RNA–Protein interactions for RNA: ENST00000448340.5

HLCS-205, Transcript of holocarboxylase synthetase, humanhuman

TSL 1 (best)

Gene HLCS, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-205ENST00000448340 ADGRA1Q86SQ6 560 aa21.34■■□□□ 1.01
HLCS-205ENST00000448340 TICAM2Q86XR7 235 aa21.34■■□□□ 1.01
HLCS-205ENST00000448340 NOL10Q9BSC4 688 aaKnown RBP21.34■■□□□ 1.01
HLCS-205ENST00000448340 FSD1Q9BTV5 496 aa21.34■■□□□ 1.01
HLCS-205ENST00000448340 ZNF532Q9HCE3 1301 aa21.33■■□□□ 1.01
HLCS-205ENST00000448340 TCRBV5S4A2TA0A5A2 114 aa21.33■■□□□ 1.01
HLCS-205ENST00000448340 CLRN2A0PK11 232 aa21.33■■□□□ 1.01
HLCS-205ENST00000448340 TRIM6-TRIM34B2RNG4 842 aa21.33■■□□□ 1.01
HLCS-205ENST00000448340 ZFYP08048 801 aaPredicted RBP21.33■■□□□ 1.01
HLCS-205ENST00000448340 PPP4CP60510 307 aa21.33■■□□□ 1.01
HLCS-205ENST00000448340 CDC42EP5Q6NZY7 148 aa21.33■■□□□ 1.01
HLCS-205ENST00000448340 MOB2Q70IA6 237 aa21.33■■□□□ 1.01
HLCS-205ENST00000448340 APOBEC3FQ8IUX4 373 aaKnown RBP21.33■■□□□ 1.01
HLCS-205ENST00000448340 USP40Q9NVE5 1235 aa21.33■■□□□ 1.01
HLCS-205ENST00000448340 TMOD2Q9NZR1 351 aa21.33■■□□□ 1.01
HLCS-205ENST00000448340 CERS3Q8IU89 383 aa21.32■■□□□ 1
HLCS-205ENST00000448340 VEZTQ9HBM0 779 aa21.32■■□□□ 1
HLCS-205ENST00000448340 HPS5Q9UPZ3 1129 aa21.32■■□□□ 1
HLCS-205ENST00000448340 RNF113AO15541 343 aaKnown RBP21.31■■□□□ 1
HLCS-205ENST00000448340 PLCG2P16885 1265 aa21.31■■□□□ 1
HLCS-205ENST00000448340 TNFAIP1Q13829 316 aa21.31■■□□□ 1
HLCS-205ENST00000448340 FKBP1CQ5VVH2 108 aa21.31■■□□□ 1
HLCS-205ENST00000448340 RILPL2Q969X0 211 aa21.31■■□□□ 1
HLCS-205ENST00000448340 AATFQ9NY61 560 aaKnown RBP eCLIP21.31■■□□□ 1
HLCS-205ENST00000448340 SCAF8Q9UPN6 1271 aaKnown RBP21.31■■□□□ 1
HLCS-205ENST00000448340 GSPT1P15170 499 aaKnown RBP21.3■■□□□ 1
HLCS-205ENST00000448340 RHBDL3P58872 404 aa21.3■■□□□ 1
HLCS-205ENST00000448340 SKAP1Q86WV1 359 aa21.3■■□□□ 1
HLCS-205ENST00000448340 ZNF296Q8WUU4 475 aaPredicted RBP21.3■■□□□ 1
HLCS-205ENST00000448340 PAPPA2Q9BXP8 1791 aa21.29■■□□□ 1
HLCS-205ENST00000448340 RFX7Q2KHR2 1363 aa21.29■■□□□ 1
HLCS-205ENST00000448340 UBE2Q2LH0YL09 131 aa21.29■■□□□ 1
HLCS-205ENST00000448340 TM4SF4P48230 202 aa21.29■■□□□ 1
HLCS-205ENST00000448340 TNNI2P48788 182 aa21.29■■□□□ 1
HLCS-205ENST00000448340 RGS3P49796 1198 aa21.29■■□□□ 1
HLCS-205ENST00000448340 PRAMEF18Q5VWM3 479 aa21.29■■□□□ 1
HLCS-205ENST00000448340 MIGA1Q8NAN2 632 aa21.29■■□□□ 1
HLCS-205ENST00000448340 AK9Q5TCS8 1911 aa21.28■■□□□ 1
HLCS-205ENST00000448340 MAGEB6P1A0A0J9YX57 407 aa21.28■■□□□ 1
HLCS-205ENST00000448340 TBC1D8O95759 1140 aa21.28■■□□□ 1
HLCS-205ENST00000448340 CHGBP05060 677 aa21.28■■□□□ 1
HLCS-205ENST00000448340 CACNB3P54284 484 aa21.28■■□□□ 1
HLCS-205ENST00000448340 PKN2Q16513 984 aaKnown RBP21.28■■□□□ 1
HLCS-205ENST00000448340 SLFNL1Q499Z3 407 aa21.28■■□□□ 1
HLCS-205ENST00000448340 NOM1Q5C9Z4 860 aaKnown RBP21.28■■□□□ 1
HLCS-205ENST00000448340 PRPF38BQ5VTL8 546 aaKnown RBP21.28■■□□□ 1
HLCS-205ENST00000448340 FAM83AQ86UY5 434 aa21.28■■□□□ 1
HLCS-205ENST00000448340 APPBP2Q92624 585 aa21.28■■□□□ 1
HLCS-205ENST00000448340 RIOK1Q9BRS2 568 aaKnown RBP21.28■■□□□ 1
HLCS-205ENST00000448340 IDI2Q9BXS1 227 aa21.28■■□□□ 1
HLCS-205ENST00000448340 DEFB129Q9H1M3 183 aa21.28■■□□□ 1
HLCS-205ENST00000448340 PPP2R3BQ9Y5P8 575 aa21.28■■□□□ 1
HLCS-205ENST00000448340 TCP10L2B9ZVM9 353 aa21.27■■□□□ 1
HLCS-205ENST00000448340 NPM3O75607 178 aaKnown RBP21.27■■□□□ 1
HLCS-205ENST00000448340 WDHD1O75717 1129 aaPredicted RBP21.27■■□□□ 1
HLCS-205ENST00000448340 SDSP20132 328 aa21.27■■□□□ 1
HLCS-205ENST00000448340 DYNLL1P63167 89 aaKnown RBP21.27■■□□□ 1
HLCS-205ENST00000448340 SH3RF3Q8TEJ3 882 aaPredicted RBP21.27■■□□□ 1
HLCS-205ENST00000448340 NFIAQ12857 509 aa21.26■□□□□ 0.99
HLCS-205ENST00000448340 RASA3Q14644 834 aa21.26■□□□□ 0.99
HLCS-205ENST00000448340 TEX11Q8IYF3 940 aa21.26■□□□□ 0.99
HLCS-205ENST00000448340 ENTPD3O75355 529 aa21.25■□□□□ 0.99
HLCS-205ENST00000448340 ZMYM1Q5SVZ6 1142 aa21.25■□□□□ 0.99
HLCS-205ENST00000448340 FAM151AQ8WW52 585 aa21.25■□□□□ 0.99
HLCS-205ENST00000448340 OSBP2Q969R2 916 aa21.25■□□□□ 0.99
HLCS-205ENST00000448340 PUS7LQ9H0K6 701 aaKnown RBP21.25■□□□□ 0.99
HLCS-205ENST00000448340 FAM198AQ9UFP1 575 aa21.25■□□□□ 0.99
HLCS-205ENST00000448340 GPR25O00155 361 aa21.24■□□□□ 0.99
HLCS-205ENST00000448340 HIP1O00291 1037 aa21.24■□□□□ 0.99
HLCS-205ENST00000448340 BMP2KLQ5H9B9 411 aa21.24■□□□□ 0.99
HLCS-205ENST00000448340 CFHR5Q9BXR6 569 aa21.24■□□□□ 0.99
HLCS-205ENST00000448340 GTF3C3Q9Y5Q9 886 aa21.24■□□□□ 0.99
HLCS-205ENST00000448340 MBD4O95243 580 aa21.23■□□□□ 0.99
HLCS-205ENST00000448340 TCP10Q12799 353 aa21.23■□□□□ 0.99
HLCS-205ENST00000448340 LCORLQ8N3X6 602 aa21.23■□□□□ 0.99
HLCS-205ENST00000448340 TGFBRAP1Q8WUH2 860 aa21.23■□□□□ 0.99
HLCS-205ENST00000448340 CRNKL1Q9BZJ0 848 aaKnown RBP21.23■□□□□ 0.99
HLCS-205ENST00000448340 R3HDMLQ9H3Y0 253 aa21.23■□□□□ 0.99
HLCS-205ENST00000448340 ARMT1Q9H993 441 aa21.23■□□□□ 0.99
HLCS-205ENST00000448340 DDX4Q9NQI0 724 aaKnown RBP21.23■□□□□ 0.99
HLCS-205ENST00000448340 CDK5RAP2Q96SN8 1893 aa21.23■□□□□ 0.99
HLCS-205ENST00000448340 PICALMQ13492 652 aa21.22■□□□□ 0.99
HLCS-205ENST00000448340 TEPSINQ96N21 525 aa21.22■□□□□ 0.99
HLCS-205ENST00000448340 TMEM39BQ9GZU3 492 aa21.22■□□□□ 0.99
HLCS-205ENST00000448340 HELLSQ9NRZ9 838 aa21.22■□□□□ 0.99
HLCS-205ENST00000448340 FOCADQ5VW36 1801 aa21.22■□□□□ 0.99
HLCS-205ENST00000448340 RPAP1Q9BWH6 1393 aaPredicted RBP21.22■□□□□ 0.99
HLCS-205ENST00000448340 M0R2C6 588 aa21.21■□□□□ 0.99
HLCS-205ENST00000448340 USP5P45974 858 aa21.21■□□□□ 0.99
HLCS-205ENST00000448340 SUPT20HL1Q3ZLR7 823 aa21.21■□□□□ 0.99
HLCS-205ENST00000448340 STRBPQ96SI9 672 aaKnown RBP21.21■□□□□ 0.99
HLCS-205ENST00000448340 SEC62Q99442 399 aaKnown RBP21.21■□□□□ 0.99
HLCS-205ENST00000448340 DIAPH3Q9NSV4 1193 aa21.21■□□□□ 0.99
HLCS-205ENST00000448340 GPAA1O43292 621 aa21.2■□□□□ 0.98
HLCS-205ENST00000448340 LDLRAD1Q5T700 205 aa21.2■□□□□ 0.98
HLCS-205ENST00000448340 FBXO46Q6PJ61 603 aaPredicted RBP21.2■□□□□ 0.98
HLCS-205ENST00000448340 MAPKAPK5Q8IW41 473 aa21.2■□□□□ 0.98
HLCS-205ENST00000448340 ZFPM1Q8IX07 1006 aa21.2■□□□□ 0.98
HLCS-205ENST00000448340 FAM227BQ96M60 508 aa21.2■□□□□ 0.98
HLCS-205ENST00000448340 OSBPL5Q9H0X9 879 aaPredicted RBP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms