RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 SLC8A3P57103 927 aa11.46□□□□□ -0.58
SCN10A-201ENST00000449082 CCDC24Q8N4L8 307 aa11.46□□□□□ -0.58
SCN10A-201ENST00000449082 PRIMPOLQ96LW4 560 aa11.46□□□□□ -0.58
SCN10A-201ENST00000449082 ABCA5Q8WWZ7 1642 aa11.46□□□□□ -0.58
SCN10A-201ENST00000449082 CALUO43852 315 aaPredicted RBP11.46□□□□□ -0.58
SCN10A-201ENST00000449082 RPS8P62241 208 aaKnown RBP11.46□□□□□ -0.58
SCN10A-201ENST00000449082 KRT25Q7Z3Z0 450 aa11.46□□□□□ -0.58
SCN10A-201ENST00000449082 BEGAINQ9BUH8 593 aa11.46□□□□□ -0.58
SCN10A-201ENST00000449082 ARHGEF35A5YM69 484 aa11.45□□□□□ -0.58
SCN10A-201ENST00000449082 RAPGEF1Q13905 1077 aa11.45□□□□□ -0.58
SCN10A-201ENST00000449082 CDAN1Q8IWY9 1227 aa11.45□□□□□ -0.58
SCN10A-201ENST00000449082 STMN4Q9H169 189 aaPredicted RBP11.45□□□□□ -0.58
SCN10A-201ENST00000449082 TRIM35Q9UPQ4 493 aa11.45□□□□□ -0.58
SCN10A-201ENST00000449082 ATP6V0A2Q9Y487 856 aa11.45□□□□□ -0.58
SCN10A-201ENST00000449082 HARSP12081 509 aaKnown RBP11.45□□□□□ -0.58
SCN10A-201ENST00000449082 PDE4DQ08499 809 aa11.45□□□□□ -0.58
SCN10A-201ENST00000449082 TCP10Q12799 353 aa11.45□□□□□ -0.58
SCN10A-201ENST00000449082 PRDM1O75626 825 aa11.45□□□□□ -0.58
SCN10A-201ENST00000449082 CTSWP56202 376 aa11.45□□□□□ -0.58
SCN10A-201ENST00000449082 C6orf163Q5TEZ5 329 aa11.45□□□□□ -0.58
SCN10A-201ENST00000449082 ZNF532Q9HCE3 1301 aa11.45□□□□□ -0.58
SCN10A-201ENST00000449082 CEP170Q5SW79 1584 aa11.45□□□□□ -0.58
SCN10A-201ENST00000449082 STX10O60499 249 aa11.45□□□□□ -0.58
SCN10A-201ENST00000449082 ARL1P40616 181 aaPredicted RBP11.45□□□□□ -0.58
SCN10A-201ENST00000449082 TGFBRAP1Q8WUH2 860 aa11.45□□□□□ -0.58
SCN10A-201ENST00000449082 KRT5P13647 590 aa11.45□□□□□ -0.58
SCN10A-201ENST00000449082 MAPKAPK5Q8IW41 473 aa11.45□□□□□ -0.58
SCN10A-201ENST00000449082 TSGA10Q9BZW7 698 aa11.45□□□□□ -0.58
SCN10A-201ENST00000449082 CBX1P83916 185 aa11.44□□□□□ -0.58
SCN10A-201ENST00000449082 CTDSPL2Q05D32 466 aa11.44□□□□□ -0.58
SCN10A-201ENST00000449082 NONOQ15233 471 aaKnown RBP eCLIP11.44□□□□□ -0.58
SCN10A-201ENST00000449082 ANO1Q5XXA6 986 aa11.44□□□□□ -0.58
SCN10A-201ENST00000449082 SRRTQ9BXP5 876 aaKnown RBP11.44□□□□□ -0.58
SCN10A-201ENST00000449082 MAK16Q9BXY0 300 aaKnown RBP11.44□□□□□ -0.58
SCN10A-201ENST00000449082 AZI2Q9H6S1 392 aa11.44□□□□□ -0.58
SCN10A-201ENST00000449082 TXKP42681 527 aa11.44□□□□□ -0.58
SCN10A-201ENST00000449082 ZAP70P43403 619 aa11.44□□□□□ -0.58
SCN10A-201ENST00000449082 FAM160A1Q05DH4 1040 aa11.44□□□□□ -0.58
SCN10A-201ENST00000449082 TNFAIP1Q13829 316 aa11.44□□□□□ -0.58
SCN10A-201ENST00000449082 RNF216Q9NWF9 866 aaPredicted RBP11.44□□□□□ -0.58
SCN10A-201ENST00000449082 VWA3BQ502W6 1294 aa11.44□□□□□ -0.58
SCN10A-201ENST00000449082 CNGA4Q8IV77 575 aa11.44□□□□□ -0.58
SCN10A-201ENST00000449082 NEURL1BA8MQ27 555 aa11.44□□□□□ -0.58
SCN10A-201ENST00000449082 PHKG2P15735 406 aa11.44□□□□□ -0.58
SCN10A-201ENST00000449082 IRX3P78415 501 aaPredicted RBP11.44□□□□□ -0.58
SCN10A-201ENST00000449082 PRKG1Q13976 671 aa11.44□□□□□ -0.58
SCN10A-201ENST00000449082 NCAPH2Q6IBW4 605 aa11.44□□□□□ -0.58
SCN10A-201ENST00000449082 TEKT1Q969V4 418 aa11.44□□□□□ -0.58
SCN10A-201ENST00000449082 FAM227BQ96M60 508 aa11.44□□□□□ -0.58
SCN10A-201ENST00000449082 NOC4LQ9BVI4 516 aaKnown RBP11.44□□□□□ -0.58
SCN10A-201ENST00000449082 IFNKQ9P0W0 207 aa11.44□□□□□ -0.58
SCN10A-201ENST00000449082 A0A1B0GVL5 298 aa11.44□□□□□ -0.58
SCN10A-201ENST00000449082 CPA1P15085 419 aa11.44□□□□□ -0.58
SCN10A-201ENST00000449082 MYL5Q02045 173 aa11.44□□□□□ -0.58
SCN10A-201ENST00000449082 TRPC3Q13507 836 aa11.44□□□□□ -0.58
SCN10A-201ENST00000449082 TTC38Q5R3I4 469 aa11.44□□□□□ -0.58
SCN10A-201ENST00000449082 CEP63Q96MT8 703 aa11.44□□□□□ -0.58
SCN10A-201ENST00000449082 AS3MTQ9HBK9 375 aa11.44□□□□□ -0.58
SCN10A-201ENST00000449082 ARPP21Q9UBL0 812 aaPredicted RBP11.44□□□□□ -0.58
SCN10A-201ENST00000449082 CTNND2Q9UQB3 1225 aa11.44□□□□□ -0.58
SCN10A-201ENST00000449082 KIAA0232Q92628 1395 aa11.43□□□□□ -0.58
SCN10A-201ENST00000449082 CPXCR1Q8N123 301 aa11.43□□□□□ -0.58
SCN10A-201ENST00000449082 KIAA1524Q8TCG1 905 aa11.43□□□□□ -0.58
SCN10A-201ENST00000449082 USP40Q9NVE5 1235 aa11.43□□□□□ -0.58
SCN10A-201ENST00000449082 SNX14Q9Y5W7 946 aa11.43□□□□□ -0.58
SCN10A-201ENST00000449082 TUBB4BP68371 445 aa11.43□□□□□ -0.58
SCN10A-201ENST00000449082 PLCD3Q8N3E9 789 aa11.43□□□□□ -0.58
SCN10A-201ENST00000449082 NSRP1Q9H0G5 558 aaKnown RBP11.43□□□□□ -0.58
SCN10A-201ENST00000449082 ATP2A2P16615 1042 aaKnown RBP11.43□□□□□ -0.58
SCN10A-201ENST00000449082 ATP2B4P23634 1241 aa11.43□□□□□ -0.58
SCN10A-201ENST00000449082 CCDC14Q49A88 953 aa11.43□□□□□ -0.58
SCN10A-201ENST00000449082 MTUS1Q9ULD2 1270 aa11.43□□□□□ -0.58
SCN10A-201ENST00000449082 GUCA1BQ9UMX6 200 aa11.43□□□□□ -0.58
SCN10A-201ENST00000449082 ZNF830Q96NB3 372 aaPredicted RBP11.43□□□□□ -0.58
SCN10A-201ENST00000449082 TRIM6Q9C030 488 aaPredicted RBP11.43□□□□□ -0.58
SCN10A-201ENST00000449082 SGSM2O43147 1006 aa11.43□□□□□ -0.58
SCN10A-201ENST00000449082 GTF2IP78347 998 aa11.43□□□□□ -0.58
SCN10A-201ENST00000449082 DIS3L2Q8IYB7 885 aaKnown RBP11.43□□□□□ -0.58
SCN10A-201ENST00000449082 OPA1O60313 960 aa11.42□□□□□ -0.58
SCN10A-201ENST00000449082 CUTAO60888 179 aa11.42□□□□□ -0.58
SCN10A-201ENST00000449082 DNM2P50570 870 aa11.42□□□□□ -0.58
SCN10A-201ENST00000449082 NOLC1Q14978 699 aaKnown RBP eCLIP11.42□□□□□ -0.58
SCN10A-201ENST00000449082 USH1GQ495M9 461 aa11.42□□□□□ -0.58
SCN10A-201ENST00000449082 NSMFQ6X4W1 530 aa11.42□□□□□ -0.58
SCN10A-201ENST00000449082 TXNDC16Q9P2K2 825 aa11.42□□□□□ -0.58
SCN10A-201ENST00000449082 TTF2Q9UNY4 1162 aaKnown RBP11.42□□□□□ -0.58
SCN10A-201ENST00000449082 CSADQ9Y600 493 aa11.42□□□□□ -0.58
SCN10A-201ENST00000449082 SNX16P57768 344 aa11.42□□□□□ -0.58
SCN10A-201ENST00000449082 PAIP2Q9BPZ3 127 aaKnown RBP11.42□□□□□ -0.58
SCN10A-201ENST00000449082 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.42□□□□□ -0.58
SCN10A-201ENST00000449082 ARFGAP3Q9NP61 516 aa11.42□□□□□ -0.58
SCN10A-201ENST00000449082 KCNH3Q9ULD8 1083 aa11.42□□□□□ -0.58
SCN10A-201ENST00000449082 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.42□□□□□ -0.58
SCN10A-201ENST00000449082 NDC80O14777 642 aa11.42□□□□□ -0.58
SCN10A-201ENST00000449082 DNM3Q9UQ16 869 aa11.42□□□□□ -0.58
SCN10A-201ENST00000449082 PNMA6EA0A0J9YXQ4 647 aa11.42□□□□□ -0.58
SCN10A-201ENST00000449082 CETN3O15182 167 aa11.42□□□□□ -0.58
SCN10A-201ENST00000449082 TFAP4Q01664 338 aa11.42□□□□□ -0.58
SCN10A-201ENST00000449082 MFSD14BQ5SR56 506 aa11.42□□□□□ -0.58
SCN10A-201ENST00000449082 SEL1L2Q5TEA6 688 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms