RNA–Protein interactions for RNA: ENST00000454850.1

CLCN4-204, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 3

Gene CLCN4, Length 487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-204ENST00000454850 PAWRQ96IZ0 340 aaKnown RBP12.42□□□□□ -0.42
CLCN4-204ENST00000454850 PICK1Q9NRD5 415 aa12.42□□□□□ -0.42
CLCN4-204ENST00000454850 USP40Q9NVE5 1235 aa12.42□□□□□ -0.42
CLCN4-204ENST00000454850 FAM198AQ9UFP1 575 aa12.42□□□□□ -0.42
CLCN4-204ENST00000454850 ZHX2Q9Y6X8 837 aa12.42□□□□□ -0.42
CLCN4-204ENST00000454850 A0A0G2JLL6 359 aaPredicted RBP12.41□□□□□ -0.42
CLCN4-204ENST00000454850 SLC5A1P13866 664 aa12.41□□□□□ -0.42
CLCN4-204ENST00000454850 PRDX5P30044 214 aa12.41□□□□□ -0.42
CLCN4-204ENST00000454850 FASTKD5Q7L8L6 764 aaKnown RBP12.41□□□□□ -0.42
CLCN4-204ENST00000454850 PRRT2Q7Z6L0 340 aaPredicted RBP12.41□□□□□ -0.42
CLCN4-204ENST00000454850 C7orf61Q8IZ16 206 aa12.41□□□□□ -0.42
CLCN4-204ENST00000454850 SMCR8Q8TEV9 937 aaPredicted RBP12.41□□□□□ -0.42
CLCN4-204ENST00000454850 DIS3LQ8TF46 1054 aaKnown RBP12.41□□□□□ -0.42
CLCN4-204ENST00000454850 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.41□□□□□ -0.42
CLCN4-204ENST00000454850 ZMYND8Q9ULU4 1186 aaPredicted RBP12.41□□□□□ -0.42
CLCN4-204ENST00000454850 LOC285556D6RIA3 1793 aa12.41□□□□□ -0.42
CLCN4-204ENST00000454850 UTYO14607 1347 aa12.4□□□□□ -0.42
CLCN4-204ENST00000454850 KIF16BQ96L93 1317 aa12.4□□□□□ -0.42
CLCN4-204ENST00000454850 LDHBP07195 334 aaKnown RBP12.4□□□□□ -0.42
CLCN4-204ENST00000454850 FGFR2P21802 821 aa12.4□□□□□ -0.42
CLCN4-204ENST00000454850 ZSCAN29Q8IWY8 852 aaPredicted RBP12.4□□□□□ -0.42
CLCN4-204ENST00000454850 SCYL3Q8IZE3 742 aa12.4□□□□□ -0.42
CLCN4-204ENST00000454850 PLXNB2O15031 1838 aa12.39□□□□□ -0.43
CLCN4-204ENST00000454850 TRIM75PA6NK02 468 aa12.39□□□□□ -0.43
CLCN4-204ENST00000454850 SLURP2P0DP57 97 aa12.39□□□□□ -0.43
CLCN4-204ENST00000454850 PTPRAP18433 802 aa12.39□□□□□ -0.43
CLCN4-204ENST00000454850 RGS3P49796 1198 aa12.39□□□□□ -0.43
CLCN4-204ENST00000454850 Q7L0L9 218 aa12.39□□□□□ -0.43
CLCN4-204ENST00000454850 NECAB2Q7Z6G3 386 aa12.39□□□□□ -0.43
CLCN4-204ENST00000454850 CCDC84Q86UT8 332 aaPredicted RBP12.39□□□□□ -0.43
CLCN4-204ENST00000454850 DEFB123Q8N688 67 aa12.39□□□□□ -0.43
CLCN4-204ENST00000454850 ANKRD13CQ8N6S4 541 aa12.39□□□□□ -0.43
CLCN4-204ENST00000454850 PXYLP1Q8TE99 480 aa12.39□□□□□ -0.43
CLCN4-204ENST00000454850 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.39□□□□□ -0.43
CLCN4-204ENST00000454850 PAK6Q9NQU5 681 aaPredicted RBP12.39□□□□□ -0.43
CLCN4-204ENST00000454850 AFG3L2Q9Y4W6 797 aa12.39□□□□□ -0.43
CLCN4-204ENST00000454850 LRRFIP2Q9Y608 721 aaKnown RBP12.39□□□□□ -0.43
CLCN4-204ENST00000454850 ATRNL1Q5VV63 1379 aa12.39□□□□□ -0.43
CLCN4-204ENST00000454850 PHF20L1A8MW92 1017 aa12.38□□□□□ -0.43
CLCN4-204ENST00000454850 IRF5Q13568 498 aa12.38□□□□□ -0.43
CLCN4-204ENST00000454850 NCBP3Q53F19 620 aaKnown RBP12.38□□□□□ -0.43
CLCN4-204ENST00000454850 LPIN2Q92539 896 aa12.38□□□□□ -0.43
CLCN4-204ENST00000454850 COA7Q96BR5 231 aa12.38□□□□□ -0.43
CLCN4-204ENST00000454850 CRISPLD2Q9H0B8 497 aa12.38□□□□□ -0.43
CLCN4-204ENST00000454850 MRS2Q9HD23 443 aa12.38□□□□□ -0.43
CLCN4-204ENST00000454850 EYA2O00167 538 aa12.37□□□□□ -0.43
CLCN4-204ENST00000454850 SYN1P17600 705 aa12.37□□□□□ -0.43
CLCN4-204ENST00000454850 PICALMQ13492 652 aa12.37□□□□□ -0.43
CLCN4-204ENST00000454850 ATP2B3Q16720 1220 aa12.37□□□□□ -0.43
CLCN4-204ENST00000454850 TREML2Q5T2D2 321 aa12.37□□□□□ -0.43
CLCN4-204ENST00000454850 SH3BP5LQ7L8J4 393 aa12.37□□□□□ -0.43
CLCN4-204ENST00000454850 GDF15Q99988 308 aa12.37□□□□□ -0.43
CLCN4-204ENST00000454850 SIL1Q9H173 461 aa12.37□□□□□ -0.43
CLCN4-204ENST00000454850 SLC45A1Q9Y2W3 748 aa12.37□□□□□ -0.43
CLCN4-204ENST00000454850 EYSQ5T1H1 3165 aa12.36□□□□□ -0.43
CLCN4-204ENST00000454850 DDTLA6NHG4 134 aaPredicted RBP12.36□□□□□ -0.43
CLCN4-204ENST00000454850 MNX1P50219 401 aaPredicted RBP12.36□□□□□ -0.43
CLCN4-204ENST00000454850 GNL3LQ9NVN8 582 aaKnown RBP12.36□□□□□ -0.43
CLCN4-204ENST00000454850 AGTPBP1Q9UPW5 1226 aa12.36□□□□□ -0.43
CLCN4-204ENST00000454850 FRMPD3Q5JV73 1810 aa12.36□□□□□ -0.43
CLCN4-204ENST00000454850 RFX7Q2KHR2 1363 aa12.35□□□□□ -0.43
CLCN4-204ENST00000454850 FAM196BA6NMK8 535 aa12.35□□□□□ -0.43
CLCN4-204ENST00000454850 ENTPD3O75355 529 aa12.35□□□□□ -0.43
CLCN4-204ENST00000454850 HMGCRP04035 888 aa12.35□□□□□ -0.43
CLCN4-204ENST00000454850 MAGEA10P43363 369 aaPredicted RBP12.35□□□□□ -0.43
CLCN4-204ENST00000454850 PHKA1P46020 1223 aa12.35□□□□□ -0.43
CLCN4-204ENST00000454850 RFX5P48382 616 aaPredicted RBP12.35□□□□□ -0.43
CLCN4-204ENST00000454850 TRIM32Q13049 653 aa12.35□□□□□ -0.43
CLCN4-204ENST00000454850 FAM110CQ1W6H9 321 aa12.35□□□□□ -0.43
CLCN4-204ENST00000454850 ATG9AQ7Z3C6 839 aa12.35□□□□□ -0.43
CLCN4-204ENST00000454850 DZIP1Q86YF9 867 aaKnown RBP12.35□□□□□ -0.43
CLCN4-204ENST00000454850 IDI2Q9BXS1 227 aa12.35□□□□□ -0.43
CLCN4-204ENST00000454850 DDX4Q9NQI0 724 aaKnown RBP12.35□□□□□ -0.43
CLCN4-204ENST00000454850 PNMA3Q9UL41 463 aa12.35□□□□□ -0.43
CLCN4-204ENST00000454850 VCANP13611 3396 aa12.34□□□□□ -0.43
CLCN4-204ENST00000454850 CTNND1O60716 968 aaKnown RBP12.34□□□□□ -0.43
CLCN4-204ENST00000454850 CAPN2P17655 700 aa12.34□□□□□ -0.43
CLCN4-204ENST00000454850 BMP8BP34820 402 aa12.34□□□□□ -0.43
CLCN4-204ENST00000454850 BTDP43251 543 aa12.34□□□□□ -0.43
CLCN4-204ENST00000454850 NBPF3Q9H094 633 aa12.34□□□□□ -0.43
CLCN4-204ENST00000454850 USP44Q9H0E7 712 aa12.34□□□□□ -0.43
CLCN4-204ENST00000454850 ABCF2Q9UG63 623 aa12.34□□□□□ -0.43
CLCN4-204ENST00000454850 DENND2AQ9ULE3 1009 aa12.34□□□□□ -0.43
CLCN4-204ENST00000454850 PRUNE2Q8WUY3 3088 aa12.34□□□□□ -0.43
CLCN4-204ENST00000454850 SALL1Q9NSC2 1324 aa12.34□□□□□ -0.43
CLCN4-204ENST00000454850 ADORA1P30542 326 aa12.33□□□□□ -0.44
CLCN4-204ENST00000454850 MRPL50Q8N5N7 158 aaKnown RBP12.33□□□□□ -0.44
CLCN4-204ENST00000454850 ANKLE1Q8NAG6 615 aa12.33□□□□□ -0.44
CLCN4-204ENST00000454850 UBE2OQ9C0C9 1292 aaKnown RBP12.33□□□□□ -0.44
CLCN4-204ENST00000454850 C11orf49Q9H6J7 331 aa12.33□□□□□ -0.44
CLCN4-204ENST00000454850 HMX1Q9NP08 348 aaPredicted RBP12.33□□□□□ -0.44
CLCN4-204ENST00000454850 CEP126Q9P2H0 1117 aa12.33□□□□□ -0.44
CLCN4-204ENST00000454850 CDK5RAP2Q96SN8 1893 aa12.33□□□□□ -0.44
CLCN4-204ENST00000454850 GAKO14976 1311 aa12.33□□□□□ -0.44
CLCN4-204ENST00000454850 HMGCS2P54868 508 aa12.32□□□□□ -0.44
CLCN4-204ENST00000454850 SPP2Q13103 211 aa12.32□□□□□ -0.44
CLCN4-204ENST00000454850 GPR153Q6NV75 609 aa12.32□□□□□ -0.44
CLCN4-204ENST00000454850 TDHQ8IZJ6 230 aa12.32□□□□□ -0.44
CLCN4-204ENST00000454850 ZGPATQ8N5A5 531 aaKnown RBP12.32□□□□□ -0.44
CLCN4-204ENST00000454850 PROCA1Q8NCQ7 364 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 587.8 ms