RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 MYH7P12883 1935 aa17.57■□□□□ 0.4
NCKIPSD-207ENST00000453349 RFX7Q2KHR2 1363 aa17.56■□□□□ 0.4
NCKIPSD-207ENST00000453349 PPP1R12BO60237 982 aaPredicted RBP17.56■□□□□ 0.4
NCKIPSD-207ENST00000453349 HSPA6P17066 643 aa17.56■□□□□ 0.4
NCKIPSD-207ENST00000453349 ARMC9Q7Z3E5 817 aa17.56■□□□□ 0.4
NCKIPSD-207ENST00000453349 SKAP1Q86WV1 359 aa17.56■□□□□ 0.4
NCKIPSD-207ENST00000453349 MAPKAPK5Q8IW41 473 aa17.56■□□□□ 0.4
NCKIPSD-207ENST00000453349 ZFPM1Q8IX07 1006 aa17.56■□□□□ 0.4
NCKIPSD-207ENST00000453349 DDRGK1Q96HY6 314 aa17.56■□□□□ 0.4
NCKIPSD-207ENST00000453349 OSBPL5Q9H0X9 879 aaPredicted RBP17.56■□□□□ 0.4
NCKIPSD-207ENST00000453349 DHX36Q9H2U1 1008 aaKnown RBP17.56■□□□□ 0.4
NCKIPSD-207ENST00000453349 GBA2Q9HCG7 927 aaPredicted RBP17.56■□□□□ 0.4
NCKIPSD-207ENST00000453349 CREBZFQ9NS37 354 aa17.56■□□□□ 0.4
NCKIPSD-207ENST00000453349 SLC4A4Q9Y6R1 1079 aa17.56■□□□□ 0.4
NCKIPSD-207ENST00000453349 GNAT2P19087 354 aa17.55■□□□□ 0.4
NCKIPSD-207ENST00000453349 FKBP1BP68106 108 aa17.55■□□□□ 0.4
NCKIPSD-207ENST00000453349 PRKG1Q13976 671 aa17.55■□□□□ 0.4
NCKIPSD-207ENST00000453349 MCMDC2Q4G0Z9 681 aa17.55■□□□□ 0.4
NCKIPSD-207ENST00000453349 STRBPQ96SI9 672 aaKnown RBP17.55■□□□□ 0.4
NCKIPSD-207ENST00000453349 DIAPH3Q9NSV4 1193 aa17.55■□□□□ 0.4
NCKIPSD-207ENST00000453349 ATP8A2Q9NTI2 1148 aa17.55■□□□□ 0.4
NCKIPSD-207ENST00000453349 RPAP1Q9BWH6 1393 aaPredicted RBP17.54■□□□□ 0.4
NCKIPSD-207ENST00000453349 FLT1P17948 1338 aa17.54■□□□□ 0.4
NCKIPSD-207ENST00000453349 DDTLA6NHG4 134 aaPredicted RBP17.54■□□□□ 0.4
NCKIPSD-207ENST00000453349 M0R2C6 588 aa17.54■□□□□ 0.4
NCKIPSD-207ENST00000453349 DCAF15Q66K64 600 aa17.54■□□□□ 0.4
NCKIPSD-207ENST00000453349 CSRNP1Q96S65 589 aa17.54■□□□□ 0.4
NCKIPSD-207ENST00000453349 SEC62Q99442 399 aaKnown RBP17.54■□□□□ 0.4
NCKIPSD-207ENST00000453349 ABT1Q9ULW3 272 aaKnown RBP17.54■□□□□ 0.4
NCKIPSD-207ENST00000453349 TRPM7Q96QT4 1865 aa17.54■□□□□ 0.4
NCKIPSD-207ENST00000453349 GPAA1O43292 621 aa17.53■□□□□ 0.4
NCKIPSD-207ENST00000453349 MFAP1P55081 439 aaKnown RBP17.53■□□□□ 0.4
NCKIPSD-207ENST00000453349 NMIQ13287 307 aaPredicted RBP17.53■□□□□ 0.4
NCKIPSD-207ENST00000453349 SDR42E1Q8WUS8 393 aa17.53■□□□□ 0.4
NCKIPSD-207ENST00000453349 FAM227BQ96M60 508 aa17.53■□□□□ 0.4
NCKIPSD-207ENST00000453349 PI4KBQ9UBF8 816 aa17.53■□□□□ 0.4
NCKIPSD-207ENST00000453349 SAP30BPQ9UHR5 308 aaKnown RBP17.53■□□□□ 0.4
NCKIPSD-207ENST00000453349 ANGEL1Q9UNK9 670 aaKnown RBP17.53■□□□□ 0.4
NCKIPSD-207ENST00000453349 PATL2C9JE40 543 aaKnown RBP17.52■□□□□ 0.4
NCKIPSD-207ENST00000453349 PRKAB2O43741 272 aa17.52■□□□□ 0.4
NCKIPSD-207ENST00000453349 APPP05067 770 aa17.52■□□□□ 0.4
NCKIPSD-207ENST00000453349 POLR3DP05423 398 aaPredicted RBP17.52■□□□□ 0.4
NCKIPSD-207ENST00000453349 HLA-DOAP06340 250 aa17.52■□□□□ 0.4
NCKIPSD-207ENST00000453349 IREB2P48200 963 aaKnown RBP17.52■□□□□ 0.4
NCKIPSD-207ENST00000453349 BMP2KLQ5H9B9 411 aa17.52■□□□□ 0.4
NCKIPSD-207ENST00000453349 CWC27Q6UX04 472 aaKnown RBP17.52■□□□□ 0.4
NCKIPSD-207ENST00000453349 MIGA2Q7L4E1 593 aa17.52■□□□□ 0.4
NCKIPSD-207ENST00000453349 SH3BP5LQ7L8J4 393 aa17.52■□□□□ 0.4
NCKIPSD-207ENST00000453349 TTC6Q86TZ1 520 aa17.52■□□□□ 0.4
NCKIPSD-207ENST00000453349 CDAN1Q8IWY9 1227 aa17.52■□□□□ 0.4
NCKIPSD-207ENST00000453349 AMOTL1Q8IY63 956 aa17.52■□□□□ 0.4
NCKIPSD-207ENST00000453349 RUFY2Q8WXA3 655 aa17.52■□□□□ 0.4
NCKIPSD-207ENST00000453349 DCP1AQ9NPI6 582 aaPredicted RBP17.52■□□□□ 0.4
NCKIPSD-207ENST00000453349 PALD1Q9ULE6 856 aa17.52■□□□□ 0.4
NCKIPSD-207ENST00000453349 TLL2Q9Y6L7 1015 aa17.52■□□□□ 0.4
NCKIPSD-207ENST00000453349 USP2O75604 605 aaPredicted RBP17.51■□□□□ 0.39
NCKIPSD-207ENST00000453349 FOXP4Q8IVH2 680 aaPredicted RBP17.51■□□□□ 0.39
NCKIPSD-207ENST00000453349 TRIM34Q9BYJ4 488 aa17.51■□□□□ 0.39
NCKIPSD-207ENST00000453349 ZNF341Q9BYN7 854 aa17.51■□□□□ 0.39
NCKIPSD-207ENST00000453349 MCM9Q9NXL9 1143 aa17.51■□□□□ 0.39
NCKIPSD-207ENST00000453349 ATRNL1Q5VV63 1379 aa17.51■□□□□ 0.39
NCKIPSD-207ENST00000453349 AK9Q5TCS8 1911 aa17.51■□□□□ 0.39
NCKIPSD-207ENST00000453349 COL2A1P02458 1487 aaPredicted RBP17.5■□□□□ 0.39
NCKIPSD-207ENST00000453349 A0A0D9SFI3 127 aa17.5■□□□□ 0.39
NCKIPSD-207ENST00000453349 UBE2Q2LH0YL09 131 aa17.5■□□□□ 0.39
NCKIPSD-207ENST00000453349 HUNKP57058 714 aa17.5■□□□□ 0.39
NCKIPSD-207ENST00000453349 MAP3K11Q16584 847 aa17.5■□□□□ 0.39
NCKIPSD-207ENST00000453349 DEFB115Q30KQ5 88 aa17.5■□□□□ 0.39
NCKIPSD-207ENST00000453349 GIMAP6Q6P9H5 292 aa17.5■□□□□ 0.39
NCKIPSD-207ENST00000453349 CCDC129Q6ZRS4 1044 aa17.5■□□□□ 0.39
NCKIPSD-207ENST00000453349 MOB2Q70IA6 237 aa17.5■□□□□ 0.39
NCKIPSD-207ENST00000453349 SAPCD2Q86UD0 394 aa17.5■□□□□ 0.39
NCKIPSD-207ENST00000453349 CRACR2BQ8N4Y2 399 aaPredicted RBP17.5■□□□□ 0.39
NCKIPSD-207ENST00000453349 NACAP1Q9BZK3 213 aa17.5■□□□□ 0.39
NCKIPSD-207ENST00000453349 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.5■□□□□ 0.39
NCKIPSD-207ENST00000453349 MKRN1Q9UHC7 482 aaKnown RBP17.5■□□□□ 0.39
NCKIPSD-207ENST00000453349 FZD1Q9UP38 647 aa17.5■□□□□ 0.39
NCKIPSD-207ENST00000453349 UNCXA6NJT0 531 aa17.49■□□□□ 0.39
NCKIPSD-207ENST00000453349 GSG1L2A8MUP6 293 aa17.49■□□□□ 0.39
NCKIPSD-207ENST00000453349 TBC1D12O60347 775 aa17.49■□□□□ 0.39
NCKIPSD-207ENST00000453349 CHMLP26374 656 aa17.49■□□□□ 0.39
NCKIPSD-207ENST00000453349 HHIPL1Q96JK4 782 aa17.49■□□□□ 0.39
NCKIPSD-207ENST00000453349 HERC5Q9UII4 1024 aaKnown RBP17.49■□□□□ 0.39
NCKIPSD-207ENST00000453349 GTF3C3Q9Y5Q9 886 aa17.49■□□□□ 0.39
NCKIPSD-207ENST00000453349 FOCADQ5VW36 1801 aa17.49■□□□□ 0.39
NCKIPSD-207ENST00000453349 MAP3K9P80192 1104 aa17.48■□□□□ 0.39
NCKIPSD-207ENST00000453349 MAP3K10Q02779 954 aa17.48■□□□□ 0.39
NCKIPSD-207ENST00000453349 SLC4A8Q2Y0W8 1093 aa17.48■□□□□ 0.39
NCKIPSD-207ENST00000453349 ANKRD13AQ8IZ07 590 aa17.48■□□□□ 0.39
NCKIPSD-207ENST00000453349 KLRG1Q96E93 195 aa17.48■□□□□ 0.39
NCKIPSD-207ENST00000453349 SSC5DA1L4H1 1573 aa17.48■□□□□ 0.39
NCKIPSD-207ENST00000453349 PAPPA2Q9BXP8 1791 aa17.48■□□□□ 0.39
NCKIPSD-207ENST00000453349 CDK5RAP2Q96SN8 1893 aa17.48■□□□□ 0.39
NCKIPSD-207ENST00000453349 CCDC171Q6TFL3 1326 aa17.47■□□□□ 0.39
NCKIPSD-207ENST00000453349 USP17L12C9JPN9 530 aa17.47■□□□□ 0.39
NCKIPSD-207ENST00000453349 USP17L21D6R901 530 aa17.47■□□□□ 0.39
NCKIPSD-207ENST00000453349 TDO2P48775 406 aa17.47■□□□□ 0.39
NCKIPSD-207ENST00000453349 HTRA3P83110 453 aa17.47■□□□□ 0.39
NCKIPSD-207ENST00000453349 LDLRAD1Q5T700 205 aa17.47■□□□□ 0.39
NCKIPSD-207ENST00000453349 CTR9Q6PD62 1173 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms