RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 SUSD4Q5VX71 490 aa10.76□□□□□ -0.69
HDAC6-209ENST00000440653 CDC37L1Q7L3B6 337 aa10.76□□□□□ -0.69
HDAC6-209ENST00000440653 SLC51AQ86UW1 340 aa10.76□□□□□ -0.69
HDAC6-209ENST00000440653 SEC62Q99442 399 aaKnown RBP10.76□□□□□ -0.69
HDAC6-209ENST00000440653 MTMR6Q9Y217 621 aa10.76□□□□□ -0.69
HDAC6-209ENST00000440653 NDUFB9Q9Y6M9 179 aa10.76□□□□□ -0.69
HDAC6-209ENST00000440653 PDS5AQ29RF7 1337 aaKnown RBP10.76□□□□□ -0.69
HDAC6-209ENST00000440653 SNED1Q8TER0 1413 aa10.75□□□□□ -0.69
HDAC6-209ENST00000440653 VPS37CA5D8V6 355 aaPredicted RBP10.75□□□□□ -0.69
HDAC6-209ENST00000440653 E7EWF7 191 aa10.75□□□□□ -0.69
HDAC6-209ENST00000440653 ZBTB22O15209 634 aa10.75□□□□□ -0.69
HDAC6-209ENST00000440653 NPHP1O15259 732 aa10.75□□□□□ -0.69
HDAC6-209ENST00000440653 GPAA1O43292 621 aa10.75□□□□□ -0.69
HDAC6-209ENST00000440653 PFKFB2O60825 505 aa10.75□□□□□ -0.69
HDAC6-209ENST00000440653 SLC10A3P09131 477 aa10.75□□□□□ -0.69
HDAC6-209ENST00000440653 ZAP70P43403 619 aa10.75□□□□□ -0.69
HDAC6-209ENST00000440653 ST5P78524 1137 aa10.75□□□□□ -0.69
HDAC6-209ENST00000440653 CCDC102BQ68D86 513 aa10.75□□□□□ -0.69
HDAC6-209ENST00000440653 Q6ZUG5 572 aa10.75□□□□□ -0.69
HDAC6-209ENST00000440653 RALYLQ86SE5 291 aaKnown RBP10.75□□□□□ -0.69
HDAC6-209ENST00000440653 GPT2Q8TD30 523 aa10.75□□□□□ -0.69
HDAC6-209ENST00000440653 TRPM4Q8TD43 1214 aa10.75□□□□□ -0.69
HDAC6-209ENST00000440653 CCDC85AQ96PX6 553 aaPredicted RBP10.75□□□□□ -0.69
HDAC6-209ENST00000440653 XRCC6P12956 609 aaKnown RBP eCLIP10.74□□□□□ -0.69
HDAC6-209ENST00000440653 NPR1P16066 1061 aa10.74□□□□□ -0.69
HDAC6-209ENST00000440653 GNAT2P19087 354 aa10.74□□□□□ -0.69
HDAC6-209ENST00000440653 CCDC173Q0VFZ6 552 aa10.74□□□□□ -0.69
HDAC6-209ENST00000440653 MAP3K12Q12852 859 aa10.74□□□□□ -0.69
HDAC6-209ENST00000440653 SF3B3Q15393 1217 aaKnown RBP10.74□□□□□ -0.69
HDAC6-209ENST00000440653 LARP1BQ659C4 914 aaKnown RBP10.74□□□□□ -0.69
HDAC6-209ENST00000440653 LRSAM1Q6UWE0 723 aa10.74□□□□□ -0.69
HDAC6-209ENST00000440653 FAM184AQ8NB25 1140 aa10.74□□□□□ -0.69
HDAC6-209ENST00000440653 OSBP2Q969R2 916 aa10.74□□□□□ -0.69
HDAC6-209ENST00000440653 ZNF274Q96GC6 653 aaPredicted RBP10.74□□□□□ -0.69
HDAC6-209ENST00000440653 SCAND2PQ9GZW5 306 aaPredicted RBP10.74□□□□□ -0.69
HDAC6-209ENST00000440653 GBA2Q9HCG7 927 aaPredicted RBP10.74□□□□□ -0.69
HDAC6-209ENST00000440653 LRRC37AA6NMS7 1700 aa10.74□□□□□ -0.69
HDAC6-209ENST00000440653 ZNF804BA4D1E1 1349 aa10.74□□□□□ -0.69
HDAC6-209ENST00000440653 VCANP13611 3396 aa10.73□□□□□ -0.69
HDAC6-209ENST00000440653 SHTN1A0MZ66 631 aa10.73□□□□□ -0.69
HDAC6-209ENST00000440653 GPR25O00155 361 aa10.73□□□□□ -0.69
HDAC6-209ENST00000440653 DHX16O60231 1041 aaKnown RBP10.73□□□□□ -0.69
HDAC6-209ENST00000440653 PDE6AP16499 860 aa10.73□□□□□ -0.69
HDAC6-209ENST00000440653 MCM5P33992 734 aa10.73□□□□□ -0.69
HDAC6-209ENST00000440653 NASPP49321 788 aaPredicted RBP10.73□□□□□ -0.69
HDAC6-209ENST00000440653 GMPSP49915 693 aaPredicted RBP10.73□□□□□ -0.69
HDAC6-209ENST00000440653 EVCP57679 992 aa10.73□□□□□ -0.69
HDAC6-209ENST00000440653 EXOSC10Q01780 885 aaKnown RBP10.73□□□□□ -0.69
HDAC6-209ENST00000440653 TRDNQ13061 729 aa10.73□□□□□ -0.69
HDAC6-209ENST00000440653 SCARF1Q14162 830 aa10.73□□□□□ -0.69
HDAC6-209ENST00000440653 CCDC183Q5T5S1 534 aa10.73□□□□□ -0.69
HDAC6-209ENST00000440653 NAA16Q6N069 864 aaPredicted RBP10.73□□□□□ -0.69
HDAC6-209ENST00000440653 STOX1Q6ZVD7 989 aa10.73□□□□□ -0.69
HDAC6-209ENST00000440653 LARGE2Q8N3Y3 721 aa10.73□□□□□ -0.69
HDAC6-209ENST00000440653 MPNDQ8N594 471 aa10.73□□□□□ -0.69
HDAC6-209ENST00000440653 SPATA5Q8NB90 893 aa10.73□□□□□ -0.69
HDAC6-209ENST00000440653 NCOA7Q8NI08 942 aa10.73□□□□□ -0.69
HDAC6-209ENST00000440653 SMARCC2Q8TAQ2 1214 aa10.73□□□□□ -0.69
HDAC6-209ENST00000440653 BRF1Q92994 677 aa10.73□□□□□ -0.69
HDAC6-209ENST00000440653 SETDB2Q96T68 719 aa10.73□□□□□ -0.69
HDAC6-209ENST00000440653 PSMD1Q99460 953 aa10.73□□□□□ -0.69
HDAC6-209ENST00000440653 ZSCAN16Q9H4T2 348 aaPredicted RBP10.73□□□□□ -0.69
HDAC6-209ENST00000440653 GNL3LQ9NVN8 582 aaKnown RBP10.73□□□□□ -0.69
HDAC6-209ENST00000440653 BRPF3Q9ULD4 1205 aa10.73□□□□□ -0.69
HDAC6-209ENST00000440653 SALL1Q9NSC2 1324 aa10.73□□□□□ -0.69
HDAC6-209ENST00000440653 NID2Q14112 1375 aa10.73□□□□□ -0.69
HDAC6-209ENST00000440653 SEMA3EO15041 775 aa10.72□□□□□ -0.69
HDAC6-209ENST00000440653 HCLS1P14317 486 aaPredicted RBP10.72□□□□□ -0.69
HDAC6-209ENST00000440653 PHKA1P46020 1223 aa10.72□□□□□ -0.69
HDAC6-209ENST00000440653 UBE4AQ14139 1066 aa10.72□□□□□ -0.69
HDAC6-209ENST00000440653 ALX1Q15699 326 aa10.72□□□□□ -0.69
HDAC6-209ENST00000440653 SLC9C2Q5TAH2 1124 aa10.72□□□□□ -0.69
HDAC6-209ENST00000440653 FOXD4L5Q5VV16 416 aaPredicted RBP10.72□□□□□ -0.69
HDAC6-209ENST00000440653 ATL3Q6DD88 541 aa10.72□□□□□ -0.69
HDAC6-209ENST00000440653 ANKRD18AQ8IVF6 992 aa10.72□□□□□ -0.69
HDAC6-209ENST00000440653 FAM43AQ8N2R8 423 aa10.72□□□□□ -0.69
HDAC6-209ENST00000440653 C2orf69Q8N8R5 385 aa10.72□□□□□ -0.69
HDAC6-209ENST00000440653 NECAB1Q8N987 351 aa10.72□□□□□ -0.69
HDAC6-209ENST00000440653 FOXD4L4Q8WXT5 416 aaPredicted RBP10.72□□□□□ -0.69
HDAC6-209ENST00000440653 R3HDMLQ9H3Y0 253 aa10.72□□□□□ -0.69
HDAC6-209ENST00000440653 TAF6LQ9Y6J9 622 aa10.72□□□□□ -0.69
HDAC6-209ENST00000440653 LAMA3Q16787 3333 aa10.71□□□□□ -0.69
HDAC6-209ENST00000440653 SOX1O00570 391 aaPredicted RBP10.71□□□□□ -0.69
HDAC6-209ENST00000440653 ZNF213O14771 459 aa10.71□□□□□ -0.69
HDAC6-209ENST00000440653 FIBPO43427 364 aa10.71□□□□□ -0.69
HDAC6-209ENST00000440653 IDH1O75874 414 aaKnown RBP10.71□□□□□ -0.69
HDAC6-209ENST00000440653 POLR2AP24928 1970 aaKnown RBP10.71□□□□□ -0.69
HDAC6-209ENST00000440653 RASGRF1Q13972 1273 aa10.71□□□□□ -0.69
HDAC6-209ENST00000440653 SLC10A5Q5PT55 438 aa10.71□□□□□ -0.69
HDAC6-209ENST00000440653 RBBP6Q7Z6E9 1792 aaKnown RBP10.71□□□□□ -0.69
HDAC6-209ENST00000440653 MB21D2Q8IYB1 491 aaPredicted RBP10.71□□□□□ -0.69
HDAC6-209ENST00000440653 ZC3H15Q8WU90 426 aaKnown RBP10.71□□□□□ -0.69
HDAC6-209ENST00000440653 TCEANC2Q96MN5 208 aa10.71□□□□□ -0.69
HDAC6-209ENST00000440653 MTA3Q9BTC8 594 aa10.71□□□□□ -0.69
HDAC6-209ENST00000440653 CNNM2Q9H8M5 875 aa10.71□□□□□ -0.69
HDAC6-209ENST00000440653 ZNF532Q9HCE3 1301 aa10.71□□□□□ -0.69
HDAC6-209ENST00000440653 BSDC1Q9NW68 430 aaPredicted RBP10.71□□□□□ -0.69
HDAC6-209ENST00000440653 TMEM63CQ9P1W3 806 aa10.71□□□□□ -0.69
HDAC6-209ENST00000440653 CNPY2Q9Y2B0 182 aa10.71□□□□□ -0.69
HDAC6-209ENST00000440653 NAV1Q8NEY1 1877 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms