RNA–Protein interactions for RNA: ENST00000449811.5

CPSF7-207, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-207ENST00000449811 SMCR8Q8TEV9 937 aaPredicted RBP17.2■□□□□ 0.34
CPSF7-207ENST00000449811 DIS3LQ8TF46 1054 aaKnown RBP17.2■□□□□ 0.34
CPSF7-207ENST00000449811 SLC45A1Q9Y2W3 748 aa17.2■□□□□ 0.34
CPSF7-207ENST00000449811 UTYO14607 1347 aa17.2■□□□□ 0.34
CPSF7-207ENST00000449811 AK9Q5TCS8 1911 aa17.19■□□□□ 0.34
CPSF7-207ENST00000449811 PTPRAP18433 802 aa17.19■□□□□ 0.34
CPSF7-207ENST00000449811 FGFR2P21802 821 aa17.19■□□□□ 0.34
CPSF7-207ENST00000449811 WDR63Q8IWG1 891 aa17.19■□□□□ 0.34
CPSF7-207ENST00000449811 ANKRD44Q8N8A2 993 aa17.19■□□□□ 0.34
CPSF7-207ENST00000449811 KLHDC4Q8TBB5 520 aa17.19■□□□□ 0.34
CPSF7-207ENST00000449811 SPINK5Q9NQ38 1064 aaPredicted RBP17.19■□□□□ 0.34
CPSF7-207ENST00000449811 USP40Q9NVE5 1235 aa17.19■□□□□ 0.34
CPSF7-207ENST00000449811 PHF20L1A8MW92 1017 aa17.18■□□□□ 0.34
CPSF7-207ENST00000449811 CCDC184Q52MB2 194 aa17.18■□□□□ 0.34
CPSF7-207ENST00000449811 Q7L0L9 218 aa17.18■□□□□ 0.34
CPSF7-207ENST00000449811 ZFPM1Q8IX07 1006 aa17.18■□□□□ 0.34
CPSF7-207ENST00000449811 COA7Q96BR5 231 aa17.18■□□□□ 0.34
CPSF7-207ENST00000449811 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.18■□□□□ 0.343e-8■■■□□ 15.8
CPSF7-207ENST00000449811 ZMYND8Q9ULU4 1186 aaPredicted RBP17.18■□□□□ 0.34
CPSF7-207ENST00000449811 STXBP5LQ9Y2K9 1186 aa17.18■□□□□ 0.34
CPSF7-207ENST00000449811 AFG3L2Q9Y4W6 797 aa17.18■□□□□ 0.34
CPSF7-207ENST00000449811 ATRNL1Q5VV63 1379 aa17.17■□□□□ 0.34
CPSF7-207ENST00000449811 SLC5A1P13866 664 aa17.17■□□□□ 0.34
CPSF7-207ENST00000449811 PRDX5P30044 214 aa17.17■□□□□ 0.34
CPSF7-207ENST00000449811 ANKRD13CQ8N6S4 541 aa17.17■□□□□ 0.34
CPSF7-207ENST00000449811 ANKLE1Q8NAG6 615 aa17.17■□□□□ 0.34
CPSF7-207ENST00000449811 SALL2Q9Y467 1007 aaPredicted RBP17.17■□□□□ 0.34
CPSF7-207ENST00000449811 UNC80Q8N2C7 3258 aa17.17■□□□□ 0.34
CPSF7-207ENST00000449811 ALPK3Q96L96 1907 aa17.17■□□□□ 0.34
CPSF7-207ENST00000449811 TRIM75PA6NK02 468 aa17.16■□□□□ 0.34
CPSF7-207ENST00000449811 LRIT3Q3SXY7 679 aa17.16■□□□□ 0.34
CPSF7-207ENST00000449811 LRRFIP2Q9Y608 721 aaKnown RBP17.16■□□□□ 0.34
CPSF7-207ENST00000449811 LDHBP07195 334 aaKnown RBP17.15■□□□□ 0.34
CPSF7-207ENST00000449811 LPIN2Q92539 896 aa17.15■□□□□ 0.34
CPSF7-207ENST00000449811 AGTPBP1Q9UPW5 1226 aa17.15■□□□□ 0.34
CPSF7-207ENST00000449811 CUL9Q8IWT3 2517 aa17.14■□□□□ 0.33
CPSF7-207ENST00000449811 MYH13Q9UKX3 1938 aa17.14■□□□□ 0.33
CPSF7-207ENST00000449811 ENTPD3O75355 529 aa17.14■□□□□ 0.33
CPSF7-207ENST00000449811 HMGCRP04035 888 aa17.14■□□□□ 0.33
CPSF7-207ENST00000449811 SYN1P17600 705 aa17.14■□□□□ 0.33
CPSF7-207ENST00000449811 MAGEA10P43363 369 aaPredicted RBP17.14■□□□□ 0.33
CPSF7-207ENST00000449811 RGS3P49796 1198 aa17.14■□□□□ 0.33
CPSF7-207ENST00000449811 FAM110CQ1W6H9 321 aa17.14■□□□□ 0.33
CPSF7-207ENST00000449811 ZSCAN29Q8IWY8 852 aaPredicted RBP17.14■□□□□ 0.33
CPSF7-207ENST00000449811 TDHQ8IZJ6 230 aa17.14■□□□□ 0.33
CPSF7-207ENST00000449811 NBPF3Q9H094 633 aa17.14■□□□□ 0.33
CPSF7-207ENST00000449811 MTMR10Q9NXD2 777 aa17.14■□□□□ 0.33
CPSF7-207ENST00000449811 PNMA3Q9UL41 463 aa17.14■□□□□ 0.33
CPSF7-207ENST00000449811 DOCK2Q92608 1830 aa17.13■□□□□ 0.33
CPSF7-207ENST00000449811 CTNND1O60716 968 aaKnown RBP17.13■□□□□ 0.33
CPSF7-207ENST00000449811 IDI2Q9BXS1 227 aa17.13■□□□□ 0.33
CPSF7-207ENST00000449811 C11orf49Q9H6J7 331 aa17.13■□□□□ 0.33
CPSF7-207ENST00000449811 EYA2O00167 538 aa17.12■□□□□ 0.33
CPSF7-207ENST00000449811 MAP3K10Q02779 954 aa17.12■□□□□ 0.33
CPSF7-207ENST00000449811 TREML2Q5T2D2 321 aa17.12■□□□□ 0.33
CPSF7-207ENST00000449811 SH3BP5LQ7L8J4 393 aa17.12■□□□□ 0.33
CPSF7-207ENST00000449811 HMX1Q9NP08 348 aaPredicted RBP17.12■□□□□ 0.33
CPSF7-207ENST00000449811 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.12■□□□□ 0.33
CPSF7-207ENST00000449811 RPTORQ8N122 1335 aa17.12■□□□□ 0.33
CPSF7-207ENST00000449811 PTPRFP10586 1907 aa17.11■□□□□ 0.33
CPSF7-207ENST00000449811 DDTLA6NHG4 134 aaPredicted RBP17.11■□□□□ 0.33
CPSF7-207ENST00000449811 SLURP2P0DP57 97 aa17.11■□□□□ 0.33
CPSF7-207ENST00000449811 CCDC84Q86UT8 332 aaPredicted RBP17.11■□□□□ 0.33
CPSF7-207ENST00000449811 UBE2OQ9C0C9 1292 aaKnown RBP17.11■□□□□ 0.33
CPSF7-207ENST00000449811 GNL3LQ9NVN8 582 aaKnown RBP17.11■□□□□ 0.33
CPSF7-207ENST00000449811 SALL1Q9NSC2 1324 aa17.11■□□□□ 0.33
CPSF7-207ENST00000449811 RFX7Q2KHR2 1363 aa17.11■□□□□ 0.33
CPSF7-207ENST00000449811 DOCK1Q14185 1865 aa17.1■□□□□ 0.33
CPSF7-207ENST00000449811 TRIM32Q13049 653 aa17.1■□□□□ 0.33
CPSF7-207ENST00000449811 PROCA1Q8NCQ7 364 aaPredicted RBP17.1■□□□□ 0.33
CPSF7-207ENST00000449811 COL25A1Q9BXS0 654 aaPredicted RBP17.1■□□□□ 0.33
CPSF7-207ENST00000449811 DENND2AQ9ULE3 1009 aa17.1■□□□□ 0.33
CPSF7-207ENST00000449811 DOCK3Q8IZD9 2030 aa17.09■□□□□ 0.33
CPSF7-207ENST00000449811 RFX5P48382 616 aaPredicted RBP17.09■□□□□ 0.33
CPSF7-207ENST00000449811 GCLCP48506 637 aaPredicted RBP17.09■□□□□ 0.33
CPSF7-207ENST00000449811 GJD2Q9UKL4 321 aa17.09■□□□□ 0.33
CPSF7-207ENST00000449811 OGDHLQ9ULD0 1010 aa17.09■□□□□ 0.33
CPSF7-207ENST00000449811 GAKO14976 1311 aa17.09■□□□□ 0.33
CPSF7-207ENST00000449811 DDX60LQ5H9U9 1706 aaKnown RBP17.09■□□□□ 0.33
CPSF7-207ENST00000449811 PHIPQ8WWQ0 1821 aa17.09■□□□□ 0.33
CPSF7-207ENST00000449811 PICALMQ13492 652 aa17.08■□□□□ 0.32
CPSF7-207ENST00000449811 ATP2B3Q16720 1220 aa17.08■□□□□ 0.32
CPSF7-207ENST00000449811 ATG9AQ7Z3C6 839 aa17.08■□□□□ 0.32
CPSF7-207ENST00000449811 DZIP1Q86YF9 867 aaKnown RBP17.08■□□□□ 0.32
CPSF7-207ENST00000449811 ZGPATQ8N5A5 531 aaKnown RBP17.08■□□□□ 0.32
CPSF7-207ENST00000449811 DDX4Q9NQI0 724 aaKnown RBP17.08■□□□□ 0.32
CPSF7-207ENST00000449811 PFASO15067 1338 aa17.07■□□□□ 0.32
CPSF7-207ENST00000449811 SEMA3EO15041 775 aa17.07■□□□□ 0.32
CPSF7-207ENST00000449811 PABPC4Q13310 644 aaKnown RBP eCLIP17.07■□□□□ 0.32
CPSF7-207ENST00000449811 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.07■□□□□ 0.32
CPSF7-207ENST00000449811 USP44Q9H0E7 712 aa17.07■□□□□ 0.32
CPSF7-207ENST00000449811 PHKA1P46020 1223 aa17.06■□□□□ 0.32
CPSF7-207ENST00000449811 SPP2Q13103 211 aa17.06■□□□□ 0.32
CPSF7-207ENST00000449811 SLF2Q8IX21 1173 aa17.06■□□□□ 0.32
CPSF7-207ENST00000449811 TRIB2Q92519 343 aa17.06■□□□□ 0.32
CPSF7-207ENST00000449811 TBC1D12O60347 775 aa17.05■□□□□ 0.32
CPSF7-207ENST00000449811 PRKAR2AP13861 404 aaKnown RBP17.05■□□□□ 0.32
CPSF7-207ENST00000449811 CYP2B6P20813 491 aa17.05■□□□□ 0.32
CPSF7-207ENST00000449811 BTDP43251 543 aa17.05■□□□□ 0.32
CPSF7-207ENST00000449811 HMGCS2P54868 508 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms