RNA–Protein interactions for RNA: ENST00000446803.6

TBC1D1-209, Transcript of TBC1 domain family member 1, humanhuman

TSL 2

Gene TBC1D1, Length 1,987 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D1-209ENST00000446803 VPS33BQ9H267 617 aa27.59■■■□□ 2.01
TBC1D1-209ENST00000446803 CNNM2Q9H8M5 875 aa27.59■■■□□ 2.01
TBC1D1-209ENST00000446803 MCM9Q9NXL9 1143 aa27.59■■■□□ 2.01
TBC1D1-209ENST00000446803 ADAMTSL1Q8N6G6 1762 aa27.59■■■□□ 2.01
TBC1D1-209ENST00000446803 RRP12Q5JTH9 1297 aaKnown RBP27.59■■■□□ 2.01
TBC1D1-209ENST00000446803 TEX11Q8IYF3 940 aa27.59■■■□□ 2.01
TBC1D1-209ENST00000446803 NECAB1Q8N987 351 aa27.59■■■□□ 2.01
TBC1D1-209ENST00000446803 AGXT2Q9BYV1 514 aa27.59■■■□□ 2.01
TBC1D1-209ENST00000446803 KRT23Q9C075 422 aa27.59■■■□□ 2.01
TBC1D1-209ENST00000446803 RNF41Q9H4P4 317 aaPredicted RBP27.59■■■□□ 2.01
TBC1D1-209ENST00000446803 NAV1Q8NEY1 1877 aa27.58■■■□□ 2.01
TBC1D1-209ENST00000446803 PSME4Q14997 1843 aa27.58■■■□□ 2.01
TBC1D1-209ENST00000446803 STK3Q13188 491 aa27.58■■■□□ 2.01
TBC1D1-209ENST00000446803 CYB5R4Q7L1T6 521 aa27.58■■■□□ 2.01
TBC1D1-209ENST00000446803 ARPP21Q9UBL0 812 aaPredicted RBP27.58■■■□□ 2.01
TBC1D1-209ENST00000446803 CIZ1Q9ULV3 898 aaPredicted RBP27.58■■■□□ 2.01
TBC1D1-209ENST00000446803 COL4A5P29400 1685 aa27.58■■■□□ 2.01
TBC1D1-209ENST00000446803 IARSP41252 1262 aaKnown RBP27.57■■■□□ 2
TBC1D1-209ENST00000446803 APOBRQ0VD83 1088 aa27.57■■■□□ 2
TBC1D1-209ENST00000446803 TEKT1Q969V4 418 aa27.57■■■□□ 2
TBC1D1-209ENST00000446803 TAOK3Q9H2K8 898 aa27.57■■■□□ 2
TBC1D1-209ENST00000446803 MKRN1Q9UHC7 482 aaKnown RBP27.57■■■□□ 2
TBC1D1-209ENST00000446803 USP17L8P0C7I0 530 aa27.57■■■□□ 2
TBC1D1-209ENST00000446803 RHBDL3P58872 404 aa27.57■■■□□ 2
TBC1D1-209ENST00000446803 MAPKAPK5Q8IW41 473 aa27.57■■■□□ 2
TBC1D1-209ENST00000446803 GPHNQ9NQX3 736 aaPredicted RBP27.57■■■□□ 2
TBC1D1-209ENST00000446803 WDR19Q8NEZ3 1342 aa27.56■■■□□ 2
TBC1D1-209ENST00000446803 KDM4AO75164 1064 aa27.56■■■□□ 2
TBC1D1-209ENST00000446803 CYP2D6P10635 497 aa27.56■■■□□ 2
TBC1D1-209ENST00000446803 SLC4A8Q2Y0W8 1093 aa27.56■■■□□ 2
TBC1D1-209ENST00000446803 SBK1Q52WX2 424 aa27.56■■■□□ 2
TBC1D1-209ENST00000446803 HHIPL2Q6UWX4 724 aa27.56■■■□□ 2
TBC1D1-209ENST00000446803 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.56■■■□□ 2
TBC1D1-209ENST00000446803 EVX2Q03828 476 aa27.55■■■□□ 2
TBC1D1-209ENST00000446803 NIM1KQ8IY84 436 aa27.55■■■□□ 2
TBC1D1-209ENST00000446803 FBXL16Q8N461 479 aa27.55■■■□□ 2
TBC1D1-209ENST00000446803 ZSWIM5Q9P217 1185 aa27.55■■■□□ 2
TBC1D1-209ENST00000446803 RAD17O75943 681 aa27.55■■■□□ 2
TBC1D1-209ENST00000446803 CRKP46108 304 aa27.55■■■□□ 2
TBC1D1-209ENST00000446803 ST3GAL1Q11201 340 aa27.54■■■□□ 2
TBC1D1-209ENST00000446803 NAP1L2Q9ULW6 460 aaPredicted RBP27.54■■■□□ 2
TBC1D1-209ENST00000446803 FOCADQ5VW36 1801 aa27.53■■■□□ 2
TBC1D1-209ENST00000446803 NFKBIEO00221 500 aa27.53■■■□□ 2
TBC1D1-209ENST00000446803 AMOTL1Q8IY63 956 aa27.53■■■□□ 2
TBC1D1-209ENST00000446803 SAP30BPQ9UHR5 308 aaKnown RBP27.53■■■□□ 2
TBC1D1-209ENST00000446803 ZNRF3Q9ULT6 936 aa27.53■■■□□ 2
TBC1D1-209ENST00000446803 MYH1P12882 1939 aa27.52■■■□□ 2
TBC1D1-209ENST00000446803 SLC3A2P08195 630 aaKnown RBP27.52■■■□□ 2
TBC1D1-209ENST00000446803 RBM5P52756 815 aaKnown RBP eCLIP27.52■■■□□ 2
TBC1D1-209ENST00000446803 USP40Q9NVE5 1235 aa27.52■■■□□ 2
TBC1D1-209ENST00000446803 ARFGEF1Q9Y6D6 1849 aa27.52■■■□□ 2
TBC1D1-209ENST00000446803 PSMD14O00487 310 aa27.51■■■□□ 2
TBC1D1-209ENST00000446803 C12orf60Q5U649 245 aa27.51■■■□□ 2
TBC1D1-209ENST00000446803 MRIQ9BWK5 157 aa27.51■■■□□ 2
TBC1D1-209ENST00000446803 SMC3Q9UQE7 1217 aa27.51■■■□□ 2
TBC1D1-209ENST00000446803 FLT1P17948 1338 aa27.51■■□□□ 1.99
TBC1D1-209ENST00000446803 PRDM1O75626 825 aa27.51■■□□□ 1.99
TBC1D1-209ENST00000446803 POLR3DP05423 398 aaPredicted RBP27.51■■□□□ 1.99
TBC1D1-209ENST00000446803 APOBEC3HQ6NTF7 200 aaKnown RBP27.51■■□□□ 1.99
TBC1D1-209ENST00000446803 TMEM87BQ96K49 555 aa27.51■■□□□ 1.99
TBC1D1-209ENST00000446803 ZDHHC15Q96MV8 337 aa27.51■■□□□ 1.99
TBC1D1-209ENST00000446803 ANGEL1Q9UNK9 670 aaKnown RBP27.51■■□□□ 1.99
TBC1D1-209ENST00000446803 ECM29Q5VYK3 1845 aa27.5■■□□□ 1.99
TBC1D1-209ENST00000446803 DTNBO60941 627 aa27.5■■□□□ 1.99
TBC1D1-209ENST00000446803 HDLBPQ00341 1268 aaKnown RBP27.5■■□□□ 1.99
TBC1D1-209ENST00000446803 RSBN1LQ6PCB5 846 aaPredicted RBP27.5■■□□□ 1.99
TBC1D1-209ENST00000446803 ESR2Q92731 530 aa27.5■■□□□ 1.99
TBC1D1-209ENST00000446803 GTF3C6Q969F1 213 aa27.5■■□□□ 1.99
TBC1D1-209ENST00000446803 SH2B2O14492 632 aaPredicted RBP27.49■■□□□ 1.99
TBC1D1-209ENST00000446803 PCP11498 1178 aaKnown RBP27.49■■□□□ 1.99
TBC1D1-209ENST00000446803 PICALMQ13492 652 aa27.49■■□□□ 1.99
TBC1D1-209ENST00000446803 ZNF274Q96GC6 653 aaPredicted RBP27.49■■□□□ 1.99
TBC1D1-209ENST00000446803 PCDHAC2Q9Y5I4 1007 aa27.49■■□□□ 1.99
TBC1D1-209ENST00000446803 VIL1P09327 827 aaKnown RBP27.49■■□□□ 1.99
TBC1D1-209ENST00000446803 FGRP09769 529 aa27.49■■□□□ 1.99
TBC1D1-209ENST00000446803 PDIA3P30101 505 aaKnown RBP27.49■■□□□ 1.99
TBC1D1-209ENST00000446803 TMEM67Q5HYA8 995 aa27.49■■□□□ 1.99
TBC1D1-209ENST00000446803 CDC42EP5Q6NZY7 148 aa27.49■■□□□ 1.99
TBC1D1-209ENST00000446803 IGDCC4Q8TDY8 1250 aa27.49■■□□□ 1.99
TBC1D1-209ENST00000446803 JDP2Q8WYK2 163 aa27.49■■□□□ 1.99
TBC1D1-209ENST00000446803 ZKSCAN3Q9BRR0 538 aa27.49■■□□□ 1.99
TBC1D1-209ENST00000446803 SERPINA10Q9UK55 444 aa27.49■■□□□ 1.99
TBC1D1-209ENST00000446803 MYO3BQ8WXR4 1341 aa27.48■■□□□ 1.99
TBC1D1-209ENST00000446803 KLF18A0A0U1RQI7 1052 aa27.48■■□□□ 1.99
TBC1D1-209ENST00000446803 IFIT3O14879 490 aaKnown RBP27.48■■□□□ 1.99
TBC1D1-209ENST00000446803 RANBP6O60518 1105 aaKnown RBP27.48■■□□□ 1.99
TBC1D1-209ENST00000446803 PFKFB2O60825 505 aa27.48■■□□□ 1.99
TBC1D1-209ENST00000446803 PDE4BQ07343 736 aa27.48■■□□□ 1.99
TBC1D1-209ENST00000446803 SCRN1Q12765 414 aa27.48■■□□□ 1.99
TBC1D1-209ENST00000446803 FHDC1Q9C0D6 1143 aaPredicted RBP27.48■■□□□ 1.99
TBC1D1-209ENST00000446803 BRPF3Q9ULD4 1205 aa27.48■■□□□ 1.99
TBC1D1-209ENST00000446803 DDX60LQ5H9U9 1706 aaKnown RBP27.48■■□□□ 1.99
TBC1D1-209ENST00000446803 EVCP57679 992 aa27.48■■□□□ 1.99
TBC1D1-209ENST00000446803 NUCB2P80303 420 aa27.48■■□□□ 1.99
TBC1D1-209ENST00000446803 PKP1Q13835 747 aa27.48■■□□□ 1.99
TBC1D1-209ENST00000446803 RAB3GAP1Q15042 981 aa27.48■■□□□ 1.99
TBC1D1-209ENST00000446803 PLCD1P51178 756 aa27.47■■□□□ 1.99
TBC1D1-209ENST00000446803 CCT2P78371 535 aaKnown RBP27.47■■□□□ 1.99
TBC1D1-209ENST00000446803 RASSF7Q02833 373 aa27.47■■□□□ 1.99
TBC1D1-209ENST00000446803 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms