RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 SPDYE5A6NIY4 337 aa25.71■■□□□ 1.71
CDKN3-204ENST00000442975 IGF2BP3O00425 579 aaKnown RBP eCLIP25.71■■□□□ 1.71
CDKN3-204ENST00000442975 TEX11Q8IYF3 940 aa25.71■■□□□ 1.71
CDKN3-204ENST00000442975 MYH2Q9UKX2 1941 aa25.71■■□□□ 1.71
CDKN3-204ENST00000442975 ALDH1A1P00352 501 aa25.7■■□□□ 1.7
CDKN3-204ENST00000442975 DGKZQ13574 1117 aa25.7■■□□□ 1.7
CDKN3-204ENST00000442975 SH3BP5LQ7L8J4 393 aa25.7■■□□□ 1.7
CDKN3-204ENST00000442975 AATFQ9NY61 560 aaKnown RBP eCLIP25.7■■□□□ 1.7
CDKN3-204ENST00000442975 MAST2Q6P0Q8 1798 aa25.69■■□□□ 1.7
CDKN3-204ENST00000442975 ERO1BQ86YB8 467 aa25.69■■□□□ 1.7
CDKN3-204ENST00000442975 SH3RF3Q8TEJ3 882 aaPredicted RBP25.69■■□□□ 1.7
CDKN3-204ENST00000442975 ABHD8Q96I13 439 aa25.69■■□□□ 1.7
CDKN3-204ENST00000442975 MCOLN1Q9GZU1 580 aa25.69■■□□□ 1.7
CDKN3-204ENST00000442975 ATRNL1Q5VV63 1379 aa25.69■■□□□ 1.7
CDKN3-204ENST00000442975 CCL15-CCL14A0A0B4J2E2 113 aa25.68■■□□□ 1.7
CDKN3-204ENST00000442975 DDTLA6NHG4 134 aaPredicted RBP25.68■■□□□ 1.7
CDKN3-204ENST00000442975 BAG3O95817 575 aa25.68■■□□□ 1.7
CDKN3-204ENST00000442975 CCL15Q16663 113 aa25.68■■□□□ 1.7
CDKN3-204ENST00000442975 OTUD7BQ6GQQ9 843 aa25.68■■□□□ 1.7
CDKN3-204ENST00000442975 ADGRA1Q86SQ6 560 aa25.68■■□□□ 1.7
CDKN3-204ENST00000442975 AKAP11Q9UKA4 1901 aa25.67■■□□□ 1.7
CDKN3-204ENST00000442975 MAP4K4O95819 1239 aaPredicted RBP25.67■■□□□ 1.7
CDKN3-204ENST00000442975 GTF2A2P52657 109 aa25.67■■□□□ 1.7
CDKN3-204ENST00000442975 ZNF296Q8WUU4 475 aaPredicted RBP25.67■■□□□ 1.7
CDKN3-204ENST00000442975 BRI3BPQ8WY22 251 aa25.67■■□□□ 1.7
CDKN3-204ENST00000442975 R3HDMLQ9H3Y0 253 aa25.67■■□□□ 1.7
CDKN3-204ENST00000442975 ANTXR1Q9H6X2 564 aa25.67■■□□□ 1.7
CDKN3-204ENST00000442975 GPR25O00155 361 aa25.66■■□□□ 1.7
CDKN3-204ENST00000442975 PLCG2P16885 1265 aa25.66■■□□□ 1.7
CDKN3-204ENST00000442975 CYP7A1P22680 504 aa25.66■■□□□ 1.7
CDKN3-204ENST00000442975 MS4A4AQ96JQ5 239 aa25.66■■□□□ 1.7
CDKN3-204ENST00000442975 DNAJC2Q99543 621 aaKnown RBP25.66■■□□□ 1.7
CDKN3-204ENST00000442975 OSBPL5Q9H0X9 879 aaPredicted RBP25.66■■□□□ 1.7
CDKN3-204ENST00000442975 ZNF112Q9UJU3 913 aa25.66■■□□□ 1.7
CDKN3-204ENST00000442975 SLURP2P0DP57 97 aa25.65■■□□□ 1.7
CDKN3-204ENST00000442975 PPIL2Q13356 520 aa25.65■■□□□ 1.7
CDKN3-204ENST00000442975 MAGEB6Q8N7X4 407 aa25.65■■□□□ 1.7
CDKN3-204ENST00000442975 PTPN18Q99952 460 aa25.65■■□□□ 1.7
CDKN3-204ENST00000442975 LRRCC1Q9C099 1032 aa25.65■■□□□ 1.7
CDKN3-204ENST00000442975 TESPA1A2RU30 521 aaPredicted RBP25.64■■□□□ 1.7
CDKN3-204ENST00000442975 IRF6O14896 467 aa25.64■■□□□ 1.7
CDKN3-204ENST00000442975 MAP3K12Q12852 859 aa25.64■■□□□ 1.7
CDKN3-204ENST00000442975 SNAPC2Q13487 334 aa25.64■■□□□ 1.7
CDKN3-204ENST00000442975 MIGA1Q8NAN2 632 aa25.64■■□□□ 1.7
CDKN3-204ENST00000442975 CFHR5Q9BXR6 569 aa25.64■■□□□ 1.7
CDKN3-204ENST00000442975 CASP8AP2Q9UKL3 1982 aa25.64■■□□□ 1.69
CDKN3-204ENST00000442975 FAM196BA6NMK8 535 aa25.63■■□□□ 1.69
CDKN3-204ENST00000442975 SMARCA5O60264 1052 aaPredicted RBP25.63■■□□□ 1.69
CDKN3-204ENST00000442975 NPM3O75607 178 aaKnown RBP25.63■■□□□ 1.69
CDKN3-204ENST00000442975 CRHR2Q13324 411 aa25.63■■□□□ 1.69
CDKN3-204ENST00000442975 NOL9Q5SY16 702 aaKnown RBP25.63■■□□□ 1.69
CDKN3-204ENST00000442975 CTU1Q7Z7A3 348 aaKnown RBP25.63■■□□□ 1.69
CDKN3-204ENST00000442975 MAPKAPK5Q8IW41 473 aa25.63■■□□□ 1.69
CDKN3-204ENST00000442975 PICK1Q9NRD5 415 aa25.63■■□□□ 1.69
CDKN3-204ENST00000442975 GOLIM4O00461 696 aa25.62■■□□□ 1.69
CDKN3-204ENST00000442975 IGSF3O75054 1194 aa25.62■■□□□ 1.69
CDKN3-204ENST00000442975 CETPP11597 493 aa25.62■■□□□ 1.69
CDKN3-204ENST00000442975 PPATQ06203 517 aa25.62■■□□□ 1.69
CDKN3-204ENST00000442975 TGFBRAP1Q8WUH2 860 aa25.62■■□□□ 1.69
CDKN3-204ENST00000442975 DOCK2Q92608 1830 aa25.62■■□□□ 1.69
CDKN3-204ENST00000442975 FLT1P17948 1338 aa25.62■■□□□ 1.69
CDKN3-204ENST00000442975 COL2A1P02458 1487 aaPredicted RBP25.61■■□□□ 1.69
CDKN3-204ENST00000442975 PHF20L1A8MW92 1017 aa25.61■■□□□ 1.69
CDKN3-204ENST00000442975 FKTNO75072 461 aa25.61■■□□□ 1.69
CDKN3-204ENST00000442975 PPP4CP60510 307 aa25.61■■□□□ 1.69
CDKN3-204ENST00000442975 DYNLL1P63167 89 aaKnown RBP25.61■■□□□ 1.69
CDKN3-204ENST00000442975 TTF1Q15361 905 aaPredicted RBP25.61■■□□□ 1.69
CDKN3-204ENST00000442975 SCYL3Q8IZE3 742 aa25.61■■□□□ 1.69
CDKN3-204ENST00000442975 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.61■■□□□ 1.69
CDKN3-204ENST00000442975 TAF1CQ15572 869 aaPredicted RBP25.6■■□□□ 1.69
CDKN3-204ENST00000442975 NOM1Q5C9Z4 860 aaKnown RBP25.6■■□□□ 1.69
CDKN3-204ENST00000442975 FAM43AQ8N2R8 423 aa25.6■■□□□ 1.69
CDKN3-204ENST00000442975 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.6■■□□□ 1.69
CDKN3-204ENST00000442975 CRBNQ96SW2 442 aa25.6■■□□□ 1.69
CDKN3-204ENST00000442975 CCDC85CA6NKD9 419 aa25.59■■□□□ 1.69
CDKN3-204ENST00000442975 BOLA2Q9H3K6 86 aa25.59■■□□□ 1.69
CDKN3-204ENST00000442975 EDC3Q96F86 508 aaKnown RBP25.58■■□□□ 1.69
CDKN3-204ENST00000442975 SAP30BPQ9UHR5 308 aaKnown RBP25.58■■□□□ 1.69
CDKN3-204ENST00000442975 PCDHB15Q9Y5E8 787 aa25.58■■□□□ 1.69
CDKN3-204ENST00000442975 AK9Q5TCS8 1911 aa25.57■■□□□ 1.68
CDKN3-204ENST00000442975 BTBD19C9JJ37 291 aa25.57■■□□□ 1.68
CDKN3-204ENST00000442975 MAP3K10Q02779 954 aa25.57■■□□□ 1.68
CDKN3-204ENST00000442975 SLC4A8Q2Y0W8 1093 aa25.57■■□□□ 1.68
CDKN3-204ENST00000442975 TRIM34Q9BYJ4 488 aa25.57■■□□□ 1.68
CDKN3-204ENST00000442975 ZHX2Q9Y6X8 837 aa25.57■■□□□ 1.68
CDKN3-204ENST00000442975 LAMB1P07942 1786 aa25.56■■□□□ 1.68
CDKN3-204ENST00000442975 PDE6AP16499 860 aa25.56■■□□□ 1.68
CDKN3-204ENST00000442975 USP5P45974 858 aa25.56■■□□□ 1.68
CDKN3-204ENST00000442975 SLC9C2Q5TAH2 1124 aa25.56■■□□□ 1.68
CDKN3-204ENST00000442975 CERS3Q8IU89 383 aa25.56■■□□□ 1.68
CDKN3-204ENST00000442975 DCTPP1Q9H773 170 aa25.56■■□□□ 1.68
CDKN3-204ENST00000442975 ZFYVE28Q9HCC9 887 aa25.56■■□□□ 1.68
CDKN3-204ENST00000442975 PAG1Q9NWQ8 432 aa25.56■■□□□ 1.68
CDKN3-204ENST00000442975 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.56■■□□□ 1.68
CDKN3-204ENST00000442975 KCNH4Q9UQ05 1017 aa25.56■■□□□ 1.68
CDKN3-204ENST00000442975 TBC1D12O60347 775 aa25.55■■□□□ 1.68
CDKN3-204ENST00000442975 CTNND1O60716 968 aaKnown RBP25.55■■□□□ 1.68
CDKN3-204ENST00000442975 PTPRAP18433 802 aa25.55■■□□□ 1.68
CDKN3-204ENST00000442975 ATP5JP18859 108 aa25.55■■□□□ 1.68
CDKN3-204ENST00000442975 DHX36Q9H2U1 1008 aaKnown RBP25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms