RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 DBNLQ9UJU6 430 aaKnown RBP13.08□□□□□ -0.32
DDX39A-203ENST00000454233 IGSF3O75054 1194 aa13.07□□□□□ -0.32
DDX39A-203ENST00000454233 WDHD1O75717 1129 aaPredicted RBP13.07□□□□□ -0.32
DDX39A-203ENST00000454233 CETPP11597 493 aa13.07□□□□□ -0.32
DDX39A-203ENST00000454233 RHBDL3P58872 404 aa13.07□□□□□ -0.32
DDX39A-203ENST00000454233 PPIL2Q13356 520 aa13.07□□□□□ -0.32
DDX39A-203ENST00000454233 SNAPC2Q13487 334 aa13.07□□□□□ -0.32
DDX39A-203ENST00000454233 PDE3AQ14432 1141 aa13.07□□□□□ -0.32
DDX39A-203ENST00000454233 NAA16Q6N069 864 aaPredicted RBP13.07□□□□□ -0.32
DDX39A-203ENST00000454233 AACSQ86V21 672 aa13.07□□□□□ -0.32
DDX39A-203ENST00000454233 ZNF384Q8TF68 577 aa13.07□□□□□ -0.32
DDX39A-203ENST00000454233 BRI3BPQ8WY22 251 aa13.07□□□□□ -0.32
DDX39A-203ENST00000454233 PTPN18Q99952 460 aa13.07□□□□□ -0.32
DDX39A-203ENST00000454233 R3HDMLQ9H3Y0 253 aa13.07□□□□□ -0.32
DDX39A-203ENST00000454233 TLR7Q9NYK1 1049 aaKnown RBP13.07□□□□□ -0.32
DDX39A-203ENST00000454233 ZNF112Q9UJU3 913 aa13.07□□□□□ -0.32
DDX39A-203ENST00000454233 RFX7Q2KHR2 1363 aa13.07□□□□□ -0.32
DDX39A-203ENST00000454233 IRF6O14896 467 aa13.06□□□□□ -0.32
DDX39A-203ENST00000454233 NPM3O75607 178 aaKnown RBP13.06□□□□□ -0.32
DDX39A-203ENST00000454233 BAG3O95817 575 aa13.06□□□□□ -0.32
DDX39A-203ENST00000454233 CYP2E1P05181 493 aaPredicted RBP13.06□□□□□ -0.32
DDX39A-203ENST00000454233 PLCG2P16885 1265 aa13.06□□□□□ -0.32
DDX39A-203ENST00000454233 ZAP70P43403 619 aa13.06□□□□□ -0.32
DDX39A-203ENST00000454233 PPATQ06203 517 aa13.06□□□□□ -0.32
DDX39A-203ENST00000454233 CRHR2Q13324 411 aa13.06□□□□□ -0.32
DDX39A-203ENST00000454233 NOL9Q5SY16 702 aaKnown RBP13.06□□□□□ -0.32
DDX39A-203ENST00000454233 RHPN1Q8TCX5 695 aa13.06□□□□□ -0.32
DDX39A-203ENST00000454233 KIF1BPQ96EK5 621 aa13.06□□□□□ -0.32
DDX39A-203ENST00000454233 DDX4Q9NQI0 724 aaKnown RBP13.06□□□□□ -0.32
DDX39A-203ENST00000454233 DDTLA6NHG4 134 aaPredicted RBP13.05□□□□□ -0.32
DDX39A-203ENST00000454233 APBB1O00213 710 aa13.05□□□□□ -0.32
DDX39A-203ENST00000454233 TAF1CQ15572 869 aaPredicted RBP13.05□□□□□ -0.32
DDX39A-203ENST00000454233 SH3BP5LQ7L8J4 393 aa13.05□□□□□ -0.32
DDX39A-203ENST00000454233 TEX11Q8IYF3 940 aa13.05□□□□□ -0.32
DDX39A-203ENST00000454233 CLASRPQ8N2M8 674 aaKnown RBP13.05□□□□□ -0.32
DDX39A-203ENST00000454233 ERO1AQ96HE7 468 aa13.05□□□□□ -0.32
DDX39A-203ENST00000454233 ZFYVE28Q9HCC9 887 aa13.05□□□□□ -0.32
DDX39A-203ENST00000454233 IL1RAPL2Q9NP60 686 aa13.05□□□□□ -0.32
DDX39A-203ENST00000454233 PICK1Q9NRD5 415 aa13.05□□□□□ -0.32
DDX39A-203ENST00000454233 DOCK2Q92608 1830 aa13.04□□□□□ -0.32
DDX39A-203ENST00000454233 RAB11FIP3O75154 756 aa13.04□□□□□ -0.32
DDX39A-203ENST00000454233 SCYL3Q8IZE3 742 aa13.04□□□□□ -0.32
DDX39A-203ENST00000454233 ZCCHC17Q9NP64 241 aaKnown RBP13.04□□□□□ -0.32
DDX39A-203ENST00000454233 ATRNL1Q5VV63 1379 aa13.04□□□□□ -0.32
DDX39A-203ENST00000454233 MAST2Q6P0Q8 1798 aa13.03□□□□□ -0.32
DDX39A-203ENST00000454233 PHF20L1A8MW92 1017 aa13.03□□□□□ -0.32
DDX39A-203ENST00000454233 IDH1O75874 414 aaKnown RBP13.03□□□□□ -0.32
DDX39A-203ENST00000454233 IFIT2P09913 472 aaKnown RBP13.03□□□□□ -0.32
DDX39A-203ENST00000454233 SP3Q02447 781 aa13.03□□□□□ -0.32
DDX39A-203ENST00000454233 MAP3K10Q02779 954 aa13.03□□□□□ -0.32
DDX39A-203ENST00000454233 C20orf194Q5TEA3 1177 aa13.03□□□□□ -0.32
DDX39A-203ENST00000454233 FBXO46Q6PJ61 603 aaPredicted RBP13.03□□□□□ -0.32
DDX39A-203ENST00000454233 SIRT2Q8IXJ6 389 aa13.03□□□□□ -0.32
DDX39A-203ENST00000454233 FAM43AQ8N2R8 423 aa13.03□□□□□ -0.32
DDX39A-203ENST00000454233 SH3RF3Q8TEJ3 882 aaPredicted RBP13.03□□□□□ -0.32
DDX39A-203ENST00000454233 OSBPL5Q9H0X9 879 aaPredicted RBP13.03□□□□□ -0.32
DDX39A-203ENST00000454233 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.03□□□□□ -0.32
DDX39A-203ENST00000454233 PIH1D3Q9NQM4 214 aaKnown RBP13.03□□□□□ -0.32
DDX39A-203ENST00000454233 AATFQ9NY61 560 aaKnown RBP eCLIP13.03□□□□□ -0.32
DDX39A-203ENST00000454233 KCNH4Q9UQ05 1017 aa13.03□□□□□ -0.32
DDX39A-203ENST00000454233 BTBD19C9JJ37 291 aa13.02□□□□□ -0.33
DDX39A-203ENST00000454233 TBC1D12O60347 775 aa13.02□□□□□ -0.33
DDX39A-203ENST00000454233 CTNND1O60716 968 aaKnown RBP13.02□□□□□ -0.33
DDX39A-203ENST00000454233 CYP7A1P22680 504 aa13.02□□□□□ -0.33
DDX39A-203ENST00000454233 PPP4CP60510 307 aa13.02□□□□□ -0.33
DDX39A-203ENST00000454233 MAP3K12Q12852 859 aa13.02□□□□□ -0.33
DDX39A-203ENST00000454233 ARHGEF6Q15052 776 aa13.02□□□□□ -0.33
DDX39A-203ENST00000454233 BCL11AQ9H165 835 aa13.02□□□□□ -0.33
DDX39A-203ENST00000454233 HPS5Q9UPZ3 1129 aa13.02□□□□□ -0.33
DDX39A-203ENST00000454233 TRIM17Q9Y577 477 aa13.02□□□□□ -0.33
DDX39A-203ENST00000454233 COL2A1P02458 1487 aaPredicted RBP13.02□□□□□ -0.33
DDX39A-203ENST00000454233 CXCL11O14625 94 aa13.01□□□□□ -0.33
DDX39A-203ENST00000454233 PTPRAP18433 802 aa13.01□□□□□ -0.33
DDX39A-203ENST00000454233 TTF1Q15361 905 aaPredicted RBP13.01□□□□□ -0.33
DDX39A-203ENST00000454233 TMED8Q6PL24 325 aaPredicted RBP13.01□□□□□ -0.33
DDX39A-203ENST00000454233 ANKRD23Q86SG2 305 aa13.01□□□□□ -0.33
DDX39A-203ENST00000454233 CERS3Q8IU89 383 aa13.01□□□□□ -0.33
DDX39A-203ENST00000454233 CD99L2Q8TCZ2 262 aa13.01□□□□□ -0.33
DDX39A-203ENST00000454233 TGFBRAP1Q8WUH2 860 aa13.01□□□□□ -0.33
DDX39A-203ENST00000454233 DHX36Q9H2U1 1008 aaKnown RBP13.01□□□□□ -0.33
DDX39A-203ENST00000454233 ZHX2Q9Y6X8 837 aa13.01□□□□□ -0.33
DDX39A-203ENST00000454233 TLR2O60603 784 aa13□□□□□ -0.33
DDX39A-203ENST00000454233 OTOP1Q7RTM1 612 aa13□□□□□ -0.33
DDX39A-203ENST00000454233 ADGRA1Q86SQ6 560 aa13□□□□□ -0.33
DDX39A-203ENST00000454233 MAPKAPK5Q8IW41 473 aa13□□□□□ -0.33
DDX39A-203ENST00000454233 MAGEB6Q8N7X4 407 aa13□□□□□ -0.33
DDX39A-203ENST00000454233 ANTXR1Q9H6X2 564 aa13□□□□□ -0.33
DDX39A-203ENST00000454233 EFCC1Q9HA90 598 aa13□□□□□ -0.33
DDX39A-203ENST00000454233 PI4KBQ9UBF8 816 aa13□□□□□ -0.33
DDX39A-203ENST00000454233 HERC5Q9UII4 1024 aaKnown RBP13□□□□□ -0.33
DDX39A-203ENST00000454233 NDUFB9Q9Y6M9 179 aa13□□□□□ -0.33
DDX39A-203ENST00000454233 FAM196BA6NMK8 535 aa12.99□□□□□ -0.33
DDX39A-203ENST00000454233 PDHXO00330 501 aa12.99□□□□□ -0.33
DDX39A-203ENST00000454233 SLURP2P0DP57 97 aa12.99□□□□□ -0.33
DDX39A-203ENST00000454233 RGS19P49795 217 aa12.99□□□□□ -0.33
DDX39A-203ENST00000454233 KIF22Q14807 665 aa12.99□□□□□ -0.33
DDX39A-203ENST00000454233 FASTKD5Q7L8L6 764 aaKnown RBP12.99□□□□□ -0.33
DDX39A-203ENST00000454233 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.99□□□□□ -0.33
DDX39A-203ENST00000454233 TRIM34Q9BYJ4 488 aa12.99□□□□□ -0.33
DDX39A-203ENST00000454233 MYO5AQ9Y4I1 1855 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms