RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 TRIM75PA6NK02 468 aa11.52□□□□□ -0.57
LIN54-202ENST00000442461 RGS16O15492 202 aaPredicted RBP11.52□□□□□ -0.57
LIN54-202ENST00000442461 SUN1O94901 812 aa11.52□□□□□ -0.57
LIN54-202ENST00000442461 MAGEA1P43355 309 aa11.52□□□□□ -0.57
LIN54-202ENST00000442461 SESN3P58005 492 aa11.52□□□□□ -0.57
LIN54-202ENST00000442461 NAIF1Q69YI7 327 aaPredicted RBP11.52□□□□□ -0.57
LIN54-202ENST00000442461 CCDC62Q6P9F0 684 aa11.52□□□□□ -0.57
LIN54-202ENST00000442461 C11orf57Q6ZUT1 292 aaPredicted RBP11.52□□□□□ -0.57
LIN54-202ENST00000442461 KLHL7Q8IXQ5 586 aa11.52□□□□□ -0.57
LIN54-202ENST00000442461 TRMT2AQ8IZ69 625 aaKnown RBP11.52□□□□□ -0.57
LIN54-202ENST00000442461 C8orf58Q8NAV2 365 aa11.52□□□□□ -0.57
LIN54-202ENST00000442461 JPH4Q96JJ6 628 aa11.52□□□□□ -0.57
LIN54-202ENST00000442461 TSPYL2Q9H2G4 693 aaPredicted RBP11.52□□□□□ -0.57
LIN54-202ENST00000442461 USP27XA6NNY8 438 aa11.51□□□□□ -0.57
LIN54-202ENST00000442461 NR1D1P20393 614 aa11.51□□□□□ -0.57
LIN54-202ENST00000442461 HAND2P61296 217 aa11.51□□□□□ -0.57
LIN54-202ENST00000442461 OR8K1Q8NGG5 319 aa11.51□□□□□ -0.57
LIN54-202ENST00000442461 DTNBP1Q96EV8 351 aa11.51□□□□□ -0.57
LIN54-202ENST00000442461 MEFVO15553 781 aaPredicted RBP11.51□□□□□ -0.57
LIN54-202ENST00000442461 CUL3Q13618 768 aa11.51□□□□□ -0.57
LIN54-202ENST00000442461 SSH2Q76I76 1423 aa11.51□□□□□ -0.57
LIN54-202ENST00000442461 HAUS1Q96CS2 278 aa11.51□□□□□ -0.57
LIN54-202ENST00000442461 NUP58Q9BVL2 599 aa11.51□□□□□ -0.57
LIN54-202ENST00000442461 PPP1R9AQ9ULJ8 1098 aa11.51□□□□□ -0.57
LIN54-202ENST00000442461 SYNRGQ9UMZ2 1314 aa11.51□□□□□ -0.57
LIN54-202ENST00000442461 CCDC194A0A1B0GVG4 234 aa11.51□□□□□ -0.57
LIN54-202ENST00000442461 IDH1O75874 414 aaKnown RBP11.51□□□□□ -0.57
LIN54-202ENST00000442461 SEPT2Q15019 361 aa11.51□□□□□ -0.57
LIN54-202ENST00000442461 PLA2G4DQ86XP0 818 aa11.51□□□□□ -0.57
LIN54-202ENST00000442461 CCDC144CPQ8IYA2 1237 aa11.51□□□□□ -0.57
LIN54-202ENST00000442461 KLHDC4Q8TBB5 520 aa11.51□□□□□ -0.57
LIN54-202ENST00000442461 RAB34Q9BZG1 259 aa11.51□□□□□ -0.57
LIN54-202ENST00000442461 FANCLQ9NW38 375 aa11.51□□□□□ -0.57
LIN54-202ENST00000442461 BICDL2A1A5D9 508 aa11.5□□□□□ -0.57
LIN54-202ENST00000442461 RASSF10A6NK89 507 aa11.5□□□□□ -0.57
LIN54-202ENST00000442461 ZMYND10O75800 440 aa11.5□□□□□ -0.57
LIN54-202ENST00000442461 STAT6P42226 847 aa11.5□□□□□ -0.57
LIN54-202ENST00000442461 TMED1Q13445 227 aa11.5□□□□□ -0.57
LIN54-202ENST00000442461 ME3Q16798 604 aa11.5□□□□□ -0.57
LIN54-202ENST00000442461 TMEM67Q5HYA8 995 aa11.5□□□□□ -0.57
LIN54-202ENST00000442461 TCERG1LQ5VWI1 586 aa11.5□□□□□ -0.57
LIN54-202ENST00000442461 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.5□□□□□ -0.57
LIN54-202ENST00000442461 HYOU1Q9Y4L1 999 aa11.5□□□□□ -0.57
LIN54-202ENST00000442461 PTPRKQ15262 1439 aa11.5□□□□□ -0.57
LIN54-202ENST00000442461 ZBTB43O43298 467 aa11.5□□□□□ -0.57
LIN54-202ENST00000442461 MCMDC2Q4G0Z9 681 aa11.5□□□□□ -0.57
LIN54-202ENST00000442461 TBC1D1Q86TI0 1168 aaPredicted RBP11.5□□□□□ -0.57
LIN54-202ENST00000442461 IQUBQ8NA54 791 aa11.5□□□□□ -0.57
LIN54-202ENST00000442461 NAPBQ9H115 298 aa11.5□□□□□ -0.57
LIN54-202ENST00000442461 ATAD2BQ9ULI0 1458 aa11.5□□□□□ -0.57
LIN54-202ENST00000442461 ATP2A1O14983 1001 aa11.5□□□□□ -0.57
LIN54-202ENST00000442461 ARID5AQ03989 594 aa11.5□□□□□ -0.57
LIN54-202ENST00000442461 CCDC144BQ3MJ40 725 aa11.5□□□□□ -0.57
LIN54-202ENST00000442461 TSPYL6Q8N831 410 aa11.5□□□□□ -0.57
LIN54-202ENST00000442461 PRAM1Q96QH2 718 aa11.5□□□□□ -0.57
LIN54-202ENST00000442461 MLECQ14165 292 aa11.49□□□□□ -0.57
LIN54-202ENST00000442461 SUGP1Q8IWZ8 645 aaKnown RBP11.49□□□□□ -0.57
LIN54-202ENST00000442461 FBXO41Q8TF61 875 aa11.49□□□□□ -0.57
LIN54-202ENST00000442461 THOC1Q96FV9 657 aaKnown RBP11.49□□□□□ -0.57
LIN54-202ENST00000442461 EPC1Q9H2F5 836 aa11.49□□□□□ -0.57
LIN54-202ENST00000442461 AOX1Q06278 1338 aa11.49□□□□□ -0.57
LIN54-202ENST00000442461 IKBKBO14920 756 aa11.49□□□□□ -0.57
LIN54-202ENST00000442461 CUTAO60888 179 aa11.49□□□□□ -0.57
LIN54-202ENST00000442461 POTEJP0CG39 1038 aa11.49□□□□□ -0.57
LIN54-202ENST00000442461 PLA2G4AP47712 749 aa11.49□□□□□ -0.57
LIN54-202ENST00000442461 RRS1Q15050 365 aaKnown RBP11.49□□□□□ -0.57
LIN54-202ENST00000442461 DENND2CQ68D51 928 aa11.49□□□□□ -0.57
LIN54-202ENST00000442461 MORC4Q8TE76 937 aa11.49□□□□□ -0.57
LIN54-202ENST00000442461 CHCHD3Q9NX63 227 aaKnown RBP11.49□□□□□ -0.57
LIN54-202ENST00000442461 PAIP2BQ9ULR5 123 aaKnown RBP11.49□□□□□ -0.57
LIN54-202ENST00000442461 SOS1Q07889 1333 aaPredicted RBP11.49□□□□□ -0.57
LIN54-202ENST00000442461 SCAF11Q99590 1463 aaKnown RBP11.49□□□□□ -0.57
LIN54-202ENST00000442461 TRMT44Q8IYL2 757 aaKnown RBP11.49□□□□□ -0.57
LIN54-202ENST00000442461 P3H4Q92791 437 aa11.49□□□□□ -0.57
LIN54-202ENST00000442461 CALML4Q96GE6 196 aa11.49□□□□□ -0.57
LIN54-202ENST00000442461 USP28Q96RU2 1077 aa11.49□□□□□ -0.57
LIN54-202ENST00000442461 TRIM31Q9BZY9 425 aa11.49□□□□□ -0.57
LIN54-202ENST00000442461 STRN4Q9NRL3 753 aa11.49□□□□□ -0.57
LIN54-202ENST00000442461 EPN1Q9Y6I3 576 aaPredicted RBP11.49□□□□□ -0.57
LIN54-202ENST00000442461 ABCC5O15440 1437 aa11.49□□□□□ -0.57
LIN54-202ENST00000442461 STX2P32856 288 aa11.49□□□□□ -0.57
LIN54-202ENST00000442461 SLC8A3P57103 927 aa11.49□□□□□ -0.57
LIN54-202ENST00000442461 ANKRD20A3Q5VUR7 823 aa11.49□□□□□ -0.57
LIN54-202ENST00000442461 JAK2O60674 1132 aa11.48□□□□□ -0.57
LIN54-202ENST00000442461 HINFPQ9BQA5 517 aa11.48□□□□□ -0.57
LIN54-202ENST00000442461 FAM167BQ9BTA0 163 aa11.48□□□□□ -0.57
LIN54-202ENST00000442461 OSBPL5Q9H0X9 879 aaPredicted RBP11.48□□□□□ -0.57
LIN54-202ENST00000442461 SLC27A2O14975 620 aa11.48□□□□□ -0.57
LIN54-202ENST00000442461 CTNND1O60716 968 aaKnown RBP11.48□□□□□ -0.57
LIN54-202ENST00000442461 ATP2A2P16615 1042 aaKnown RBP11.48□□□□□ -0.57
LIN54-202ENST00000442461 IRX4P78413 519 aa11.48□□□□□ -0.57
LIN54-202ENST00000442461 DRP2Q13474 957 aa11.48□□□□□ -0.57
LIN54-202ENST00000442461 EP400NLQ6ZTU2 488 aa11.48□□□□□ -0.57
LIN54-202ENST00000442461 GSDMBQ8TAX9 411 aa11.48□□□□□ -0.57
LIN54-202ENST00000442461 CDK19Q9BWU1 502 aa11.48□□□□□ -0.57
LIN54-202ENST00000442461 INTS9Q9NV88 658 aaKnown RBP11.48□□□□□ -0.57
LIN54-202ENST00000442461 THEGQ9P2T0 379 aa11.48□□□□□ -0.57
LIN54-202ENST00000442461 MTUS1Q9ULD2 1270 aa11.48□□□□□ -0.57
LIN54-202ENST00000442461 CNNM1Q9NRU3 951 aa11.48□□□□□ -0.57
LIN54-202ENST00000442461 TAB2Q9NYJ8 693 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms