RNA–Protein interactions for RNA: ENST00000453341.1

TNFRSF25-208, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-208ENST00000453341 PAK6Q9NQU5 681 aaPredicted RBP27.27■■□□□ 1.96
TNFRSF25-208ENST00000453341 USP40Q9NVE5 1235 aa27.27■■□□□ 1.96
TNFRSF25-208ENST00000453341 PTPRAP18433 802 aa27.26■■□□□ 1.95
TNFRSF25-208ENST00000453341 IRF5Q13568 498 aa27.26■■□□□ 1.95
TNFRSF25-208ENST00000453341 FASTKD5Q7L8L6 764 aaKnown RBP27.26■■□□□ 1.95
TNFRSF25-208ENST00000453341 SCYL3Q8IZE3 742 aa27.26■■□□□ 1.95
TNFRSF25-208ENST00000453341 AFG3L2Q9Y4W6 797 aa27.26■■□□□ 1.95
TNFRSF25-208ENST00000453341 PHIPQ8WWQ0 1821 aa27.25■■□□□ 1.95
TNFRSF25-208ENST00000453341 SLC5A1P13866 664 aa27.25■■□□□ 1.95
TNFRSF25-208ENST00000453341 GADL1Q6ZQY3 521 aa27.25■■□□□ 1.95
TNFRSF25-208ENST00000453341 CRISPLD2Q9H0B8 497 aa27.25■■□□□ 1.95
TNFRSF25-208ENST00000453341 TNPO2O14787 897 aaKnown RBP27.24■■□□□ 1.95
TNFRSF25-208ENST00000453341 SLURP2P0DP57 97 aa27.24■■□□□ 1.95
TNFRSF25-208ENST00000453341 ZEB1P37275 1124 aaPredicted RBP27.24■■□□□ 1.95
TNFRSF25-208ENST00000453341 RFX5P48382 616 aaPredicted RBP27.24■■□□□ 1.95
TNFRSF25-208ENST00000453341 SH3BP5LQ7L8J4 393 aa27.24■■□□□ 1.95
TNFRSF25-208ENST00000453341 DIS3LQ8TF46 1054 aaKnown RBP27.24■■□□□ 1.95
TNFRSF25-208ENST00000453341 LPIN2Q92539 896 aa27.24■■□□□ 1.95
TNFRSF25-208ENST00000453341 PAWRQ96IZ0 340 aaKnown RBP27.24■■□□□ 1.95
TNFRSF25-208ENST00000453341 SLC45A1Q9Y2W3 748 aa27.24■■□□□ 1.95
TNFRSF25-208ENST00000453341 PICK1Q9NRD5 415 aa27.23■■□□□ 1.95
TNFRSF25-208ENST00000453341 EYA2O00167 538 aa27.22■■□□□ 1.95
TNFRSF25-208ENST00000453341 RGS3P49796 1198 aa27.22■■□□□ 1.95
TNFRSF25-208ENST00000453341 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.22■■□□□ 1.95
TNFRSF25-208ENST00000453341 RFX7Q2KHR2 1363 aa27.22■■□□□ 1.95
TNFRSF25-208ENST00000453341 DOCK1Q14185 1865 aa27.21■■□□□ 1.95
TNFRSF25-208ENST00000453341 UNC80Q8N2C7 3258 aa27.21■■□□□ 1.95
TNFRSF25-208ENST00000453341 LDHBP07195 334 aaKnown RBP27.21■■□□□ 1.95
TNFRSF25-208ENST00000453341 ATG9AQ7Z3C6 839 aa27.21■■□□□ 1.95
TNFRSF25-208ENST00000453341 GDF15Q99988 308 aa27.21■■□□□ 1.95
TNFRSF25-208ENST00000453341 USP44Q9H0E7 712 aa27.21■■□□□ 1.95
TNFRSF25-208ENST00000453341 MYH2Q9UKX2 1941 aa27.21■■□□□ 1.95
TNFRSF25-208ENST00000453341 CAPN2P17655 700 aa27.2■■□□□ 1.94
TNFRSF25-208ENST00000453341 SMCR8Q8TEV9 937 aaPredicted RBP27.2■■□□□ 1.94
TNFRSF25-208ENST00000453341 IDI2Q9BXS1 227 aa27.2■■□□□ 1.94
TNFRSF25-208ENST00000453341 MRS2Q9HD23 443 aa27.2■■□□□ 1.94
TNFRSF25-208ENST00000453341 TAOK2Q9UL54 1235 aa27.2■■□□□ 1.94
TNFRSF25-208ENST00000453341 MAP3K10Q02779 954 aa27.19■■□□□ 1.94
TNFRSF25-208ENST00000453341 CCDC84Q86UT8 332 aaPredicted RBP27.19■■□□□ 1.94
TNFRSF25-208ENST00000453341 ANKRD13CQ8N6S4 541 aa27.19■■□□□ 1.94
TNFRSF25-208ENST00000453341 SALL1Q9NSC2 1324 aa27.18■■□□□ 1.94
TNFRSF25-208ENST00000453341 TRIM75PA6NK02 468 aa27.18■■□□□ 1.94
TNFRSF25-208ENST00000453341 ENTPD3O75355 529 aa27.18■■□□□ 1.94
TNFRSF25-208ENST00000453341 NECAB2Q7Z6G3 386 aa27.18■■□□□ 1.94
TNFRSF25-208ENST00000453341 MRPL50Q8N5N7 158 aaKnown RBP27.18■■□□□ 1.94
TNFRSF25-208ENST00000453341 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.18■■□□□ 1.94
TNFRSF25-208ENST00000453341 DDTLA6NHG4 134 aaPredicted RBP27.17■■□□□ 1.94
TNFRSF25-208ENST00000453341 BMP8BP34820 402 aa27.17■■□□□ 1.94
TNFRSF25-208ENST00000453341 C7orf61Q8IZ16 206 aa27.17■■□□□ 1.94
TNFRSF25-208ENST00000453341 DDX4Q9NQI0 724 aaKnown RBP27.17■■□□□ 1.94
TNFRSF25-208ENST00000453341 ZMYND8Q9ULU4 1186 aaPredicted RBP27.17■■□□□ 1.94
TNFRSF25-208ENST00000453341 AGTPBP1Q9UPW5 1226 aa27.17■■□□□ 1.94
TNFRSF25-208ENST00000453341 TREML2Q5T2D2 321 aa27.16■■□□□ 1.94
TNFRSF25-208ENST00000453341 COA7Q96BR5 231 aa27.16■■□□□ 1.94
TNFRSF25-208ENST00000453341 LRRFIP2Q9Y608 721 aaKnown RBP27.16■■□□□ 1.94
TNFRSF25-208ENST00000453341 GAKO14976 1311 aa27.16■■□□□ 1.94
TNFRSF25-208ENST00000453341 CTNND1O60716 968 aaKnown RBP27.15■■□□□ 1.94
TNFRSF25-208ENST00000453341 PHKA1P46020 1223 aa27.15■■□□□ 1.94
TNFRSF25-208ENST00000453341 MNX1P50219 401 aaPredicted RBP27.15■■□□□ 1.94
TNFRSF25-208ENST00000453341 ATP2B3Q16720 1220 aa27.15■■□□□ 1.94
TNFRSF25-208ENST00000453341 Q7L0L9 218 aa27.15■■□□□ 1.94
TNFRSF25-208ENST00000453341 ZSCAN29Q8IWY8 852 aaPredicted RBP27.15■■□□□ 1.94
TNFRSF25-208ENST00000453341 FAM110CQ1W6H9 321 aa27.14■■□□□ 1.94
TNFRSF25-208ENST00000453341 LAMA2P24043 3122 aaKnown RBP27.13■■□□□ 1.93
TNFRSF25-208ENST00000453341 GPR153Q6NV75 609 aa27.13■■□□□ 1.93
TNFRSF25-208ENST00000453341 DEFB123Q8N688 67 aa27.13■■□□□ 1.93
TNFRSF25-208ENST00000453341 SIL1Q9H173 461 aa27.13■■□□□ 1.93
TNFRSF25-208ENST00000453341 GNL3LQ9NVN8 582 aaKnown RBP27.13■■□□□ 1.93
TNFRSF25-208ENST00000453341 DENND2AQ9ULE3 1009 aa27.13■■□□□ 1.93
TNFRSF25-208ENST00000453341 DDX60LQ5H9U9 1706 aaKnown RBP27.13■■□□□ 1.93
TNFRSF25-208ENST00000453341 TRIM32Q13049 653 aa27.12■■□□□ 1.93
TNFRSF25-208ENST00000453341 ANKLE1Q8NAG6 615 aa27.12■■□□□ 1.93
TNFRSF25-208ENST00000453341 PTPRCP08575 1304 aa27.12■■□□□ 1.93
TNFRSF25-208ENST00000453341 LOC285556D6RIA3 1793 aa27.12■■□□□ 1.93
TNFRSF25-208ENST00000453341 SEMA3EO15041 775 aa27.11■■□□□ 1.93
TNFRSF25-208ENST00000453341 HMGCRP04035 888 aa27.11■■□□□ 1.93
TNFRSF25-208ENST00000453341 PICALMQ13492 652 aa27.11■■□□□ 1.93
TNFRSF25-208ENST00000453341 SYN1P17600 705 aa27.1■■□□□ 1.93
TNFRSF25-208ENST00000453341 GJD2Q9UKL4 321 aa27.1■■□□□ 1.93
TNFRSF25-208ENST00000453341 PNMA3Q9UL41 463 aa27.1■■□□□ 1.93
TNFRSF25-208ENST00000453341 PLXNB2O15031 1838 aa27.1■■□□□ 1.93
TNFRSF25-208ENST00000453341 ADORA1P30542 326 aa27.09■■□□□ 1.93
TNFRSF25-208ENST00000453341 MAGEA10P43363 369 aaPredicted RBP27.09■■□□□ 1.93
TNFRSF25-208ENST00000453341 LRIT3Q3SXY7 679 aa27.09■■□□□ 1.93
TNFRSF25-208ENST00000453341 CEP126Q9P2H0 1117 aa27.09■■□□□ 1.93
TNFRSF25-208ENST00000453341 FAM196BA6NMK8 535 aa27.08■■□□□ 1.93
TNFRSF25-208ENST00000453341 CIAO1O76071 339 aa27.08■■□□□ 1.93
TNFRSF25-208ENST00000453341 BTDP43251 543 aa27.08■■□□□ 1.93
TNFRSF25-208ENST00000453341 PROCA1Q8NCQ7 364 aaPredicted RBP27.08■■□□□ 1.93
TNFRSF25-208ENST00000453341 FAM163AQ96GL9 167 aaPredicted RBP27.08■■□□□ 1.93
TNFRSF25-208ENST00000453341 NBPF3Q9H094 633 aa27.08■■□□□ 1.93
TNFRSF25-208ENST00000453341 RPTORQ8N122 1335 aa27.08■■□□□ 1.93
TNFRSF25-208ENST00000453341 RASGRF1Q13972 1273 aa27.07■■□□□ 1.92
TNFRSF25-208ENST00000453341 CCDC102BQ68D86 513 aa27.07■■□□□ 1.92
TNFRSF25-208ENST00000453341 DZIP1Q86YF9 867 aaKnown RBP27.07■■□□□ 1.92
TNFRSF25-208ENST00000453341 MTMR10Q9NXD2 777 aa27.07■■□□□ 1.92
TNFRSF25-208ENST00000453341 FBXO3Q9UK99 471 aa27.07■■□□□ 1.92
TNFRSF25-208ENST00000453341 STXBP5LQ9Y2K9 1186 aa27.07■■□□□ 1.92
TNFRSF25-208ENST00000453341 DNAH12Q6ZR08 3092 aa27.06■■□□□ 1.92
TNFRSF25-208ENST00000453341 ZBTB22O15209 634 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms