RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 PDE8BO95263 885 aa8.79□□□□□ -1
HDAC9-218ENST00000456174 TBC1D8O95759 1140 aa8.79□□□□□ -1
HDAC9-218ENST00000456174 ERCC3P19447 782 aa8.79□□□□□ -1
HDAC9-218ENST00000456174 LMAN1P49257 510 aa8.79□□□□□ -1
HDAC9-218ENST00000456174 ZNF75DP51815 510 aa8.79□□□□□ -1
HDAC9-218ENST00000456174 SMC1AQ14683 1233 aaKnown RBP8.79□□□□□ -1
HDAC9-218ENST00000456174 ERFEQ4G0M1 354 aa8.79□□□□□ -1
HDAC9-218ENST00000456174 TBC1D9BQ66K14 1250 aa8.79□□□□□ -1
HDAC9-218ENST00000456174 FAM196AQ6ZSG2 479 aa8.79□□□□□ -1
HDAC9-218ENST00000456174 TADA2BQ86TJ2 420 aa8.79□□□□□ -1
HDAC9-218ENST00000456174 RASEFQ8IZ41 740 aa8.79□□□□□ -1
HDAC9-218ENST00000456174 CACTINQ8WUQ7 758 aaKnown RBP8.79□□□□□ -1
HDAC9-218ENST00000456174 ORC3Q9UBD5 711 aaPredicted RBP8.79□□□□□ -1
HDAC9-218ENST00000456174 ADAM21Q9UKJ8 722 aa8.79□□□□□ -1
HDAC9-218ENST00000456174 TAF1P21675 1872 aa8.79□□□□□ -1
HDAC9-218ENST00000456174 RTL9Q8NET4 1388 aa8.79□□□□□ -1
HDAC9-218ENST00000456174 H0YHG0 523 aa8.79□□□□□ -1
HDAC9-218ENST00000456174 USP8P40818 1118 aa8.79□□□□□ -1
HDAC9-218ENST00000456174 SARNPP82979 210 aaKnown RBP8.79□□□□□ -1
HDAC9-218ENST00000456174 NECTIN1Q15223 517 aa8.79□□□□□ -1
HDAC9-218ENST00000456174 ARHGAP29Q52LW3 1261 aa8.79□□□□□ -1
HDAC9-218ENST00000456174 PRPF40BQ6NWY9 871 aaKnown RBP8.79□□□□□ -1
HDAC9-218ENST00000456174 KRT27Q7Z3Y8 459 aa8.79□□□□□ -1
HDAC9-218ENST00000456174 ZNF589Q86UQ0 364 aaPredicted RBP8.79□□□□□ -1
HDAC9-218ENST00000456174 ARHGEF1Q92888 912 aaKnown RBP8.79□□□□□ -1
HDAC9-218ENST00000456174 MAP4K1Q92918 833 aa8.79□□□□□ -1
HDAC9-218ENST00000456174 RNF25Q96BH1 459 aaPredicted RBP8.79□□□□□ -1
HDAC9-218ENST00000456174 MPHOSPH8Q99549 860 aa8.79□□□□□ -1
HDAC9-218ENST00000456174 UPF3BQ9BZI7 483 aaKnown RBP8.79□□□□□ -1
HDAC9-218ENST00000456174 RBM8AQ9Y5S9 174 aaKnown RBP8.79□□□□□ -1
HDAC9-218ENST00000456174 ABCC12Q96J65 1359 aa8.78□□□□□ -1
HDAC9-218ENST00000456174 TUBB4AP04350 444 aa8.78□□□□□ -1
HDAC9-218ENST00000456174 CHGBP05060 677 aa8.78□□□□□ -1
HDAC9-218ENST00000456174 CCDC192P0DO97 292 aa8.78□□□□□ -1
HDAC9-218ENST00000456174 FKBP4Q02790 459 aaKnown RBP eCLIP8.78□□□□□ -1
HDAC9-218ENST00000456174 ZC3H12AQ5D1E8 599 aaKnown RBP8.78□□□□□ -1
HDAC9-218ENST00000456174 AMIGO3Q86WK7 504 aa8.78□□□□□ -1
HDAC9-218ENST00000456174 HELBQ8NG08 1087 aaPredicted RBP8.78□□□□□ -1
HDAC9-218ENST00000456174 MIEF2Q96C03 454 aa8.78□□□□□ -1
HDAC9-218ENST00000456174 SETDB2Q96T68 719 aa8.78□□□□□ -1
HDAC9-218ENST00000456174 UBR3Q6ZT12 1888 aa8.78□□□□□ -1
HDAC9-218ENST00000456174 WDR33Q9C0J8 1336 aaKnown RBP8.78□□□□□ -1
HDAC9-218ENST00000456174 MYO5AQ9Y4I1 1855 aaKnown RBP8.77□□□□□ -1
HDAC9-218ENST00000456174 CTAGE5O15320 804 aa8.77□□□□□ -1
HDAC9-218ENST00000456174 TAF5LO75529 589 aa8.77□□□□□ -1
HDAC9-218ENST00000456174 SASH3O75995 380 aa8.77□□□□□ -1
HDAC9-218ENST00000456174 IGHMBP2P38935 993 aaKnown RBP8.77□□□□□ -1
HDAC9-218ENST00000456174 MCMDC2Q4G0Z9 681 aa8.77□□□□□ -1
HDAC9-218ENST00000456174 FOXD4L5Q5VV16 416 aaPredicted RBP8.77□□□□□ -1
HDAC9-218ENST00000456174 FOXD4L4Q8WXT5 416 aaPredicted RBP8.77□□□□□ -1
HDAC9-218ENST00000456174 KCNB2Q92953 911 aa8.77□□□□□ -1
HDAC9-218ENST00000456174 TMX3Q96JJ7 454 aa8.77□□□□□ -1
HDAC9-218ENST00000456174 SEC62Q99442 399 aaKnown RBP8.77□□□□□ -1
HDAC9-218ENST00000456174 ZCCHC17Q9NP64 241 aaKnown RBP8.77□□□□□ -1
HDAC9-218ENST00000456174 LRRC4BQ9NT99 713 aa8.77□□□□□ -1
HDAC9-218ENST00000456174 NRBP1Q9UHY1 535 aa8.77□□□□□ -1
HDAC9-218ENST00000456174 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.77□□□□□ -1
HDAC9-218ENST00000456174 USP27XA6NNY8 438 aa8.77□□□□□ -1.01
HDAC9-218ENST00000456174 ZKSCAN1P17029 563 aaPredicted RBP8.77□□□□□ -1.01
HDAC9-218ENST00000456174 CASTP20810 708 aaKnown RBP8.77□□□□□ -1.01
HDAC9-218ENST00000456174 RFC4P35249 363 aa8.77□□□□□ -1.01
HDAC9-218ENST00000456174 SCARF1Q14162 830 aa8.77□□□□□ -1.01
HDAC9-218ENST00000456174 PUM3Q15397 648 aaKnown RBP8.77□□□□□ -1.01
HDAC9-218ENST00000456174 TRAPPC3LQ5T215 181 aa8.77□□□□□ -1.01
HDAC9-218ENST00000456174 CREB3L3Q68CJ9 461 aa8.77□□□□□ -1.01
HDAC9-218ENST00000456174 CCAR2Q8N163 923 aaKnown RBP8.77□□□□□ -1.01
HDAC9-218ENST00000456174 LPIN2Q92539 896 aa8.77□□□□□ -1.01
HDAC9-218ENST00000456174 NYXQ9GZU5 481 aa8.77□□□□□ -1.01
HDAC9-218ENST00000456174 FAM107BQ9H098 131 aa8.77□□□□□ -1.01
HDAC9-218ENST00000456174 A0A1B0GUL6 1792 aa8.77□□□□□ -1.01
HDAC9-218ENST00000456174 COL4A1P02462 1669 aa8.77□□□□□ -1.01
HDAC9-218ENST00000456174 MPHOSPH10O00566 681 aaKnown RBP8.76□□□□□ -1.01
HDAC9-218ENST00000456174 RNF113AO15541 343 aaKnown RBP8.76□□□□□ -1.01
HDAC9-218ENST00000456174 TRIM37O94972 964 aa8.76□□□□□ -1.01
HDAC9-218ENST00000456174 FGFR2P21802 821 aa8.76□□□□□ -1.01
HDAC9-218ENST00000456174 SCP2P22307 547 aa8.76□□□□□ -1.01
HDAC9-218ENST00000456174 ZAP70P43403 619 aa8.76□□□□□ -1.01
HDAC9-218ENST00000456174 SF3B3Q15393 1217 aaKnown RBP8.76□□□□□ -1.01
HDAC9-218ENST00000456174 SLC10A5Q5PT55 438 aa8.76□□□□□ -1.01
HDAC9-218ENST00000456174 GIMAP6Q6P9H5 292 aa8.76□□□□□ -1.01
HDAC9-218ENST00000456174 CCDC129Q6ZRS4 1044 aa8.76□□□□□ -1.01
HDAC9-218ENST00000456174 C3orf67Q6ZVT6 689 aa8.76□□□□□ -1.01
HDAC9-218ENST00000456174 NOL8Q76FK4 1167 aaKnown RBP8.76□□□□□ -1.01
HDAC9-218ENST00000456174 TDRD7Q8NHU6 1098 aaKnown RBP8.76□□□□□ -1.01
HDAC9-218ENST00000456174 ZNF512BQ96KM6 892 aaPredicted RBP8.76□□□□□ -1.01
HDAC9-218ENST00000456174 CDC5LQ99459 802 aaKnown RBP8.76□□□□□ -1.01
HDAC9-218ENST00000456174 HELLSQ9NRZ9 838 aa8.76□□□□□ -1.01
HDAC9-218ENST00000456174 PDRG1Q9NUG6 133 aa8.76□□□□□ -1.01
HDAC9-218ENST00000456174 GNL3LQ9NVN8 582 aaKnown RBP8.76□□□□□ -1.01
HDAC9-218ENST00000456174 SLC27A2O14975 620 aa8.76□□□□□ -1.01
HDAC9-218ENST00000456174 MCAMP43121 646 aa8.76□□□□□ -1.01
HDAC9-218ENST00000456174 LRRFIP1Q32MZ4 808 aaKnown RBP8.76□□□□□ -1.01
HDAC9-218ENST00000456174 ADCK5Q3MIX3 580 aa8.76□□□□□ -1.01
HDAC9-218ENST00000456174 ZMYM1Q5SVZ6 1142 aa8.76□□□□□ -1.01
HDAC9-218ENST00000456174 JAKMIP3Q5VZ66 844 aa8.76□□□□□ -1.01
HDAC9-218ENST00000456174 ZNF772Q68DY9 489 aaPredicted RBP8.76□□□□□ -1.01
HDAC9-218ENST00000456174 CC2D1AQ6P1N0 951 aaPredicted RBP8.76□□□□□ -1.01
HDAC9-218ENST00000456174 LRRC8AQ8IWT6 810 aa8.76□□□□□ -1.01
HDAC9-218ENST00000456174 MSL3Q8N5Y2 521 aaKnown RBP8.76□□□□□ -1.01
HDAC9-218ENST00000456174 JAKMIP1Q96N16 626 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms