RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 MKRN1Q9UHC7 482 aaKnown RBP13.89□□□□□ -0.19
SCN9A-204ENST00000452182 ASTN2O75129 1339 aaPredicted RBP13.88□□□□□ -0.19
SCN9A-204ENST00000452182 COL2A1P02458 1487 aaPredicted RBP13.88□□□□□ -0.19
SCN9A-204ENST00000452182 DCPSQ96C86 337 aaKnown RBP13.88□□□□□ -0.19
SCN9A-204ENST00000452182 IL25Q9H293 177 aa13.88□□□□□ -0.19
SCN9A-204ENST00000452182 POLR2AP24928 1970 aaKnown RBP13.88□□□□□ -0.19
SCN9A-204ENST00000452182 DDX60LQ5H9U9 1706 aaKnown RBP13.88□□□□□ -0.19
SCN9A-204ENST00000452182 PATL2C9JE40 543 aaKnown RBP13.87□□□□□ -0.19
SCN9A-204ENST00000452182 KIF3CO14782 793 aa13.87□□□□□ -0.19
SCN9A-204ENST00000452182 TNNI2P48788 182 aa13.87□□□□□ -0.19
SCN9A-204ENST00000452182 NFIAQ12857 509 aa13.87□□□□□ -0.19
SCN9A-204ENST00000452182 CCDC129Q6ZRS4 1044 aa13.87□□□□□ -0.19
SCN9A-204ENST00000452182 ZNF784Q8NCA9 323 aaPredicted RBP13.87□□□□□ -0.19
SCN9A-204ENST00000452182 NAV1Q8NEY1 1877 aa13.87□□□□□ -0.19
SCN9A-204ENST00000452182 TGFBRAP1Q8WUH2 860 aa13.87□□□□□ -0.19
SCN9A-204ENST00000452182 FAM151AQ8WW52 585 aa13.87□□□□□ -0.19
SCN9A-204ENST00000452182 VEZTQ9HBM0 779 aa13.87□□□□□ -0.19
SCN9A-204ENST00000452182 FAM198AQ9UFP1 575 aa13.87□□□□□ -0.19
SCN9A-204ENST00000452182 PPP2R3BQ9Y5P8 575 aa13.87□□□□□ -0.19
SCN9A-204ENST00000452182 SLC4A4Q9Y6R1 1079 aa13.87□□□□□ -0.19
SCN9A-204ENST00000452182 FLT1P17948 1338 aa13.87□□□□□ -0.19
SCN9A-204ENST00000452182 CNTNAP1P78357 1384 aa13.87□□□□□ -0.19
SCN9A-204ENST00000452182 GSG1L2A8MUP6 293 aa13.86□□□□□ -0.19
SCN9A-204ENST00000452182 PRKAB2O43741 272 aa13.86□□□□□ -0.19
SCN9A-204ENST00000452182 POTEIP0CG38 1075 aa13.86□□□□□ -0.19
SCN9A-204ENST00000452182 POTEJP0CG39 1038 aa13.86□□□□□ -0.19
SCN9A-204ENST00000452182 USP5P45974 858 aa13.86□□□□□ -0.19
SCN9A-204ENST00000452182 CACNB3P54284 484 aa13.86□□□□□ -0.19
SCN9A-204ENST00000452182 SDR42E1Q8WUS8 393 aa13.86□□□□□ -0.19
SCN9A-204ENST00000452182 DCP1AQ9NPI6 582 aaPredicted RBP13.86□□□□□ -0.19
SCN9A-204ENST00000452182 DDX4Q9NQI0 724 aaKnown RBP13.86□□□□□ -0.19
SCN9A-204ENST00000452182 ZMYM6O95789 1325 aa13.86□□□□□ -0.19
SCN9A-204ENST00000452182 MYH1P12882 1939 aa13.86□□□□□ -0.19
SCN9A-204ENST00000452182 ATRNL1Q5VV63 1379 aa13.86□□□□□ -0.19
SCN9A-204ENST00000452182 TCP10L2B9ZVM9 353 aa13.86□□□□□ -0.19
SCN9A-204ENST00000452182 FOXP2O15409 715 aa13.86□□□□□ -0.19
SCN9A-204ENST00000452182 EIF5BO60841 1220 aaKnown RBP13.86□□□□□ -0.19
SCN9A-204ENST00000452182 HSPD1P10809 573 aaKnown RBP13.86□□□□□ -0.19
SCN9A-204ENST00000452182 ALX1Q15699 326 aa13.86□□□□□ -0.19
SCN9A-204ENST00000452182 CDC37L1Q7L3B6 337 aa13.86□□□□□ -0.19
SCN9A-204ENST00000452182 SULF1Q8IWU6 871 aa13.86□□□□□ -0.19
SCN9A-204ENST00000452182 DDRGK1Q96HY6 314 aa13.86□□□□□ -0.19
SCN9A-204ENST00000452182 DSCC1Q9BVC3 393 aa13.86□□□□□ -0.19
SCN9A-204ENST00000452182 NACAP1Q9BZK3 213 aa13.86□□□□□ -0.19
SCN9A-204ENST00000452182 OSBPL5Q9H0X9 879 aaPredicted RBP13.86□□□□□ -0.19
SCN9A-204ENST00000452182 DEFB129Q9H1M3 183 aa13.86□□□□□ -0.19
SCN9A-204ENST00000452182 DHX36Q9H2U1 1008 aaKnown RBP13.86□□□□□ -0.19
SCN9A-204ENST00000452182 CLEC11AQ9Y240 323 aa13.86□□□□□ -0.19
SCN9A-204ENST00000452182 PICALMQ13492 652 aa13.85□□□□□ -0.19
SCN9A-204ENST00000452182 RASA3Q14644 834 aa13.85□□□□□ -0.19
SCN9A-204ENST00000452182 VPS53Q5VIR6 699 aa13.85□□□□□ -0.19
SCN9A-204ENST00000452182 MAPKAPK5Q8IW41 473 aa13.85□□□□□ -0.19
SCN9A-204ENST00000452182 IFNL3Q8IZI9 196 aa13.85□□□□□ -0.19
SCN9A-204ENST00000452182 BAZ2AQ9UIF9 1905 aaKnown RBP13.84□□□□□ -0.19
SCN9A-204ENST00000452182 EPB41L2O43491 1005 aaKnown RBP13.84□□□□□ -0.19
SCN9A-204ENST00000452182 CHADLQ6NUI6 762 aa13.84□□□□□ -0.19
SCN9A-204ENST00000452182 KIAA1211Q6ZU35 1233 aa13.84□□□□□ -0.19
SCN9A-204ENST00000452182 KRT26Q7Z3Y9 468 aa13.84□□□□□ -0.19
SCN9A-204ENST00000452182 EPB41L4AQ9HCS5 686 aaPredicted RBP13.84□□□□□ -0.19
SCN9A-204ENST00000452182 REC8O95072 547 aa13.83□□□□□ -0.2
SCN9A-204ENST00000452182 APPP05067 770 aa13.83□□□□□ -0.2
SCN9A-204ENST00000452182 TCP10Q12799 353 aa13.83□□□□□ -0.2
SCN9A-204ENST00000452182 C8orf34Q49A92 452 aa13.83□□□□□ -0.2
SCN9A-204ENST00000452182 SBK1Q52WX2 424 aa13.83□□□□□ -0.2
SCN9A-204ENST00000452182 MAP4K1Q92918 833 aa13.83□□□□□ -0.2
SCN9A-204ENST00000452182 TEPSINQ96N21 525 aa13.83□□□□□ -0.2
SCN9A-204ENST00000452182 TMEM39BQ9GZU3 492 aa13.83□□□□□ -0.2
SCN9A-204ENST00000452182 ARPP21Q9UBL0 812 aaPredicted RBP13.83□□□□□ -0.2
SCN9A-204ENST00000452182 TAOK2Q9UL54 1235 aa13.83□□□□□ -0.2
SCN9A-204ENST00000452182 LAMB1P07942 1786 aa13.83□□□□□ -0.2
SCN9A-204ENST00000452182 TOMM70O94826 608 aa13.82□□□□□ -0.2
SCN9A-204ENST00000452182 FGAP02671 866 aa13.82□□□□□ -0.2
SCN9A-204ENST00000452182 MAP1SQ66K74 1059 aaPredicted RBP13.82□□□□□ -0.2
SCN9A-204ENST00000452182 SH3BP5LQ7L8J4 393 aa13.82□□□□□ -0.2
SCN9A-204ENST00000452182 ZFPM1Q8IX07 1006 aa13.82□□□□□ -0.2
SCN9A-204ENST00000452182 LSG1Q9H089 658 aaKnown RBP13.82□□□□□ -0.2
SCN9A-204ENST00000452182 NAPBQ9H115 298 aa13.82□□□□□ -0.2
SCN9A-204ENST00000452182 MCM9Q9NXL9 1143 aa13.82□□□□□ -0.2
SCN9A-204ENST00000452182 DDTLA6NHG4 134 aaPredicted RBP13.82□□□□□ -0.2
SCN9A-204ENST00000452182 USP17L12C9JPN9 530 aa13.82□□□□□ -0.2
SCN9A-204ENST00000452182 USP17L21D6R901 530 aa13.82□□□□□ -0.2
SCN9A-204ENST00000452182 TDO2P48775 406 aa13.82□□□□□ -0.2
SCN9A-204ENST00000452182 CTR9Q6PD62 1173 aa13.82□□□□□ -0.2
SCN9A-204ENST00000452182 TTC6Q86TZ1 520 aa13.82□□□□□ -0.2
SCN9A-204ENST00000452182 USP48Q86UV5 1035 aa13.82□□□□□ -0.2
SCN9A-204ENST00000452182 METTL16Q86W50 562 aaKnown RBP13.82□□□□□ -0.2
SCN9A-204ENST00000452182 AMOTL1Q8IY63 956 aa13.82□□□□□ -0.2
SCN9A-204ENST00000452182 RBM46Q8TBY0 533 aaKnown RBP13.82□□□□□ -0.2
SCN9A-204ENST00000452182 HOOK2Q96ED9 719 aa13.82□□□□□ -0.2
SCN9A-204ENST00000452182 GLIS2Q9BZE0 524 aaPredicted RBP13.82□□□□□ -0.2
SCN9A-204ENST00000452182 ANO2Q9NQ90 1003 aa13.82□□□□□ -0.2
SCN9A-204ENST00000452182 PI4KBQ9UBF8 816 aa13.82□□□□□ -0.2
SCN9A-204ENST00000452182 CTNNA3Q9UI47 895 aa13.82□□□□□ -0.2
SCN9A-204ENST00000452182 PALD1Q9ULE6 856 aa13.82□□□□□ -0.2
SCN9A-204ENST00000452182 SCAF8Q9UPN6 1271 aaKnown RBP13.82□□□□□ -0.2
SCN9A-204ENST00000452182 SIPA1L1O43166 1804 aa13.81□□□□□ -0.2
SCN9A-204ENST00000452182 LAMA4Q16363 1823 aa13.81□□□□□ -0.2
SCN9A-204ENST00000452182 ADM5C9JUS6 153 aa13.81□□□□□ -0.2
SCN9A-204ENST00000452182 ECM2O94769 699 aaPredicted RBP13.81□□□□□ -0.2
SCN9A-204ENST00000452182 ITGBL1O95965 494 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms