RNA–Protein interactions for RNA: ENST00000454635.6

LINC00963-207, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 910 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-207ENST00000454635 ZCCHC17Q9NP64 241 aaKnown RBP12.93□□□□□ -0.34
LINC00963-207ENST00000454635 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.93□□□□□ -0.34
LINC00963-207ENST00000454635 ATRNL1Q5VV63 1379 aa12.93□□□□□ -0.34
LINC00963-207ENST00000454635 SIPA1L1O43166 1804 aa12.92□□□□□ -0.34
LINC00963-207ENST00000454635 LOC285556D6RIA3 1793 aa12.92□□□□□ -0.34
LINC00963-207ENST00000454635 RBBP6Q7Z6E9 1792 aaKnown RBP12.92□□□□□ -0.34
LINC00963-207ENST00000454635 IFIT2P09913 472 aaKnown RBP12.92□□□□□ -0.34
LINC00963-207ENST00000454635 CETPP11597 493 aa12.92□□□□□ -0.34
LINC00963-207ENST00000454635 PPATQ06203 517 aa12.92□□□□□ -0.34
LINC00963-207ENST00000454635 PPIL2Q13356 520 aa12.92□□□□□ -0.34
LINC00963-207ENST00000454635 SNAPC2Q13487 334 aa12.92□□□□□ -0.34
LINC00963-207ENST00000454635 ARHGEF6Q15052 776 aa12.92□□□□□ -0.34
LINC00963-207ENST00000454635 CTU1Q7Z7A3 348 aaKnown RBP12.92□□□□□ -0.34
LINC00963-207ENST00000454635 RHPN1Q8TCX5 695 aa12.92□□□□□ -0.34
LINC00963-207ENST00000454635 OTUD5Q96G74 571 aa12.92□□□□□ -0.34
LINC00963-207ENST00000454635 ABHD8Q96I13 439 aa12.92□□□□□ -0.34
LINC00963-207ENST00000454635 FAM198AQ9UFP1 575 aa12.92□□□□□ -0.34
LINC00963-207ENST00000454635 DBNLQ9UJU6 430 aaKnown RBP12.92□□□□□ -0.34
LINC00963-207ENST00000454635 TESPA1A2RU30 521 aaPredicted RBP12.91□□□□□ -0.34
LINC00963-207ENST00000454635 GPR25O00155 361 aa12.91□□□□□ -0.34
LINC00963-207ENST00000454635 FKTNO75072 461 aa12.91□□□□□ -0.34
LINC00963-207ENST00000454635 CAPN15O75808 1086 aa12.91□□□□□ -0.34
LINC00963-207ENST00000454635 MAP3K12Q12852 859 aa12.91□□□□□ -0.34
LINC00963-207ENST00000454635 NFIAQ12857 509 aa12.91□□□□□ -0.34
LINC00963-207ENST00000454635 PICALMQ13492 652 aa12.91□□□□□ -0.34
LINC00963-207ENST00000454635 NOL9Q5SY16 702 aaKnown RBP12.91□□□□□ -0.34
LINC00963-207ENST00000454635 PI16Q6UXB8 463 aa12.91□□□□□ -0.34
LINC00963-207ENST00000454635 CDAN1Q8IWY9 1227 aa12.91□□□□□ -0.34
LINC00963-207ENST00000454635 EAF2Q96CJ1 260 aaPredicted RBP12.91□□□□□ -0.34
LINC00963-207ENST00000454635 PICK1Q9NRD5 415 aa12.91□□□□□ -0.34
LINC00963-207ENST00000454635 SNCAIPQ9Y6H5 919 aa12.91□□□□□ -0.34
LINC00963-207ENST00000454635 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.91□□□□□ -0.34
LINC00963-207ENST00000454635 DDX60LQ5H9U9 1706 aaKnown RBP12.91□□□□□ -0.34
LINC00963-207ENST00000454635 CCL15-CCL14A0A0B4J2E2 113 aa12.9□□□□□ -0.34
LINC00963-207ENST00000454635 TBC1D8O95759 1140 aa12.9□□□□□ -0.34
LINC00963-207ENST00000454635 CCL15Q16663 113 aa12.9□□□□□ -0.34
LINC00963-207ENST00000454635 TBC1D9Q6ZT07 1266 aa12.9□□□□□ -0.34
LINC00963-207ENST00000454635 MIGA2Q7L4E1 593 aa12.9□□□□□ -0.34
LINC00963-207ENST00000454635 TEX11Q8IYF3 940 aa12.9□□□□□ -0.34
LINC00963-207ENST00000454635 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.9□□□□□ -0.34
LINC00963-207ENST00000454635 TBC1D2Q9BYX2 928 aa12.9□□□□□ -0.34
LINC00963-207ENST00000454635 MCOLN1Q9GZU1 580 aa12.9□□□□□ -0.34
LINC00963-207ENST00000454635 CCDC8Q9H0W5 538 aaPredicted RBP12.9□□□□□ -0.34
LINC00963-207ENST00000454635 DHX36Q9H2U1 1008 aaKnown RBP12.9□□□□□ -0.34
LINC00963-207ENST00000454635 HERC5Q9UII4 1024 aaKnown RBP12.9□□□□□ -0.34
LINC00963-207ENST00000454635 ZNF112Q9UJU3 913 aa12.9□□□□□ -0.34
LINC00963-207ENST00000454635 BAZ2AQ9UIF9 1905 aaKnown RBP12.9□□□□□ -0.35
LINC00963-207ENST00000454635 TBC1D12O60347 775 aa12.89□□□□□ -0.35
LINC00963-207ENST00000454635 IDH1O75874 414 aaKnown RBP12.89□□□□□ -0.35
LINC00963-207ENST00000454635 CYP2E1P05181 493 aaPredicted RBP12.89□□□□□ -0.35
LINC00963-207ENST00000454635 ZNF296Q8WUU4 475 aaPredicted RBP12.89□□□□□ -0.35
LINC00963-207ENST00000454635 ZKSCAN4Q969J2 545 aaPredicted RBP12.89□□□□□ -0.35
LINC00963-207ENST00000454635 ERO1AQ96HE7 468 aa12.89□□□□□ -0.35
LINC00963-207ENST00000454635 TRIM34Q9BYJ4 488 aa12.89□□□□□ -0.35
LINC00963-207ENST00000454635 ZFYVE28Q9HCC9 887 aa12.89□□□□□ -0.35
LINC00963-207ENST00000454635 SNRKQ9NRH2 765 aa12.89□□□□□ -0.35
LINC00963-207ENST00000454635 IGF2BP3O00425 579 aaKnown RBP eCLIP12.88□□□□□ -0.35
LINC00963-207ENST00000454635 CTNND1O60716 968 aaKnown RBP12.88□□□□□ -0.35
LINC00963-207ENST00000454635 GJA5P36382 358 aa12.88□□□□□ -0.35
LINC00963-207ENST00000454635 ZAP70P43403 619 aa12.88□□□□□ -0.35
LINC00963-207ENST00000454635 RHBDL3P58872 404 aa12.88□□□□□ -0.35
LINC00963-207ENST00000454635 PPP4CP60510 307 aa12.88□□□□□ -0.35
LINC00963-207ENST00000454635 TAF1CQ15572 869 aaPredicted RBP12.88□□□□□ -0.35
LINC00963-207ENST00000454635 SIRT2Q8IXJ6 389 aa12.88□□□□□ -0.35
LINC00963-207ENST00000454635 SCYL3Q8IZE3 742 aa12.88□□□□□ -0.35
LINC00963-207ENST00000454635 GPATCH3Q96I76 525 aa12.88□□□□□ -0.35
LINC00963-207ENST00000454635 MS4A4AQ96JQ5 239 aa12.88□□□□□ -0.35
LINC00963-207ENST00000454635 LRRCC1Q9C099 1032 aa12.88□□□□□ -0.35
LINC00963-207ENST00000454635 OSBPL5Q9H0X9 879 aaPredicted RBP12.88□□□□□ -0.35
LINC00963-207ENST00000454635 IL1RAPL2Q9NP60 686 aa12.88□□□□□ -0.35
LINC00963-207ENST00000454635 AATFQ9NY61 560 aaKnown RBP eCLIP12.88□□□□□ -0.356e-8■■■■□ 19.9
LINC00963-207ENST00000454635 TLR7Q9NYK1 1049 aaKnown RBP12.88□□□□□ -0.35
LINC00963-207ENST00000454635 APBB1O00213 710 aa12.87□□□□□ -0.35
LINC00963-207ENST00000454635 IRF6O14896 467 aa12.87□□□□□ -0.35
LINC00963-207ENST00000454635 HLA-DOAP06340 250 aa12.87□□□□□ -0.35
LINC00963-207ENST00000454635 MAP3K10Q02779 954 aa12.87□□□□□ -0.35
LINC00963-207ENST00000454635 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.87□□□□□ -0.35
LINC00963-207ENST00000454635 PI4KBQ9UBF8 816 aa12.87□□□□□ -0.35
LINC00963-207ENST00000454635 CENPFP49454 3210 aa12.86□□□□□ -0.35
LINC00963-207ENST00000454635 CCDC85CA6NKD9 419 aa12.86□□□□□ -0.35
LINC00963-207ENST00000454635 CXCL11O14625 94 aa12.86□□□□□ -0.35
LINC00963-207ENST00000454635 CYP7A1P22680 504 aa12.86□□□□□ -0.35
LINC00963-207ENST00000454635 INPP5BP32019 993 aa12.86□□□□□ -0.35
LINC00963-207ENST00000454635 CRHR2Q13324 411 aa12.86□□□□□ -0.35
LINC00963-207ENST00000454635 AAMPQ13685 434 aa12.86□□□□□ -0.35
LINC00963-207ENST00000454635 KIF22Q14807 665 aa12.86□□□□□ -0.35
LINC00963-207ENST00000454635 FASTKD5Q7L8L6 764 aaKnown RBP12.86□□□□□ -0.35
LINC00963-207ENST00000454635 ZNF384Q8TF68 577 aa12.86□□□□□ -0.35
LINC00963-207ENST00000454635 BRI3BPQ8WY22 251 aa12.86□□□□□ -0.35
LINC00963-207ENST00000454635 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.86□□□□□ -0.35
LINC00963-207ENST00000454635 DDX4Q9NQI0 724 aaKnown RBP12.86□□□□□ -0.35
LINC00963-207ENST00000454635 KCNH4Q9UQ05 1017 aa12.86□□□□□ -0.35
LINC00963-207ENST00000454635 DDTLA6NHG4 134 aaPredicted RBP12.85□□□□□ -0.35
LINC00963-207ENST00000454635 SP3Q02447 781 aa12.85□□□□□ -0.35
LINC00963-207ENST00000454635 FBXO46Q6PJ61 603 aaPredicted RBP12.85□□□□□ -0.35
LINC00963-207ENST00000454635 CRACR2BQ8N4Y2 399 aaPredicted RBP12.85□□□□□ -0.35
LINC00963-207ENST00000454635 MAGEB6Q8N7X4 407 aa12.85□□□□□ -0.35
LINC00963-207ENST00000454635 SH3RF3Q8TEJ3 882 aaPredicted RBP12.85□□□□□ -0.35
LINC00963-207ENST00000454635 AS3MTQ9HBK9 375 aa12.85□□□□□ -0.35
LINC00963-207ENST00000454635 GINM1Q9NU53 330 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms