RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 IRF6O14896 467 aa24.15■■□□□ 1.46
VCP-203ENST00000448530 MAP4K4O95819 1239 aaPredicted RBP24.15■■□□□ 1.46
VCP-203ENST00000448530 FBXO46Q6PJ61 603 aaPredicted RBP24.15■■□□□ 1.46
VCP-203ENST00000448530 ERC1Q8IUD2 1116 aa24.15■■□□□ 1.46
VCP-203ENST00000448530 RCAN3Q9UKA8 241 aa24.15■■□□□ 1.46
VCP-203ENST00000448530 MLLT1Q03111 559 aaPredicted RBP24.14■■□□□ 1.45
VCP-203ENST00000448530 DDX19BQ9UMR2 479 aa24.14■■□□□ 1.45
VCP-203ENST00000448530 RFX7Q2KHR2 1363 aa24.14■■□□□ 1.45
VCP-203ENST00000448530 RGS19P49795 217 aa24.13■■□□□ 1.45
VCP-203ENST00000448530 SP3Q02447 781 aa24.13■■□□□ 1.45
VCP-203ENST00000448530 HSP90AB4PQ58FF6 505 aa24.13■■□□□ 1.45
VCP-203ENST00000448530 FAM43AQ8N2R8 423 aa24.13■■□□□ 1.45
VCP-203ENST00000448530 ZNF384Q8TF68 577 aa24.13■■□□□ 1.45
VCP-203ENST00000448530 CHMP4BQ9H444 224 aaKnown RBP24.13■■□□□ 1.45
VCP-203ENST00000448530 TRIM17Q9Y577 477 aa24.13■■□□□ 1.45
VCP-203ENST00000448530 RHBDL3P58872 404 aa24.12■■□□□ 1.45
VCP-203ENST00000448530 NOL9Q5SY16 702 aaKnown RBP24.12■■□□□ 1.45
VCP-203ENST00000448530 NAA16Q6N069 864 aaPredicted RBP24.12■■□□□ 1.45
VCP-203ENST00000448530 ZNF512BQ96KM6 892 aaPredicted RBP24.12■■□□□ 1.45
VCP-203ENST00000448530 CCDC8Q9H0W5 538 aaPredicted RBP24.12■■□□□ 1.45
VCP-203ENST00000448530 ZCCHC17Q9NP64 241 aaKnown RBP24.12■■□□□ 1.45
VCP-203ENST00000448530 DDX4Q9NQI0 724 aaKnown RBP24.12■■□□□ 1.45
VCP-203ENST00000448530 PICK1Q9NRD5 415 aa24.12■■□□□ 1.45
VCP-203ENST00000448530 EXOC6BQ9Y2D4 811 aa24.12■■□□□ 1.45
VCP-203ENST00000448530 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.11■■□□□ 1.45
VCP-203ENST00000448530 CD99L2Q8TCZ2 262 aa24.11■■□□□ 1.45
VCP-203ENST00000448530 DBNLQ9UJU6 430 aaKnown RBP24.11■■□□□ 1.45
VCP-203ENST00000448530 COG6Q9Y2V7 657 aa24.11■■□□□ 1.45
VCP-203ENST00000448530 DDTLA6NHG4 134 aaPredicted RBP24.1■■□□□ 1.45
VCP-203ENST00000448530 BTBD19C9JJ37 291 aa24.1■■□□□ 1.45
VCP-203ENST00000448530 NPM3O75607 178 aaKnown RBP24.1■■□□□ 1.45
VCP-203ENST00000448530 BAG3O95817 575 aa24.1■■□□□ 1.45
VCP-203ENST00000448530 SOX10P56693 466 aa24.1■■□□□ 1.45
VCP-203ENST00000448530 ARHGEF6Q15052 776 aa24.1■■□□□ 1.45
VCP-203ENST00000448530 SH3BP5LQ7L8J4 393 aa24.1■■□□□ 1.45
VCP-203ENST00000448530 OTOP1Q7RTM1 612 aa24.1■■□□□ 1.45
VCP-203ENST00000448530 TEX11Q8IYF3 940 aa24.1■■□□□ 1.45
VCP-203ENST00000448530 EAF2Q96CJ1 260 aaPredicted RBP24.1■■□□□ 1.45
VCP-203ENST00000448530 MAST2Q6P0Q8 1798 aa24.1■■□□□ 1.45
VCP-203ENST00000448530 ATRNL1Q5VV63 1379 aa24.09■■□□□ 1.45
VCP-203ENST00000448530 HMMRO75330 724 aa24.09■■□□□ 1.45
VCP-203ENST00000448530 PLCG2P16885 1265 aa24.09■■□□□ 1.45
VCP-203ENST00000448530 RPAP2Q8IXW5 612 aaPredicted RBP24.09■■□□□ 1.45
VCP-203ENST00000448530 SCYL3Q8IZE3 742 aa24.09■■□□□ 1.45
VCP-203ENST00000448530 EFCC1Q9HA90 598 aa24.09■■□□□ 1.45
VCP-203ENST00000448530 TLR7Q9NYK1 1049 aaKnown RBP24.09■■□□□ 1.45
VCP-203ENST00000448530 PHF20L1A8MW92 1017 aa24.08■■□□□ 1.45
VCP-203ENST00000448530 IGSF3O75054 1194 aa24.08■■□□□ 1.45
VCP-203ENST00000448530 CYP2E1P05181 493 aaPredicted RBP24.08■■□□□ 1.45
VCP-203ENST00000448530 ZAP70P43403 619 aa24.08■■□□□ 1.45
VCP-203ENST00000448530 AACSQ86V21 672 aa24.08■■□□□ 1.45
VCP-203ENST00000448530 KCNH4Q9UQ05 1017 aa24.08■■□□□ 1.45
VCP-203ENST00000448530 MAP3K10Q02779 954 aa24.07■■□□□ 1.44
VCP-203ENST00000448530 CXCL11O14625 94 aa24.06■■□□□ 1.44
VCP-203ENST00000448530 CTNND1O60716 968 aaKnown RBP24.06■■□□□ 1.44
VCP-203ENST00000448530 ANKRD23Q86SG2 305 aa24.06■■□□□ 1.44
VCP-203ENST00000448530 SH3RF3Q8TEJ3 882 aaPredicted RBP24.06■■□□□ 1.44
VCP-203ENST00000448530 OSBPL5Q9H0X9 879 aaPredicted RBP24.06■■□□□ 1.44
VCP-203ENST00000448530 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.06■■□□□ 1.44
VCP-203ENST00000448530 ZBTB40Q9NUA8 1239 aa24.06■■□□□ 1.44
VCP-203ENST00000448530 AATFQ9NY61 560 aaKnown RBP eCLIP24.06■■□□□ 1.44
VCP-203ENST00000448530 ZHX2Q9Y6X8 837 aa24.06■■□□□ 1.44
VCP-203ENST00000448530 DOCK1Q14185 1865 aa24.05■■□□□ 1.44
VCP-203ENST00000448530 MYO5AQ9Y4I1 1855 aaKnown RBP24.05■■□□□ 1.44
VCP-203ENST00000448530 TBC1D12O60347 775 aa24.05■■□□□ 1.44
VCP-203ENST00000448530 TLR2O60603 784 aa24.05■■□□□ 1.44
VCP-203ENST00000448530 KIF22Q14807 665 aa24.05■■□□□ 1.44
VCP-203ENST00000448530 COL2A1P02458 1487 aaPredicted RBP24.05■■□□□ 1.44
VCP-203ENST00000448530 APBB1O00213 710 aa24.04■■□□□ 1.44
VCP-203ENST00000448530 IDH1O75874 414 aaKnown RBP24.04■■□□□ 1.44
VCP-203ENST00000448530 PTPRAP18433 802 aa24.04■■□□□ 1.44
VCP-203ENST00000448530 CLASRPQ8N2M8 674 aaKnown RBP24.04■■□□□ 1.44
VCP-203ENST00000448530 RHPN1Q8TCX5 695 aa24.04■■□□□ 1.44
VCP-203ENST00000448530 IL1RAPL2Q9NP60 686 aa24.04■■□□□ 1.44
VCP-203ENST00000448530 PIH1D3Q9NQM4 214 aaKnown RBP24.04■■□□□ 1.44
VCP-203ENST00000448530 PTPN22Q9Y2R2 807 aa24.04■■□□□ 1.44
VCP-203ENST00000448530 PDHXO00330 501 aa24.03■■□□□ 1.44
VCP-203ENST00000448530 PPP4CP60510 307 aa24.03■■□□□ 1.44
VCP-203ENST00000448530 KIF1BPQ96EK5 621 aa24.03■■□□□ 1.44
VCP-203ENST00000448530 CYP7A1P22680 504 aa24.02■■□□□ 1.44
VCP-203ENST00000448530 FASTKD5Q7L8L6 764 aaKnown RBP24.02■■□□□ 1.44
VCP-203ENST00000448530 DHX36Q9H2U1 1008 aaKnown RBP24.02■■□□□ 1.44
VCP-203ENST00000448530 SLURP2P0DP57 97 aa24.01■■□□□ 1.43
VCP-203ENST00000448530 PDE3AQ14432 1141 aa24.01■■□□□ 1.43
VCP-203ENST00000448530 TGFBRAP1Q8WUH2 860 aa24.01■■□□□ 1.43
VCP-203ENST00000448530 BCL11AQ9H165 835 aa24.01■■□□□ 1.43
VCP-203ENST00000448530 FAM196BA6NMK8 535 aa24■■□□□ 1.43
VCP-203ENST00000448530 RAB11FIP3O75154 756 aa24■■□□□ 1.43
VCP-203ENST00000448530 IFIT2P09913 472 aaKnown RBP24■■□□□ 1.43
VCP-203ENST00000448530 MAP3K12Q12852 859 aa24■■□□□ 1.43
VCP-203ENST00000448530 GADL1Q6ZQY3 521 aa24■■□□□ 1.43
VCP-203ENST00000448530 ADGRA1Q86SQ6 560 aa24■■□□□ 1.43
VCP-203ENST00000448530 MAPKAPK5Q8IW41 473 aa24■■□□□ 1.43
VCP-203ENST00000448530 PARK7Q99497 189 aaKnown RBP24■■□□□ 1.43
VCP-203ENST00000448530 TRIM34Q9BYJ4 488 aa24■■□□□ 1.43
VCP-203ENST00000448530 PI4KBQ9UBF8 816 aa24■■□□□ 1.43
VCP-203ENST00000448530 HERC5Q9UII4 1024 aaKnown RBP24■■□□□ 1.43
VCP-203ENST00000448530 AFG3L2Q9Y4W6 797 aa24■■□□□ 1.43
VCP-203ENST00000448530 CDK5RAP2Q96SN8 1893 aa23.99■■□□□ 1.43
VCP-203ENST00000448530 LACTBP83111 547 aaPredicted RBP23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms