RNA–Protein interactions for RNA: ENST00000447507.1

SNHG3-203, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 185 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-203ENST00000447507 GGNQ86UU5 652 aa2.38□□□□□ -2.03
SNHG3-203ENST00000447507 SMYD4Q8IYR2 804 aaPredicted RBP2.38□□□□□ -2.03
SNHG3-203ENST00000447507 FLAD1Q8NFF5 587 aa2.38□□□□□ -2.03
SNHG3-203ENST00000447507 FAM84AQ96KN4 292 aa2.38□□□□□ -2.03
SNHG3-203ENST00000447507 FANCD2OSQ96PS1 177 aa2.38□□□□□ -2.03
SNHG3-203ENST00000447507 CCDC86Q9H6F5 360 aaKnown RBP2.38□□□□□ -2.03
SNHG3-203ENST00000447507 ABCB6Q9NP58 842 aa2.38□□□□□ -2.03
SNHG3-203ENST00000447507 NPHS2Q9NP85 383 aa2.38□□□□□ -2.03
SNHG3-203ENST00000447507 KRT82Q9NSB4 513 aa2.38□□□□□ -2.03
SNHG3-203ENST00000447507 U3KQE9 123 aa2.38□□□□□ -2.03
SNHG3-203ENST00000447507 LRRC10BA6NIK2 292 aa2.37□□□□□ -2.03
SNHG3-203ENST00000447507 RNGTTO60942 597 aaKnown RBP2.37□□□□□ -2.03
SNHG3-203ENST00000447507 CPNE3O75131 537 aaKnown RBP2.37□□□□□ -2.03
SNHG3-203ENST00000447507 LEFTY1O75610 366 aa2.37□□□□□ -2.03
SNHG3-203ENST00000447507 GSTP1P09211 210 aaKnown RBP2.37□□□□□ -2.03
SNHG3-203ENST00000447507 HCLS1P14317 486 aaPredicted RBP2.37□□□□□ -2.03
SNHG3-203ENST00000447507 ITIH2P19823 946 aa2.37□□□□□ -2.03
SNHG3-203ENST00000447507 CFPP27918 469 aa2.37□□□□□ -2.03
SNHG3-203ENST00000447507 OXCT1P55809 520 aa2.37□□□□□ -2.03
SNHG3-203ENST00000447507 TTLL4Q14679 1199 aa2.37□□□□□ -2.03
SNHG3-203ENST00000447507 KCNMB1Q16558 191 aa2.37□□□□□ -2.03
SNHG3-203ENST00000447507 AOC3Q16853 763 aa2.37□□□□□ -2.03
SNHG3-203ENST00000447507 KIF4BQ2VIQ3 1234 aa2.37□□□□□ -2.03
SNHG3-203ENST00000447507 KRTAP5-11Q6L8G4 156 aa2.37□□□□□ -2.03
SNHG3-203ENST00000447507 SLC23A3Q6PIS1 610 aa2.37□□□□□ -2.03
SNHG3-203ENST00000447507 ZSWIM9Q86XI8 627 aa2.37□□□□□ -2.03
SNHG3-203ENST00000447507 TOP6BLQ8N6T0 577 aa2.37□□□□□ -2.03
SNHG3-203ENST00000447507 DUSP23Q9BVJ7 150 aa2.37□□□□□ -2.03
SNHG3-203ENST00000447507 ZC3H12CQ9C0D7 883 aaKnown RBP2.37□□□□□ -2.03
SNHG3-203ENST00000447507 ANO2Q9NQ90 1003 aa2.37□□□□□ -2.03
SNHG3-203ENST00000447507 DISC1Q9NRI5 854 aa2.37□□□□□ -2.03
SNHG3-203ENST00000447507 FAM53CQ9NYF3 392 aa2.37□□□□□ -2.03
SNHG3-203ENST00000447507 EGFL7Q9UHF1 273 aa2.37□□□□□ -2.03
SNHG3-203ENST00000447507 BRPF3Q9ULD4 1205 aa2.37□□□□□ -2.03
SNHG3-203ENST00000447507 PCDHGC5Q9Y5F6 944 aa2.37□□□□□ -2.03
SNHG3-203ENST00000447507 TMEM238LA0A1B0GVL6 79 aa2.36□□□□□ -2.03
SNHG3-203ENST00000447507 H3BRB1 525 aa2.36□□□□□ -2.03
SNHG3-203ENST00000447507 NDUFB5O43674 189 aa2.36□□□□□ -2.03
SNHG3-203ENST00000447507 ZNF862O60290 1169 aa2.36□□□□□ -2.03
SNHG3-203ENST00000447507 GADD45BO75293 160 aaPredicted RBP2.36□□□□□ -2.03
SNHG3-203ENST00000447507 TSPAN15O95858 294 aa2.36□□□□□ -2.03
SNHG3-203ENST00000447507 KRTAP5-9P26371 169 aa2.36□□□□□ -2.03
SNHG3-203ENST00000447507 ZNF157P51786 506 aaPredicted RBP2.36□□□□□ -2.03
SNHG3-203ENST00000447507 KRTAP10-2P60368 255 aa2.36□□□□□ -2.03
SNHG3-203ENST00000447507 MESP2Q0VG99 397 aa2.36□□□□□ -2.03
SNHG3-203ENST00000447507 PDE3BQ13370 1112 aa2.36□□□□□ -2.03
SNHG3-203ENST00000447507 ORC1Q13415 861 aa2.36□□□□□ -2.03
SNHG3-203ENST00000447507 IKZF1Q13422 519 aa2.36□□□□□ -2.03
SNHG3-203ENST00000447507 GLYCTKQ8IVS8 523 aa2.36□□□□□ -2.03
SNHG3-203ENST00000447507 ISL2Q96A47 359 aa2.36□□□□□ -2.03
SNHG3-203ENST00000447507 WDR89Q96FK6 387 aaPredicted RBP2.36□□□□□ -2.03
SNHG3-203ENST00000447507 PPP1R16BQ96T49 567 aa2.36□□□□□ -2.03
SNHG3-203ENST00000447507 TNKS2Q9H2K2 1166 aa2.36□□□□□ -2.03
SNHG3-203ENST00000447507 TUT1Q9H6E5 874 aaKnown RBP2.36□□□□□ -2.03
SNHG3-203ENST00000447507 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP2.36□□□□□ -2.03
SNHG3-203ENST00000447507 GPN3Q9UHW5 284 aaPredicted RBP2.36□□□□□ -2.03
SNHG3-203ENST00000447507 PCOLCE2Q9UKZ9 415 aa2.36□□□□□ -2.03
SNHG3-203ENST00000447507 PLAGL2Q9UPG8 496 aa2.36□□□□□ -2.03
SNHG3-203ENST00000447507 TRAK1Q9UPV9 953 aa2.36□□□□□ -2.03
SNHG3-203ENST00000447507 SNX11Q9Y5W9 270 aa2.36□□□□□ -2.03
SNHG3-203ENST00000447507 ICMTO60725 284 aa2.35□□□□□ -2.03
SNHG3-203ENST00000447507 PPP1R15AO75807 674 aaPredicted RBP2.35□□□□□ -2.03
SNHG3-203ENST00000447507 NEFMP07197 916 aa2.35□□□□□ -2.03
SNHG3-203ENST00000447507 RAP1GAPP47736 663 aa2.35□□□□□ -2.03
SNHG3-203ENST00000447507 ZP2Q05996 745 aa2.35□□□□□ -2.03
SNHG3-203ENST00000447507 PPP2R3AQ06190 1150 aa2.35□□□□□ -2.03
SNHG3-203ENST00000447507 FAAP100Q0VG06 881 aa2.35□□□□□ -2.03
SNHG3-203ENST00000447507 MLANAQ16655 118 aa2.35□□□□□ -2.03
SNHG3-203ENST00000447507 B4GALNT3Q6L9W6 998 aa2.35□□□□□ -2.03
SNHG3-203ENST00000447507 PHLDB3Q6NSJ2 640 aa2.35□□□□□ -2.03
SNHG3-203ENST00000447507 PHF6Q8IWS0 365 aaKnown RBP eCLIP2.35□□□□□ -2.03
SNHG3-203ENST00000447507 SPACA3Q8IXA5 215 aa2.35□□□□□ -2.03
SNHG3-203ENST00000447507 ASB11Q8WXH4 323 aa2.35□□□□□ -2.03
SNHG3-203ENST00000447507 KCNB2Q92953 911 aa2.35□□□□□ -2.03
SNHG3-203ENST00000447507 CCDC74AQ96AQ1 378 aa2.35□□□□□ -2.03
SNHG3-203ENST00000447507 FAM129BQ96TA1 746 aa2.35□□□□□ -2.03
SNHG3-203ENST00000447507 DNAJC25Q9H1X3 360 aa2.35□□□□□ -2.03
SNHG3-203ENST00000447507 SSU72Q9NP77 194 aaKnown RBP2.35□□□□□ -2.03
SNHG3-203ENST00000447507 PRDM7Q9NQW5 492 aa2.35□□□□□ -2.03
SNHG3-203ENST00000447507 GTF2IRD1Q9UHL9 959 aa2.35□□□□□ -2.03
SNHG3-203ENST00000447507 ZNF503-AS2A6NEH8 195 aa2.34□□□□□ -2.03
SNHG3-203ENST00000447507 GNAT3A8MTJ3 354 aa2.34□□□□□ -2.03
SNHG3-203ENST00000447507 IQCJ-SCHIP1C9J366 451 aaPredicted RBP2.34□□□□□ -2.03
SNHG3-203ENST00000447507 IGF2BP3O00425 579 aaKnown RBP eCLIP2.34□□□□□ -2.03
SNHG3-203ENST00000447507 EIF1AYO14602 144 aaKnown RBP2.34□□□□□ -2.03
SNHG3-203ENST00000447507 GLI1P08151 1106 aa2.34□□□□□ -2.03
SNHG3-203ENST00000447507 ZSCAN22P10073 491 aaPredicted RBP2.34□□□□□ -2.03
SNHG3-203ENST00000447507 AFMP43652 599 aa2.34□□□□□ -2.03
SNHG3-203ENST00000447507 CLCN7P51798 805 aa2.34□□□□□ -2.03
SNHG3-203ENST00000447507 ERVK-24P63145 666 aa2.34□□□□□ -2.03
SNHG3-203ENST00000447507 GRM2Q14416 872 aa2.34□□□□□ -2.03
SNHG3-203ENST00000447507 DTHD1Q6ZMT9 781 aa2.34□□□□□ -2.03
SNHG3-203ENST00000447507 PDZD3Q86UT5 571 aa2.34□□□□□ -2.03
SNHG3-203ENST00000447507 SULF2Q8IWU5 870 aa2.34□□□□□ -2.03
SNHG3-203ENST00000447507 LRRC56Q8IYG6 542 aaPredicted RBP2.34□□□□□ -2.03
SNHG3-203ENST00000447507 RNF214Q8ND24 703 aa2.34□□□□□ -2.03
SNHG3-203ENST00000447507 CRELD1Q96HD1 420 aa2.34□□□□□ -2.03
SNHG3-203ENST00000447507 CITED4Q96RK1 184 aa2.34□□□□□ -2.03
SNHG3-203ENST00000447507 TMEM39AQ9NV64 488 aa2.34□□□□□ -2.03
SNHG3-203ENST00000447507 CTNND2Q9UQB3 1225 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms