RNA–Protein interactions for RNA: ENST00000453580.1

TNFRSF4-202, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 3

Gene TNFRSF4, Length 393 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-202ENST00000453580 PLCG2P16885 1265 aa20.93■□□□□ 0.94
TNFRSF4-202ENST00000453580 MCAMP43121 646 aa20.93■□□□□ 0.94
TNFRSF4-202ENST00000453580 SP3Q02447 781 aa20.93■□□□□ 0.94
TNFRSF4-202ENST00000453580 TMED8Q6PL24 325 aaPredicted RBP20.93■□□□□ 0.94
TNFRSF4-202ENST00000453580 BRI3BPQ8WY22 251 aa20.93■□□□□ 0.94
TNFRSF4-202ENST00000453580 NSUN4Q96CB9 384 aaKnown RBP20.93■□□□□ 0.94
TNFRSF4-202ENST00000453580 HPS5Q9UPZ3 1129 aa20.93■□□□□ 0.94
TNFRSF4-202ENST00000453580 IRF6O14896 467 aa20.92■□□□□ 0.94
TNFRSF4-202ENST00000453580 CEP85Q6P2H3 762 aa20.92■□□□□ 0.94
TNFRSF4-202ENST00000453580 RPAP2Q8IXW5 612 aaPredicted RBP20.92■□□□□ 0.94
TNFRSF4-202ENST00000453580 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.92■□□□□ 0.94
TNFRSF4-202ENST00000453580 R3HDMLQ9H3Y0 253 aa20.92■□□□□ 0.94
TNFRSF4-202ENST00000453580 PICK1Q9NRD5 415 aa20.92■□□□□ 0.94
TNFRSF4-202ENST00000453580 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.92■□□□□ 0.94
TNFRSF4-202ENST00000453580 INPP5BP32019 993 aa20.91■□□□□ 0.94
TNFRSF4-202ENST00000453580 CERS3Q8IU89 383 aa20.91■□□□□ 0.94
TNFRSF4-202ENST00000453580 PANK1Q8TE04 598 aa20.91■□□□□ 0.94
TNFRSF4-202ENST00000453580 CNKSR2Q8WXI2 1034 aa20.91■□□□□ 0.94
TNFRSF4-202ENST00000453580 DBNDD2Q9BQY9 259 aa20.91■□□□□ 0.94
TNFRSF4-202ENST00000453580 TRIM17Q9Y577 477 aa20.91■□□□□ 0.94
TNFRSF4-202ENST00000453580 MAST2Q6P0Q8 1798 aa20.9■□□□□ 0.94
TNFRSF4-202ENST00000453580 COL2A1P02458 1487 aaPredicted RBP20.9■□□□□ 0.94
TNFRSF4-202ENST00000453580 RFX7Q2KHR2 1363 aa20.9■□□□□ 0.94
TNFRSF4-202ENST00000453580 MAP3K10Q02779 954 aa20.9■□□□□ 0.94
TNFRSF4-202ENST00000453580 PICALMQ13492 652 aa20.9■□□□□ 0.94
TNFRSF4-202ENST00000453580 KIF22Q14807 665 aa20.9■□□□□ 0.94
TNFRSF4-202ENST00000453580 NAA16Q6N069 864 aaPredicted RBP20.9■□□□□ 0.94
TNFRSF4-202ENST00000453580 TBC1D9Q6ZT07 1266 aa20.9■□□□□ 0.94
TNFRSF4-202ENST00000453580 RCAN3Q9UKA8 241 aa20.9■□□□□ 0.94
TNFRSF4-202ENST00000453580 ATRNL1Q5VV63 1379 aa20.89■□□□□ 0.93
TNFRSF4-202ENST00000453580 CXCL11O14625 94 aa20.89■□□□□ 0.93
TNFRSF4-202ENST00000453580 TBC1D12O60347 775 aa20.89■□□□□ 0.93
TNFRSF4-202ENST00000453580 CTNND1O60716 968 aaKnown RBP20.89■□□□□ 0.93
TNFRSF4-202ENST00000453580 PI16Q6UXB8 463 aa20.89■□□□□ 0.93
TNFRSF4-202ENST00000453580 SCYL3Q8IZE3 742 aa20.89■□□□□ 0.93
TNFRSF4-202ENST00000453580 EFCC1Q9HA90 598 aa20.89■□□□□ 0.93
TNFRSF4-202ENST00000453580 KCNH4Q9UQ05 1017 aa20.89■□□□□ 0.93
TNFRSF4-202ENST00000453580 TLR2O60603 784 aa20.88■□□□□ 0.93
TNFRSF4-202ENST00000453580 RHBDL3P58872 404 aa20.88■□□□□ 0.93
TNFRSF4-202ENST00000453580 OTOP1Q7RTM1 612 aa20.88■□□□□ 0.93
TNFRSF4-202ENST00000453580 ANKRD23Q86SG2 305 aa20.88■□□□□ 0.93
TNFRSF4-202ENST00000453580 FAM43AQ8N2R8 423 aa20.88■□□□□ 0.93
TNFRSF4-202ENST00000453580 DHX36Q9H2U1 1008 aaKnown RBP20.88■□□□□ 0.93
TNFRSF4-202ENST00000453580 GNRH1P01148 92 aa20.87■□□□□ 0.93
TNFRSF4-202ENST00000453580 FASTKD5Q7L8L6 764 aaKnown RBP20.87■□□□□ 0.93
TNFRSF4-202ENST00000453580 ZFPM1Q8IX07 1006 aa20.87■□□□□ 0.93
TNFRSF4-202ENST00000453580 TEX11Q8IYF3 940 aa20.87■□□□□ 0.93
TNFRSF4-202ENST00000453580 TBC1D2Q9BYX2 928 aa20.87■□□□□ 0.93
TNFRSF4-202ENST00000453580 DDTLA6NHG4 134 aaPredicted RBP20.86■□□□□ 0.93
TNFRSF4-202ENST00000453580 BTBD19C9JJ37 291 aa20.86■□□□□ 0.93
TNFRSF4-202ENST00000453580 CD99L2Q8TCZ2 262 aa20.86■□□□□ 0.93
TNFRSF4-202ENST00000453580 SNRKQ9NRH2 765 aa20.86■□□□□ 0.93
TNFRSF4-202ENST00000453580 DBNLQ9UJU6 430 aaKnown RBP20.86■□□□□ 0.93
TNFRSF4-202ENST00000453580 PHF20L1A8MW92 1017 aa20.85■□□□□ 0.93
TNFRSF4-202ENST00000453580 PPP4CP60510 307 aa20.85■□□□□ 0.93
TNFRSF4-202ENST00000453580 PDE3AQ14432 1141 aa20.85■□□□□ 0.93
TNFRSF4-202ENST00000453580 CLASRPQ8N2M8 674 aaKnown RBP20.85■□□□□ 0.93
TNFRSF4-202ENST00000453580 ZNF384Q8TF68 577 aa20.85■□□□□ 0.93
TNFRSF4-202ENST00000453580 EAF2Q96CJ1 260 aaPredicted RBP20.85■□□□□ 0.93
TNFRSF4-202ENST00000453580 OSBPL5Q9H0X9 879 aaPredicted RBP20.85■□□□□ 0.93
TNFRSF4-202ENST00000453580 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.85■□□□□ 0.93
TNFRSF4-202ENST00000453580 DDX4Q9NQI0 724 aaKnown RBP20.85■□□□□ 0.93
TNFRSF4-202ENST00000453580 HERC5Q9UII4 1024 aaKnown RBP20.85■□□□□ 0.93
TNFRSF4-202ENST00000453580 PTPN22Q9Y2R2 807 aa20.85■□□□□ 0.93
TNFRSF4-202ENST00000453580 DOCK1Q14185 1865 aa20.85■□□□□ 0.93
TNFRSF4-202ENST00000453580 CYP2E1P05181 493 aaPredicted RBP20.84■□□□□ 0.93
TNFRSF4-202ENST00000453580 SH3BP5LQ7L8J4 393 aa20.84■□□□□ 0.93
TNFRSF4-202ENST00000453580 AACSQ86V21 672 aa20.84■□□□□ 0.93
TNFRSF4-202ENST00000453580 KIF1BPQ96EK5 621 aa20.84■□□□□ 0.93
TNFRSF4-202ENST00000453580 CCDC8Q9H0W5 538 aaPredicted RBP20.84■□□□□ 0.93
TNFRSF4-202ENST00000453580 ZBTB40Q9NUA8 1239 aa20.84■□□□□ 0.93
TNFRSF4-202ENST00000453580 EXOC6BQ9Y2D4 811 aa20.84■□□□□ 0.93
TNFRSF4-202ENST00000453580 ZHX2Q9Y6X8 837 aa20.84■□□□□ 0.93
TNFRSF4-202ENST00000453580 PDHXO00330 501 aa20.83■□□□□ 0.93
TNFRSF4-202ENST00000453580 RAB11FIP3O75154 756 aa20.83■□□□□ 0.93
TNFRSF4-202ENST00000453580 PTPRAP18433 802 aa20.83■□□□□ 0.93
TNFRSF4-202ENST00000453580 ZAP70P43403 619 aa20.83■□□□□ 0.93
TNFRSF4-202ENST00000453580 PRMT2P55345 433 aa20.83■□□□□ 0.93
TNFRSF4-202ENST00000453580 MAP3K12Q12852 859 aa20.83■□□□□ 0.93
TNFRSF4-202ENST00000453580 TTF1Q15361 905 aaPredicted RBP20.83■□□□□ 0.93
TNFRSF4-202ENST00000453580 RHPN1Q8TCX5 695 aa20.83■□□□□ 0.93
TNFRSF4-202ENST00000453580 PARK7Q99497 189 aaKnown RBP20.83■□□□□ 0.93
TNFRSF4-202ENST00000453580 PI4KBQ9UBF8 816 aa20.83■□□□□ 0.93
TNFRSF4-202ENST00000453580 COG6Q9Y2V7 657 aa20.83■□□□□ 0.93
TNFRSF4-202ENST00000453580 SOX10P56693 466 aa20.82■□□□□ 0.92
TNFRSF4-202ENST00000453580 NBPF11Q86T75 865 aa20.82■□□□□ 0.92
TNFRSF4-202ENST00000453580 TRIM34Q9BYJ4 488 aa20.82■□□□□ 0.92
TNFRSF4-202ENST00000453580 AATFQ9NY61 560 aaKnown RBP eCLIP20.82■□□□□ 0.92
TNFRSF4-202ENST00000453580 SLC45A1Q9Y2W3 748 aa20.82■□□□□ 0.92
TNFRSF4-202ENST00000453580 IDH1O75874 414 aaKnown RBP20.81■□□□□ 0.92
TNFRSF4-202ENST00000453580 IFIT2P09913 472 aaKnown RBP20.81■□□□□ 0.92
TNFRSF4-202ENST00000453580 HOXD10P28358 340 aa20.81■□□□□ 0.92
TNFRSF4-202ENST00000453580 FOXP4Q8IVH2 680 aaPredicted RBP20.81■□□□□ 0.92
TNFRSF4-202ENST00000453580 SH3RF3Q8TEJ3 882 aaPredicted RBP20.81■□□□□ 0.92
TNFRSF4-202ENST00000453580 AFG3L2Q9Y4W6 797 aa20.81■□□□□ 0.92
TNFRSF4-202ENST00000453580 A0A0G2JLL6 359 aaPredicted RBP20.8■□□□□ 0.92
TNFRSF4-202ENST00000453580 LACTBP83111 547 aaPredicted RBP20.8■□□□□ 0.92
TNFRSF4-202ENST00000453580 PRRT2Q7Z6L0 340 aaPredicted RBP20.8■□□□□ 0.92
TNFRSF4-202ENST00000453580 AS3MTQ9HBK9 375 aa20.8■□□□□ 0.92
TNFRSF4-202ENST00000453580 GINM1Q9NU53 330 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms