RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 ZNF384Q8TF68 577 aa15.95■□□□□ 0.14
RBM39-216ENST00000444878 DDX19AQ9NUU7 478 aaKnown RBP15.95■□□□□ 0.14
RBM39-216ENST00000444878 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.95■□□□□ 0.14
RBM39-216ENST00000444878 ECM29Q5VYK3 1845 aa15.95■□□□□ 0.14
RBM39-216ENST00000444878 CDC27P30260 824 aa15.95■□□□□ 0.14
RBM39-216ENST00000444878 ST5P78524 1137 aa15.95■□□□□ 0.14
RBM39-216ENST00000444878 MECOMQ03112 1051 aa15.95■□□□□ 0.14
RBM39-216ENST00000444878 WTAPQ15007 396 aa15.95■□□□□ 0.14
RBM39-216ENST00000444878 MAP3K11Q16584 847 aa15.95■□□□□ 0.14
RBM39-216ENST00000444878 ILDR1Q86SU0 546 aaPredicted RBP15.95■□□□□ 0.14
RBM39-216ENST00000444878 RPGRQ92834 1020 aaKnown RBP15.95■□□□□ 0.14
RBM39-216ENST00000444878 ZKSCAN3Q9BRR0 538 aa15.95■□□□□ 0.14
RBM39-216ENST00000444878 MTA3Q9BTC8 594 aa15.95■□□□□ 0.14
RBM39-216ENST00000444878 MYL10Q9BUA6 226 aa15.95■□□□□ 0.14
RBM39-216ENST00000444878 FTOQ9C0B1 505 aaKnown RBP eCLIP15.95■□□□□ 0.141e-8■□□□□ 10.4
RBM39-216ENST00000444878 ANAPC4Q9UJX5 808 aa15.95■□□□□ 0.14
RBM39-216ENST00000444878 LEMD3Q9Y2U8 911 aa15.95■□□□□ 0.14
RBM39-216ENST00000444878 MAST2Q6P0Q8 1798 aa15.94■□□□□ 0.14
RBM39-216ENST00000444878 CAMK4Q16566 473 aa15.94■□□□□ 0.14
RBM39-216ENST00000444878 PDLIM2Q96JY6 352 aa15.94■□□□□ 0.14
RBM39-216ENST00000444878 FUCA2Q9BTY2 467 aa15.94■□□□□ 0.14
RBM39-216ENST00000444878 BRIP1Q9BX63 1249 aa15.94■□□□□ 0.14
RBM39-216ENST00000444878 TNMDQ9H2S6 317 aa15.94■□□□□ 0.14
RBM39-216ENST00000444878 PRDX5P30044 214 aa15.94■□□□□ 0.14
RBM39-216ENST00000444878 IARSP41252 1262 aaKnown RBP15.94■□□□□ 0.14
RBM39-216ENST00000444878 UVSSAQ2YD98 709 aa15.94■□□□□ 0.14
RBM39-216ENST00000444878 TMTC2Q8N394 836 aa15.94■□□□□ 0.14
RBM39-216ENST00000444878 RGS22Q8NE09 1264 aa15.94■□□□□ 0.14
RBM39-216ENST00000444878 PHKBQ93100 1093 aa15.94■□□□□ 0.14
RBM39-216ENST00000444878 UBAC1Q9BSL1 405 aa15.94■□□□□ 0.14
RBM39-216ENST00000444878 ALG1Q9BT22 464 aa15.94■□□□□ 0.14
RBM39-216ENST00000444878 RRAGDQ9NQL2 400 aaPredicted RBP15.94■□□□□ 0.14
RBM39-216ENST00000444878 GJB4Q9NTQ9 266 aa15.94■□□□□ 0.14
RBM39-216ENST00000444878 MYH6P13533 1939 aa15.94■□□□□ 0.14
RBM39-216ENST00000444878 NR1I2O75469 434 aa15.93■□□□□ 0.14
RBM39-216ENST00000444878 SERPINB2P05120 415 aa15.93■□□□□ 0.14
RBM39-216ENST00000444878 CCDC192P0DO97 292 aa15.93■□□□□ 0.14
RBM39-216ENST00000444878 PPP4R3CPQ6ZMV5 832 aa15.93■□□□□ 0.14
RBM39-216ENST00000444878 BRAPQ7Z569 592 aa15.93■□□□□ 0.14
RBM39-216ENST00000444878 ESR2Q92731 530 aa15.93■□□□□ 0.14
RBM39-216ENST00000444878 AATFQ9NY61 560 aaKnown RBP eCLIP15.93■□□□□ 0.14
RBM39-216ENST00000444878 XDHP47989 1333 aa15.93■□□□□ 0.14
RBM39-216ENST00000444878 POLR3DP05423 398 aaPredicted RBP15.92■□□□□ 0.14
RBM39-216ENST00000444878 NTRK3Q16288 839 aa15.92■□□□□ 0.14
RBM39-216ENST00000444878 SPTY2D1Q68D10 685 aaPredicted RBP15.92■□□□□ 0.14
RBM39-216ENST00000444878 ARID3AQ99856 593 aa15.92■□□□□ 0.14
RBM39-216ENST00000444878 JAG2Q9Y219 1238 aa15.92■□□□□ 0.14
RBM39-216ENST00000444878 IRS2Q9Y4H2 1338 aa15.92■□□□□ 0.14
RBM39-216ENST00000444878 ESPNB1AK53 854 aa15.92■□□□□ 0.14
RBM39-216ENST00000444878 ME1P48163 572 aa15.92■□□□□ 0.14
RBM39-216ENST00000444878 TMED8Q6PL24 325 aaPredicted RBP15.92■□□□□ 0.14
RBM39-216ENST00000444878 DZIP1Q86YF9 867 aaKnown RBP15.92■□□□□ 0.14
RBM39-216ENST00000444878 CRNKL1Q9BZJ0 848 aaKnown RBP15.92■□□□□ 0.14
RBM39-216ENST00000444878 CLSTN2Q9H4D0 955 aa15.92■□□□□ 0.14
RBM39-216ENST00000444878 FAM217BQ9NTX9 383 aaPredicted RBP15.92■□□□□ 0.14
RBM39-216ENST00000444878 AIFM3Q96NN9 605 aa15.91■□□□□ 0.14
RBM39-216ENST00000444878 RTEL1Q9NZ71 1219 aa15.91■□□□□ 0.14
RBM39-216ENST00000444878 KIAA1551Q9HCM1 1747 aa15.91■□□□□ 0.14
RBM39-216ENST00000444878 DUOX1Q9NRD9 1551 aa15.91■□□□□ 0.14
RBM39-216ENST00000444878 KIF23Q02241 960 aaPredicted RBP15.91■□□□□ 0.14
RBM39-216ENST00000444878 SSRP1Q08945 709 aaKnown RBP15.91■□□□□ 0.14
RBM39-216ENST00000444878 TRIM29Q14134 588 aa15.91■□□□□ 0.14
RBM39-216ENST00000444878 RTN1Q16799 776 aa15.91■□□□□ 0.14
RBM39-216ENST00000444878 CRY2Q49AN0 593 aa15.91■□□□□ 0.14
RBM39-216ENST00000444878 MYSM1Q5VVJ2 828 aa15.91■□□□□ 0.14
RBM39-216ENST00000444878 CCAR1Q8IX12 1150 aaKnown RBP15.91■□□□□ 0.14
RBM39-216ENST00000444878 WDR66Q8TBY9 1149 aa15.91■□□□□ 0.14
RBM39-216ENST00000444878 SLC26A6Q9BXS9 759 aa15.91■□□□□ 0.14
RBM39-216ENST00000444878 LAMB1P07942 1786 aa15.9■□□□□ 0.14
RBM39-216ENST00000444878 NID2Q14112 1375 aa15.9■□□□□ 0.14
RBM39-216ENST00000444878 STK36Q9NRP7 1315 aa15.9■□□□□ 0.14
RBM39-216ENST00000444878 CYP2D7A0A087X1C5 515 aa15.9■□□□□ 0.14
RBM39-216ENST00000444878 USP17L12C9JPN9 530 aa15.9■□□□□ 0.14
RBM39-216ENST00000444878 USP17L21D6R901 530 aa15.9■□□□□ 0.14
RBM39-216ENST00000444878 RANBP6O60518 1105 aaKnown RBP15.9■□□□□ 0.14
RBM39-216ENST00000444878 PCP11498 1178 aaKnown RBP15.9■□□□□ 0.14
RBM39-216ENST00000444878 HMGB2P26583 209 aaKnown RBP15.9■□□□□ 0.14
RBM39-216ENST00000444878 CTR9Q6PD62 1173 aa15.9■□□□□ 0.14
RBM39-216ENST00000444878 ZNF804AQ7Z570 1209 aa15.9■□□□□ 0.14
RBM39-216ENST00000444878 SLC51AQ86UW1 340 aa15.9■□□□□ 0.14
RBM39-216ENST00000444878 CKAP2LQ8IYA6 745 aa15.9■□□□□ 0.14
RBM39-216ENST00000444878 RBM17Q96I25 401 aaKnown RBP15.9■□□□□ 0.14
RBM39-216ENST00000444878 TNKSO95271 1327 aa15.89■□□□□ 0.14
RBM39-216ENST00000444878 CCDC196A0A1B0GTZ2 297 aa15.89■□□□□ 0.13
RBM39-216ENST00000444878 KIF28PB7ZC32 967 aa15.89■□□□□ 0.13
RBM39-216ENST00000444878 SMIM22K7EJ46 135 aa15.89■□□□□ 0.13
RBM39-216ENST00000444878 IFNAR1P17181 557 aa15.89■□□□□ 0.13
RBM39-216ENST00000444878 STK38Q15208 465 aa15.89■□□□□ 0.13
RBM39-216ENST00000444878 SF3A1Q15459 793 aaKnown RBP15.89■□□□□ 0.13
RBM39-216ENST00000444878 TXNRD1Q16881 649 aa15.89■□□□□ 0.13
RBM39-216ENST00000444878 KRT40Q6A162 431 aa15.89■□□□□ 0.13
RBM39-216ENST00000444878 CCDC73Q6ZRK6 1079 aa15.89■□□□□ 0.13
RBM39-216ENST00000444878 DCP1AQ9NPI6 582 aaPredicted RBP15.89■□□□□ 0.13
RBM39-216ENST00000444878 ATP8A2Q9NTI2 1148 aa15.89■□□□□ 0.13
RBM39-216ENST00000444878 POLR3EQ9NVU0 708 aa15.89■□□□□ 0.13
RBM39-216ENST00000444878 FMNL1O95466 1100 aaPredicted RBP15.89■□□□□ 0.13
RBM39-216ENST00000444878 LDHBP07195 334 aaKnown RBP15.89■□□□□ 0.13
RBM39-216ENST00000444878 RCAN1P53805 252 aa15.89■□□□□ 0.13
RBM39-216ENST00000444878 GNL2Q13823 731 aaKnown RBP15.89■□□□□ 0.13
RBM39-216ENST00000444878 RBM43Q6ZSC3 357 aaKnown RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms