RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 ZKSCAN4Q969J2 545 aaPredicted RBP23.03■■□□□ 1.28
ATPAF2-201ENST00000444058 ATRNL1Q5VV63 1379 aa23.02■■□□□ 1.28
ATPAF2-201ENST00000444058 GPR25O00155 361 aa23.02■■□□□ 1.28
ATPAF2-201ENST00000444058 IGF2BP3O00425 579 aaKnown RBP eCLIP23.02■■□□□ 1.28
ATPAF2-201ENST00000444058 ZAP70P43403 619 aa23.02■■□□□ 1.28
ATPAF2-201ENST00000444058 NAA16Q6N069 864 aaPredicted RBP23.02■■□□□ 1.28
ATPAF2-201ENST00000444058 BAG3O95817 575 aa23.01■■□□□ 1.27
ATPAF2-201ENST00000444058 PPP4CP60510 307 aa23.01■■□□□ 1.27
ATPAF2-201ENST00000444058 PPATQ06203 517 aa23.01■■□□□ 1.27
ATPAF2-201ENST00000444058 DGKZQ13574 1117 aa23.01■■□□□ 1.27
ATPAF2-201ENST00000444058 NOL9Q5SY16 702 aaKnown RBP23.01■■□□□ 1.27
ATPAF2-201ENST00000444058 ZNF296Q8WUU4 475 aaPredicted RBP23.01■■□□□ 1.27
ATPAF2-201ENST00000444058 CNKSR2Q8WXI2 1034 aa23.01■■□□□ 1.27
ATPAF2-201ENST00000444058 OTUD5Q96G74 571 aa23.01■■□□□ 1.27
ATPAF2-201ENST00000444058 NOL10Q9BSC4 688 aaKnown RBP23.01■■□□□ 1.27
ATPAF2-201ENST00000444058 MCOLN1Q9GZU1 580 aa23.01■■□□□ 1.27
ATPAF2-201ENST00000444058 IL1RAPL2Q9NP60 686 aa23.01■■□□□ 1.27
ATPAF2-201ENST00000444058 DDX4Q9NQI0 724 aaKnown RBP23.01■■□□□ 1.27
ATPAF2-201ENST00000444058 COL2A1P02458 1487 aaPredicted RBP23■■□□□ 1.27
ATPAF2-201ENST00000444058 PLCG2P16885 1265 aa23■■□□□ 1.27
ATPAF2-201ENST00000444058 PPIL2Q13356 520 aa23■■□□□ 1.27
ATPAF2-201ENST00000444058 SH3BP5LQ7L8J4 393 aa23■■□□□ 1.27
ATPAF2-201ENST00000444058 ZSCAN29Q8IWY8 852 aaPredicted RBP23■■□□□ 1.27
ATPAF2-201ENST00000444058 PTPN18Q99952 460 aa23■■□□□ 1.27
ATPAF2-201ENST00000444058 CAPN15O75808 1086 aa22.99■■□□□ 1.27
ATPAF2-201ENST00000444058 INPP5BP32019 993 aa22.99■■□□□ 1.27
ATPAF2-201ENST00000444058 PICALMQ13492 652 aa22.99■■□□□ 1.27
ATPAF2-201ENST00000444058 CTU1Q7Z7A3 348 aaKnown RBP22.99■■□□□ 1.27
ATPAF2-201ENST00000444058 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.99■■□□□ 1.27
ATPAF2-201ENST00000444058 PIH1D3Q9NQM4 214 aaKnown RBP22.99■■□□□ 1.27
ATPAF2-201ENST00000444058 DDTLA6NHG4 134 aaPredicted RBP22.98■■□□□ 1.27
ATPAF2-201ENST00000444058 TBC1D12O60347 775 aa22.98■■□□□ 1.27
ATPAF2-201ENST00000444058 CETPP11597 493 aa22.98■■□□□ 1.27
ATPAF2-201ENST00000444058 SNAPC2Q13487 334 aa22.98■■□□□ 1.27
ATPAF2-201ENST00000444058 BRI3BPQ8WY22 251 aa22.98■■□□□ 1.27
ATPAF2-201ENST00000444058 MAST2Q6P0Q8 1798 aa22.98■■□□□ 1.27
ATPAF2-201ENST00000444058 CCL15-CCL14A0A0B4J2E2 113 aa22.97■■□□□ 1.27
ATPAF2-201ENST00000444058 PHF20L1A8MW92 1017 aa22.97■■□□□ 1.27
ATPAF2-201ENST00000444058 IRF6O14896 467 aa22.97■■□□□ 1.27
ATPAF2-201ENST00000444058 FKTNO75072 461 aa22.97■■□□□ 1.27
ATPAF2-201ENST00000444058 IFIT2P09913 472 aaKnown RBP22.97■■□□□ 1.27
ATPAF2-201ENST00000444058 CCL15Q16663 113 aa22.97■■□□□ 1.27
ATPAF2-201ENST00000444058 CERS3Q8IU89 383 aa22.97■■□□□ 1.27
ATPAF2-201ENST00000444058 R3HDMLQ9H3Y0 253 aa22.97■■□□□ 1.27
ATPAF2-201ENST00000444058 ZCCHC17Q9NP64 241 aaKnown RBP22.97■■□□□ 1.27
ATPAF2-201ENST00000444058 PKN2Q16513 984 aaKnown RBP22.96■■□□□ 1.27
ATPAF2-201ENST00000444058 TEX11Q8IYF3 940 aa22.96■■□□□ 1.27
ATPAF2-201ENST00000444058 OSBPL5Q9H0X9 879 aaPredicted RBP22.96■■□□□ 1.27
ATPAF2-201ENST00000444058 AATFQ9NY61 560 aaKnown RBP eCLIP22.96■■□□□ 1.27
ATPAF2-201ENST00000444058 AK9Q5TCS8 1911 aa22.96■■□□□ 1.27
ATPAF2-201ENST00000444058 APBB1O00213 710 aa22.95■■□□□ 1.26
ATPAF2-201ENST00000444058 IDH1O75874 414 aaKnown RBP22.95■■□□□ 1.26
ATPAF2-201ENST00000444058 MAP3K12Q12852 859 aa22.95■■□□□ 1.26
ATPAF2-201ENST00000444058 TTF1Q15361 905 aaPredicted RBP22.95■■□□□ 1.26
ATPAF2-201ENST00000444058 ADGRA1Q86SQ6 560 aa22.95■■□□□ 1.26
ATPAF2-201ENST00000444058 SH3RF3Q8TEJ3 882 aaPredicted RBP22.95■■□□□ 1.26
ATPAF2-201ENST00000444058 DOCK2Q92608 1830 aa22.95■■□□□ 1.26
ATPAF2-201ENST00000444058 KCNH4Q9UQ05 1017 aa22.95■■□□□ 1.26
ATPAF2-201ENST00000444058 CTNND1O60716 968 aaKnown RBP22.94■■□□□ 1.26
ATPAF2-201ENST00000444058 CRHR2Q13324 411 aa22.94■■□□□ 1.26
ATPAF2-201ENST00000444058 SCYL3Q8IZE3 742 aa22.94■■□□□ 1.26
ATPAF2-201ENST00000444058 DHX36Q9H2U1 1008 aaKnown RBP22.94■■□□□ 1.26
ATPAF2-201ENST00000444058 CYP7A1P22680 504 aa22.93■■□□□ 1.26
ATPAF2-201ENST00000444058 LRRCC1Q9C099 1032 aa22.93■■□□□ 1.26
ATPAF2-201ENST00000444058 ANTXR1Q9H6X2 564 aa22.93■■□□□ 1.26
ATPAF2-201ENST00000444058 CXCL11O14625 94 aa22.92■■□□□ 1.26
ATPAF2-201ENST00000444058 RRP1P56182 461 aaKnown RBP22.92■■□□□ 1.26
ATPAF2-201ENST00000444058 PICK1Q9NRD5 415 aa22.92■■□□□ 1.26
ATPAF2-201ENST00000444058 FAM43AQ8N2R8 423 aa22.91■■□□□ 1.26
ATPAF2-201ENST00000444058 MAGEB6Q8N7X4 407 aa22.91■■□□□ 1.26
ATPAF2-201ENST00000444058 DCTPP1Q9H773 170 aa22.91■■□□□ 1.26
ATPAF2-201ENST00000444058 ZFYVE28Q9HCC9 887 aa22.91■■□□□ 1.26
ATPAF2-201ENST00000444058 PI4KBQ9UBF8 816 aa22.91■■□□□ 1.26
ATPAF2-201ENST00000444058 HERC5Q9UII4 1024 aaKnown RBP22.91■■□□□ 1.26
ATPAF2-201ENST00000444058 NDUFB9Q9Y6M9 179 aa22.91■■□□□ 1.26
ATPAF2-201ENST00000444058 PTPRAP18433 802 aa22.9■■□□□ 1.26
ATPAF2-201ENST00000444058 ATP5JP18859 108 aa22.9■■□□□ 1.26
ATPAF2-201ENST00000444058 TAF1CQ15572 869 aaPredicted RBP22.9■■□□□ 1.26
ATPAF2-201ENST00000444058 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.9■■□□□ 1.26
ATPAF2-201ENST00000444058 FLT1P17948 1338 aa22.89■■□□□ 1.26
ATPAF2-201ENST00000444058 BTBD19C9JJ37 291 aa22.89■■□□□ 1.25
ATPAF2-201ENST00000444058 ANKRD23Q86SG2 305 aa22.89■■□□□ 1.25
ATPAF2-201ENST00000444058 TGFBRAP1Q8WUH2 860 aa22.89■■□□□ 1.25
ATPAF2-201ENST00000444058 ERO1AQ96HE7 468 aa22.89■■□□□ 1.25
ATPAF2-201ENST00000444058 ZHX2Q9Y6X8 837 aa22.89■■□□□ 1.25
ATPAF2-201ENST00000444058 MYO5AQ9Y4I1 1855 aaKnown RBP22.88■■□□□ 1.25
ATPAF2-201ENST00000444058 CCDC85CA6NKD9 419 aa22.88■■□□□ 1.25
ATPAF2-201ENST00000444058 METTL16Q86W50 562 aaKnown RBP22.88■■□□□ 1.25
ATPAF2-201ENST00000444058 FOXP4Q8IVH2 680 aaPredicted RBP22.88■■□□□ 1.25
ATPAF2-201ENST00000444058 YTHDC1Q96MU7 727 aaKnown RBP22.88■■□□□ 1.25
ATPAF2-201ENST00000444058 SP3Q02447 781 aa22.87■■□□□ 1.25
ATPAF2-201ENST00000444058 MAPKAPK5Q8IW41 473 aa22.87■■□□□ 1.25
ATPAF2-201ENST00000444058 AFG3L2Q9Y4W6 797 aa22.87■■□□□ 1.25
ATPAF2-201ENST00000444058 GOLIM4O00461 696 aa22.86■■□□□ 1.25
ATPAF2-201ENST00000444058 TLR2O60603 784 aa22.86■■□□□ 1.25
ATPAF2-201ENST00000444058 SLURP2P0DP57 97 aa22.86■■□□□ 1.25
ATPAF2-201ENST00000444058 DYNLL1P63167 89 aaKnown RBP22.86■■□□□ 1.25
ATPAF2-201ENST00000444058 MOGSQ13724 837 aa22.86■■□□□ 1.25
ATPAF2-201ENST00000444058 SLC9C2Q5TAH2 1124 aa22.86■■□□□ 1.25
ATPAF2-201ENST00000444058 FBXO46Q6PJ61 603 aaPredicted RBP22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms