.73□□□□□ -0.37
CDHR4-203ENST00000460430 HAND2P61296 217 aa12.73□□□□□ -0.37
CDHR4-203ENST00000460430 FKBP1CQ5VVH2 108 aa12.73□□□□□ -0.37
CDHR4-203ENST00000460430 DCPSQ96C86 337 aaKnown RBP12.73□□□□□ -0.37
CDHR4-203ENST00000460430 TRIM34Q9BYJ4 488 aa12.73□□□□□ -0.37
CDHR4-203ENST00000460430 C22orf23Q9BZE7 217 aa12.73□□□□□ -0.37
CDHR4-203ENST00000460430 RRAGCQ9HB90 399 aa12.73□□□□□ -0.37
CDHR4-203ENST00000460430 FAM198AQ9UFP1 575 aa12.73□□□□□ -0.37
CDHR4-203ENST00000460430 COL2A1P02458 1487 aaPredicted RBP12.72□□□□□ -0.37
CDHR4-203ENST00000460430 LAMA4Q16363 1823 aa12.72□□□□□ -0.37
CDHR4-203ENST00000460430 USP17L12C9JPN9 530 aa12.72□□□□□ -0.37
CDHR4-203ENST00000460430 USP17L21D6R901 530 aa12.72□□□□□ -0.37
CDHR4-203ENST00000460430 HSPA4P34932 840 aa12.72□□□□□ -0.37
CDHR4-203ENST00000460430 HIRAP54198 1017 aaPredicted RBP12.72□□□□□ -0.37
CDHR4-203ENST00000460430 PPARAQ07869 468 aa12.72□□□□□ -0.37
CDHR4-203ENST00000460430 CREB3L3Q68CJ9 461 aa12.72□□□□□ -0.37
CDHR4-203ENST00000460430 CTR9Q6PD62 1173 aa12.72□□□□□ -0.37
CDHR4-203ENST00000460430 FAM83AQ86UY5 434 aa12.72□□□□□ -0.37
CDHR4-203ENST00000460430 SULF1Q8IWU6 871 aa12.72□□□□□ -0.37
CDHR4-203ENST00000460430 DHX36Q9H2U1 1008 aaKnown RBP12.72□□□□□ -0.37
CDHR4-203ENST00000460430 NMRK2Q9NPI5 230 aa12.72□□□□□ -0.37
CDHR4-203ENST00000460430 PALD1Q9ULE6 856 aa12.72□□□□□ -0.37
CDHR4-203ENST00000460430 CLEC11AQ9Y240 323 aa12.72□□□□□ -0.37
CDHR4-203ENST00000460430 CNTNAP1P78357 1384 aa12.71□□□□□ -0.37
CDHR4-203ENST00000460430 BAZ2AQ9UIF9 1905 aaKnown RBP12.71□□□□□ -0.37
CDHR4-203ENST00000460430 CYP2D7A0A087X1C5 515 aa12.71□□□□□ -0.37
CDHR4-203ENST00000460430 POTECB2RU33 542 aa12.71□□□□□ -0.37
CDHR4-203ENST00000460430 SLC27A2O14975 620 aa12.71□□□□□ -0.37
CDHR4-203ENST00000460430 CYP2D6P10635 497 aa12.71□□□□□ -0.37
CDHR4-203ENST00000460430 RASA3Q14644 834 aa12.71□□□□□ -0.37
CDHR4-203ENST00000460430 SBK1Q52WX2 424 aa12.71□□□□□ -0.37
CDHR4-203ENST00000460430 TTC6Q86TZ1 520 aa12.71□□□□□ -0.37
CDHR4-203ENST00000460430 CRACR2BQ8N4Y2 399 aaPredicted RBP12.71□□□□□ -0.37
CDHR4-203ENST00000460430 ZC3H15Q8WU90 426 aaKnown RBP12.71□□□□□ -0.37
CDHR4-203ENST00000460430 FAM151AQ8WW52 585 aa12.71□□□□□ -0.37
CDHR4-203ENST00000460430 CSRNP1Q96S65 589 aa12.71□□□□□ -0.37
CDHR4-203ENST00000460430 TMEM39BQ9GZU3 492 aa12.71□□□□□ -0.37
CDHR4-203ENST00000460430 GPBP1L1Q9HC44 474 aaPredicted RBP12.71□□□□□ -0.37
CDHR4-203ENST00000460430 MKRN1Q9UHC7 482 aaKnown RBP12.71□□□□□ -0.37
CDHR4-203ENST00000460430 SCAF8Q9UPN6 1271 aaKnown RBP12.71□□□□□ -0.37
CDHR4-203ENST00000460430 ATRNL1Q5VV63 1379 aa12.7□□□□□ -0.38
CDHR4-203ENST00000460430 CYP21A2P08686 494 aa12.7□□□□□ -0.38
CDHR4-203ENST00000460430 CTDSPL2Q05D32 466 aa12.7□□□□□ -0.38
CDHR4-203ENST00000460430 NECTIN1Q15223 517 aa12.7□□□□□ -0.38
CDHR4-203ENST00000460430 C12orf60Q5U649 245 aa12.7□□□□□ -0.38
CDHR4-203ENST00000460430 STK11IPQ8N1F8 1099 aa12.7□□□□□ -0.38
CDHR4-203ENST00000460430 DEFB129Q9H1M3 183 aa12.7□□□□□ -0.38
CDHR4-203ENST00000460430 RNF41Q9H4P4 317 aaPredicted RBP12.7□□□□□ -0.38
CDHR4-203ENST00000460430 TOMM22Q9NS69 142 aa12.7□□□□□ -0.38
CDHR4-203ENST00000460430 PPP2R3BQ9Y5P8 575 aa12.7□□□□□ -0.38
CDHR4-203ENST00000460430 MYH1P12882 1939 aa12.7□□□□□ -0.38
CDHR4-203ENST00000460430 ROBO3Q96MS0 1386 aa12.69□□□□□ -0.38
CDHR4-203ENST00000460430 DDTLA6NHG4 134 aaPredicted RBP12.69□□□□□ -0.38
CDHR4-203ENST00000460430 PDE4BQ07343 736 aa12.69□□□□□ -0.38
CDHR4-203ENST00000460430 TRDNQ13061 729 aa12.69□□□□□ -0.38
CDHR4-203ENST00000460430 KRT32Q14532 448 aa12.69□□□□□ -0.38
CDHR4-203ENST00000460430 MFSD6Q6ZSS7 791 aa12.69□□□□□ -0.38
CDHR4-203ENST00000460430 KRT26Q7Z3Y9 468 aa12.69□□□□□ -0.38
CDHR4-203ENST00000460430 RALYLQ86SE5 291 aaKnown RBP12.69□□□□□ -0.38
CDHR4-203ENST00000460430 LDHDQ86WU2 507 aa12.69□□□□□ -0.38
CDHR4-203ENST00000460430 TBC1D10CQ8IV04 446 aa12.69□□□□□ -0.38
CDHR4-203ENST00000460430 ZFPM1Q8IX07 1006 aa12.69□□□□□ -0.38
CDHR4-203ENST00000460430 TBC1D32Q96NH3 1257 aa12.69□□□□□ -0.38
CDHR4-203ENST00000460430 ZNF287Q9HBT7 754 aa12.69□□□□□ -0.38
CDHR4-203ENST00000460430 PI4KBQ9UBF8 816 aa12.69□□□□□ -0.38
CDHR4-203ENST00000460430 SERPINB13Q9UIV8 391 aa12.69□□□□□ -0.38
CDHR4-203ENST00000460430 ADM5C9JUS6 153 aa12.68□□□□□ -0.38
CDHR4-203ENST00000460430 RBM25P49756 843 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms