RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 SMIM22K7EJ46 135 aa18.39■□□□□ 0.53
SYNCRIP-203ENST00000444272 NOL9Q5SY16 702 aaKnown RBP18.39■□□□□ 0.53
SYNCRIP-203ENST00000444272 KHSRPQ92945 711 aaKnown RBP eCLIP18.39■□□□□ 0.534e-19■■■■■ 65.5
SYNCRIP-203ENST00000444272 BABAM1Q9NWV8 329 aa18.39■□□□□ 0.53
SYNCRIP-203ENST00000444272 TMOD2Q9NZR1 351 aa18.39■□□□□ 0.53
SYNCRIP-203ENST00000444272 CFAP54Q96N23 3096 aa18.39■□□□□ 0.53
SYNCRIP-203ENST00000444272 RPAP1Q9BWH6 1393 aaPredicted RBP18.39■□□□□ 0.53
SYNCRIP-203ENST00000444272 IGFBP4P22692 258 aa18.38■□□□□ 0.53
SYNCRIP-203ENST00000444272 ADGRE1Q14246 886 aa18.38■□□□□ 0.53
SYNCRIP-203ENST00000444272 TSPYL2Q9H2G4 693 aaPredicted RBP18.38■□□□□ 0.53
SYNCRIP-203ENST00000444272 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.37■□□□□ 0.53
SYNCRIP-203ENST00000444272 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.37■□□□□ 0.53
SYNCRIP-203ENST00000444272 ZHX2Q9Y6X8 837 aa18.37■□□□□ 0.53
SYNCRIP-203ENST00000444272 RLFQ13129 1914 aa18.36■□□□□ 0.53
SYNCRIP-203ENST00000444272 PLEKHF1Q96S99 279 aa18.36■□□□□ 0.53
SYNCRIP-203ENST00000444272 CHD7Q9P2D1 2997 aa18.36■□□□□ 0.53
SYNCRIP-203ENST00000444272 ITGA6P23229 1130 aa18.35■□□□□ 0.53
SYNCRIP-203ENST00000444272 EPHB4P54760 987 aa18.35■□□□□ 0.53
SYNCRIP-203ENST00000444272 AAK1Q2M2I8 961 aa18.35■□□□□ 0.53
SYNCRIP-203ENST00000444272 PLXNA1Q9UIW2 1896 aa18.35■□□□□ 0.53
SYNCRIP-203ENST00000444272 ZKSCAN1P17029 563 aaPredicted RBP18.34■□□□□ 0.53
SYNCRIP-203ENST00000444272 SH3RF1Q7Z6J0 888 aa18.34■□□□□ 0.53
SYNCRIP-203ENST00000444272 PHAXQ9H814 394 aaKnown RBP18.34■□□□□ 0.53
SYNCRIP-203ENST00000444272 PDLIM7Q9NR12 457 aa18.34■□□□□ 0.53
SYNCRIP-203ENST00000444272 TRIM43BA6NCK2 446 aa18.33■□□□□ 0.52
SYNCRIP-203ENST00000444272 GRIK5Q16478 980 aa18.33■□□□□ 0.52
SYNCRIP-203ENST00000444272 FKBP1CQ5VVH2 108 aa18.33■□□□□ 0.52
SYNCRIP-203ENST00000444272 TRIM43Q96BQ3 446 aaPredicted RBP18.33■□□□□ 0.52
SYNCRIP-203ENST00000444272 AGTPBP1Q9UPW5 1226 aa18.33■□□□□ 0.52
SYNCRIP-203ENST00000444272 AFG3L2Q9Y4W6 797 aa18.33■□□□□ 0.52
SYNCRIP-203ENST00000444272 LRRC37A2A6NM11 1700 aa18.32■□□□□ 0.52
SYNCRIP-203ENST00000444272 PRR33A8MZF0 331 aa18.32■□□□□ 0.52
SYNCRIP-203ENST00000444272 PNMA3Q9UL41 463 aa18.32■□□□□ 0.52
SYNCRIP-203ENST00000444272 MAPK8IP3Q9UPT6 1336 aa18.31■□□□□ 0.52
SYNCRIP-203ENST00000444272 XRCC5P13010 732 aaKnown RBP18.31■□□□□ 0.52
SYNCRIP-203ENST00000444272 PBX2P40425 430 aa18.31■□□□□ 0.52
SYNCRIP-203ENST00000444272 FOXK2Q01167 660 aa18.31■□□□□ 0.52
SYNCRIP-203ENST00000444272 TRIM60Q495X7 471 aa18.31■□□□□ 0.52
SYNCRIP-203ENST00000444272 TREML2Q5T2D2 321 aa18.31■□□□□ 0.52
SYNCRIP-203ENST00000444272 MICALL1Q8N3F8 863 aa18.31■□□□□ 0.52
SYNCRIP-203ENST00000444272 TEKT1Q969V4 418 aa18.31■□□□□ 0.52
SYNCRIP-203ENST00000444272 NUDT12Q9BQG2 462 aa18.31■□□□□ 0.52
SYNCRIP-203ENST00000444272 METTL22Q9BUU2 404 aaPredicted RBP18.31■□□□□ 0.52
SYNCRIP-203ENST00000444272 PHIPQ8WWQ0 1821 aa18.3■□□□□ 0.52
SYNCRIP-203ENST00000444272 TRIM75PA6NK02 468 aa18.3■□□□□ 0.52
SYNCRIP-203ENST00000444272 DNM1LO00429 736 aa18.3■□□□□ 0.52
SYNCRIP-203ENST00000444272 PTPRAP18433 802 aa18.3■□□□□ 0.52
SYNCRIP-203ENST00000444272 GCLCP48506 637 aaPredicted RBP18.3■□□□□ 0.52
SYNCRIP-203ENST00000444272 CCL14Q16627 93 aa18.3■□□□□ 0.52
SYNCRIP-203ENST00000444272 SLC39A5Q6ZMH5 540 aa18.3■□□□□ 0.52
SYNCRIP-203ENST00000444272 TRMT44Q8IYL2 757 aaKnown RBP18.3■□□□□ 0.52
SYNCRIP-203ENST00000444272 SCYL3Q8IZE3 742 aa18.3■□□□□ 0.52
SYNCRIP-203ENST00000444272 TDRD7Q8NHU6 1098 aaKnown RBP18.3■□□□□ 0.52
SYNCRIP-203ENST00000444272 PICK1Q9NRD5 415 aa18.3■□□□□ 0.52
SYNCRIP-203ENST00000444272 HOXB7P09629 217 aa18.29■□□□□ 0.52
SYNCRIP-203ENST00000444272 ITGB8P26012 769 aa18.29■□□□□ 0.52
SYNCRIP-203ENST00000444272 CCDC129Q6ZRS4 1044 aa18.29■□□□□ 0.52
SYNCRIP-203ENST00000444272 FBXL18Q96ME1 805 aa18.29■□□□□ 0.52
SYNCRIP-203ENST00000444272 PBX4Q9BYU1 374 aa18.29■□□□□ 0.52
SYNCRIP-203ENST00000444272 PI4K2BG5E9Z4 385 aa18.28■□□□□ 0.52
SYNCRIP-203ENST00000444272 PPP2R1AP30153 589 aa18.28■□□□□ 0.52
SYNCRIP-203ENST00000444272 HDLBPQ00341 1268 aaKnown RBP18.28■□□□□ 0.52
SYNCRIP-203ENST00000444272 TCP10Q12799 353 aa18.28■□□□□ 0.52
SYNCRIP-203ENST00000444272 APOBEC3HQ6NTF7 200 aaKnown RBP18.28■□□□□ 0.52
SYNCRIP-203ENST00000444272 FAM151AQ8WW52 585 aa18.28■□□□□ 0.52
SYNCRIP-203ENST00000444272 SOCS4Q8WXH5 440 aa18.28■□□□□ 0.52
SYNCRIP-203ENST00000444272 ZDHHC15Q96MV8 337 aa18.28■□□□□ 0.52
SYNCRIP-203ENST00000444272 UIMC1Q96RL1 719 aa18.28■□□□□ 0.52
SYNCRIP-203ENST00000444272 DAGLAQ9Y4D2 1042 aa18.28■□□□□ 0.52
SYNCRIP-203ENST00000444272 C5orf42Q9H799 3197 aa18.28■□□□□ 0.52
SYNCRIP-203ENST00000444272 GRXCR1A8MXD5 290 aa18.27■□□□□ 0.52
SYNCRIP-203ENST00000444272 RIPK4P57078 832 aa18.27■□□□□ 0.52
SYNCRIP-203ENST00000444272 SKIV2LQ15477 1246 aaKnown RBP18.27■□□□□ 0.52
SYNCRIP-203ENST00000444272 LPAR1Q92633 364 aa18.27■□□□□ 0.52
SYNCRIP-203ENST00000444272 ZDBF2Q9HCK1 2354 aa18.26■□□□□ 0.51
SYNCRIP-203ENST00000444272 DDX20Q9UHI6 824 aaKnown RBP18.26■□□□□ 0.51
SYNCRIP-203ENST00000444272 LAS1LQ9Y4W2 734 aaKnown RBP18.26■□□□□ 0.51
SYNCRIP-203ENST00000444272 DOCK1Q14185 1865 aa18.26■□□□□ 0.51
SYNCRIP-203ENST00000444272 ERC2O15083 957 aa18.25■□□□□ 0.51
SYNCRIP-203ENST00000444272 IGKV5-2P06315 115 aa18.25■□□□□ 0.51
SYNCRIP-203ENST00000444272 GYG1P46976 350 aa18.25■□□□□ 0.51
SYNCRIP-203ENST00000444272 GJC2Q5T442 439 aaPredicted RBP18.25■□□□□ 0.51
SYNCRIP-203ENST00000444272 UBE3BQ7Z3V4 1068 aa18.25■□□□□ 0.51
SYNCRIP-203ENST00000444272 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.25■□□□□ 0.51
SYNCRIP-203ENST00000444272 LOC285556D6RIA3 1793 aa18.25■□□□□ 0.51
SYNCRIP-203ENST00000444272 DOCK2Q92608 1830 aa18.24■□□□□ 0.51
SYNCRIP-203ENST00000444272 PHF20L1A8MW92 1017 aa18.24■□□□□ 0.51
SYNCRIP-203ENST00000444272 CHL1O00533 1208 aa18.24■□□□□ 0.51
SYNCRIP-203ENST00000444272 PLIN1O60240 522 aa18.24■□□□□ 0.51
SYNCRIP-203ENST00000444272 ST18O60284 1047 aa18.24■□□□□ 0.51
SYNCRIP-203ENST00000444272 CNGA1P29973 690 aa18.24■□□□□ 0.51
SYNCRIP-203ENST00000444272 FPGSQ05932 587 aa18.24■□□□□ 0.51
SYNCRIP-203ENST00000444272 SNX17Q15036 470 aa18.24■□□□□ 0.51
SYNCRIP-203ENST00000444272 CCDC84Q86UT8 332 aaPredicted RBP18.24■□□□□ 0.51
SYNCRIP-203ENST00000444272 TLL1O43897 1013 aa18.23■□□□□ 0.51
SYNCRIP-203ENST00000444272 HIBADHP31937 336 aaKnown RBP18.23■□□□□ 0.51
SYNCRIP-203ENST00000444272 RGS2P41220 211 aa18.23■□□□□ 0.51
SYNCRIP-203ENST00000444272 TIMELESSQ9UNS1 1208 aa18.23■□□□□ 0.51
SYNCRIP-203ENST00000444272 MAP3K2Q9Y2U5 619 aa18.23■□□□□ 0.51
SYNCRIP-203ENST00000444272 TRANK1O15050 2925 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms