RNA–Protein interactions for RNA: ENST00000440271.5

TRIM39-210, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-210ENST00000440271 ATP2B3Q16720 1220 aa25.72■■□□□ 1.71
TRIM39-210ENST00000440271 IDI2Q9BXS1 227 aa25.72■■□□□ 1.71
TRIM39-210ENST00000440271 MYH13Q9UKX3 1938 aa25.71■■□□□ 1.71
TRIM39-210ENST00000440271 ENTPD3O75355 529 aa25.71■■□□□ 1.71
TRIM39-210ENST00000440271 ELNP15502 786 aa25.71■■□□□ 1.71
TRIM39-210ENST00000440271 GADL1Q6ZQY3 521 aa25.71■■□□□ 1.71
TRIM39-210ENST00000440271 CEP126Q9P2H0 1117 aa25.71■■□□□ 1.71
TRIM39-210ENST00000440271 DENND2AQ9ULE3 1009 aa25.71■■□□□ 1.71
TRIM39-210ENST00000440271 SLC45A1Q9Y2W3 748 aa25.71■■□□□ 1.71
TRIM39-210ENST00000440271 ZNF521Q96K83 1311 aa25.7■■□□□ 1.71
TRIM39-210ENST00000440271 SH3BP5LQ7L8J4 393 aa25.7■■□□□ 1.7
TRIM39-210ENST00000440271 PXYLP1Q8TE99 480 aa25.7■■□□□ 1.7
TRIM39-210ENST00000440271 SSH1Q8WYL5 1049 aa25.7■■□□□ 1.7
TRIM39-210ENST00000440271 SIL1Q9H173 461 aa25.7■■□□□ 1.7
TRIM39-210ENST00000440271 MGAMO43451 1857 aa25.7■■□□□ 1.7
TRIM39-210ENST00000440271 TNPO2O14787 897 aaKnown RBP25.69■■□□□ 1.7
TRIM39-210ENST00000440271 SEMA3EO15041 775 aa25.69■■□□□ 1.7
TRIM39-210ENST00000440271 CIAO1O76071 339 aa25.69■■□□□ 1.7
TRIM39-210ENST00000440271 TFRCP02786 760 aaKnown RBP25.69■■□□□ 1.7
TRIM39-210ENST00000440271 INHAP05111 366 aa25.69■■□□□ 1.7
TRIM39-210ENST00000440271 MAP3K10Q02779 954 aa25.69■■□□□ 1.7
TRIM39-210ENST00000440271 FBXO3Q9UK99 471 aa25.69■■□□□ 1.7
TRIM39-210ENST00000440271 LRRFIP2Q9Y608 721 aaKnown RBP25.69■■□□□ 1.7
TRIM39-210ENST00000440271 EVI5O60447 810 aa25.68■■□□□ 1.7
TRIM39-210ENST00000440271 CAPN2P17655 700 aa25.68■■□□□ 1.7
TRIM39-210ENST00000440271 PHKA1P46020 1223 aa25.68■■□□□ 1.7
TRIM39-210ENST00000440271 IRF5Q13568 498 aa25.68■■□□□ 1.7
TRIM39-210ENST00000440271 ZSCAN29Q8IWY8 852 aaPredicted RBP25.68■■□□□ 1.7
TRIM39-210ENST00000440271 DEFB118Q96PH6 123 aa25.68■■□□□ 1.7
TRIM39-210ENST00000440271 SLURP2P0DP57 97 aa25.67■■□□□ 1.7
TRIM39-210ENST00000440271 SMCR8Q8TEV9 937 aaPredicted RBP25.67■■□□□ 1.7
TRIM39-210ENST00000440271 GAKO14976 1311 aa25.66■■□□□ 1.7
TRIM39-210ENST00000440271 DDTLA6NHG4 134 aaPredicted RBP25.66■■□□□ 1.7
TRIM39-210ENST00000440271 CTNND1O60716 968 aaKnown RBP25.66■■□□□ 1.7
TRIM39-210ENST00000440271 A0A1W2PPC1 479 aa25.65■■□□□ 1.7
TRIM39-210ENST00000440271 TRIM75PA6NK02 468 aa25.65■■□□□ 1.7
TRIM39-210ENST00000440271 ZGPATQ8N5A5 531 aaKnown RBP25.65■■□□□ 1.7
TRIM39-210ENST00000440271 PAK6Q9NQU5 681 aaPredicted RBP25.65■■□□□ 1.7
TRIM39-210ENST00000440271 ZBTB22O15209 634 aa25.64■■□□□ 1.7
TRIM39-210ENST00000440271 CCDC102BQ68D86 513 aa25.64■■□□□ 1.7
TRIM39-210ENST00000440271 DDX4Q9NQI0 724 aaKnown RBP25.64■■□□□ 1.7
TRIM39-210ENST00000440271 RFX7Q2KHR2 1363 aa25.64■■□□□ 1.69
TRIM39-210ENST00000440271 UBTFL1P0CB47 393 aaPredicted RBP25.63■■□□□ 1.69
TRIM39-210ENST00000440271 ADORA1P30542 326 aa25.63■■□□□ 1.69
TRIM39-210ENST00000440271 IL15P40933 162 aaPredicted RBP25.63■■□□□ 1.69
TRIM39-210ENST00000440271 DZIP1Q86YF9 867 aaKnown RBP25.63■■□□□ 1.69
TRIM39-210ENST00000440271 ANKRD13CQ8N6S4 541 aa25.63■■□□□ 1.69
TRIM39-210ENST00000440271 COA7Q96BR5 231 aa25.63■■□□□ 1.69
TRIM39-210ENST00000440271 FAM163AQ96GL9 167 aaPredicted RBP25.63■■□□□ 1.69
TRIM39-210ENST00000440271 CRISPLD2Q9H0B8 497 aa25.63■■□□□ 1.69
TRIM39-210ENST00000440271 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.63■■□□□ 1.69
TRIM39-210ENST00000440271 TAOK2Q9UL54 1235 aa25.63■■□□□ 1.69
TRIM39-210ENST00000440271 AGTPBP1Q9UPW5 1226 aa25.63■■□□□ 1.69
TRIM39-210ENST00000440271 DOCK2Q92608 1830 aa25.63■■□□□ 1.69
TRIM39-210ENST00000440271 PICALMQ13492 652 aa25.62■■□□□ 1.69
TRIM39-210ENST00000440271 CCDC84Q86UT8 332 aaPredicted RBP25.62■■□□□ 1.69
TRIM39-210ENST00000440271 SLF2Q8IX21 1173 aa25.62■■□□□ 1.69
TRIM39-210ENST00000440271 SLC17A8Q8NDX2 589 aa25.62■■□□□ 1.69
TRIM39-210ENST00000440271 PAWRQ96IZ0 340 aaKnown RBP25.62■■□□□ 1.69
TRIM39-210ENST00000440271 ABCF2Q9UG63 623 aa25.62■■□□□ 1.69
TRIM39-210ENST00000440271 STAP2Q9UGK3 403 aa25.62■■□□□ 1.69
TRIM39-210ENST00000440271 MYH2Q9UKX2 1941 aa25.61■■□□□ 1.69
TRIM39-210ENST00000440271 SOX1O00570 391 aaPredicted RBP25.61■■□□□ 1.69
TRIM39-210ENST00000440271 BTDP43251 543 aa25.61■■□□□ 1.69
TRIM39-210ENST00000440271 RASGRF1Q13972 1273 aa25.61■■□□□ 1.69
TRIM39-210ENST00000440271 PA2G4Q9UQ80 394 aaKnown RBP25.61■■□□□ 1.69
TRIM39-210ENST00000440271 E9PSI1 815 aa25.6■■□□□ 1.69
TRIM39-210ENST00000440271 TREML2Q5T2D2 321 aa25.6■■□□□ 1.69
TRIM39-210ENST00000440271 TBC1D12O60347 775 aa25.59■■□□□ 1.69
TRIM39-210ENST00000440271 FAM110CQ1W6H9 321 aa25.59■■□□□ 1.69
TRIM39-210ENST00000440271 ALDH1L2Q3SY69 923 aa25.59■■□□□ 1.69
TRIM39-210ENST00000440271 SPTY2D1Q68D10 685 aaPredicted RBP25.59■■□□□ 1.69
TRIM39-210ENST00000440271 LRCH3Q96II8 777 aa25.59■■□□□ 1.69
TRIM39-210ENST00000440271 PNMA3Q9UL41 463 aa25.59■■□□□ 1.69
TRIM39-210ENST00000440271 DLL1O00548 723 aa25.58■■□□□ 1.69
TRIM39-210ENST00000440271 TIMM10P62072 90 aa25.58■■□□□ 1.69
TRIM39-210ENST00000440271 NECAB2Q7Z6G3 386 aa25.58■■□□□ 1.69
TRIM39-210ENST00000440271 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.58■■□□□ 1.69
TRIM39-210ENST00000440271 PTPRFP10586 1907 aa25.58■■□□□ 1.69
TRIM39-210ENST00000440271 PDS5AQ29RF7 1337 aaKnown RBP25.58■■□□□ 1.69
TRIM39-210ENST00000440271 PHIPQ8WWQ0 1821 aa25.58■■□□□ 1.68
TRIM39-210ENST00000440271 GPR75-ASB3A0A0A6YYF3 556 aa25.57■■□□□ 1.68
TRIM39-210ENST00000440271 PROCA1Q8NCQ7 364 aaPredicted RBP25.57■■□□□ 1.68
TRIM39-210ENST00000440271 DIS3LQ8TF46 1054 aaKnown RBP25.57■■□□□ 1.68
TRIM39-210ENST00000440271 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.57■■□□□ 1.68
TRIM39-210ENST00000440271 COPRSQ9NQ92 184 aa25.57■■□□□ 1.68
TRIM39-210ENST00000440271 DOCK1Q14185 1865 aa25.57■■□□□ 1.68
TRIM39-210ENST00000440271 MROH7-TTC4A0A0A0MT08 1334 aa25.57■■□□□ 1.68
TRIM39-210ENST00000440271 DOCK3Q8IZD9 2030 aa25.56■■□□□ 1.68
TRIM39-210ENST00000440271 FAM196BA6NMK8 535 aa25.56■■□□□ 1.68
TRIM39-210ENST00000440271 RHBDL3P58872 404 aa25.56■■□□□ 1.68
TRIM39-210ENST00000440271 SPP2Q13103 211 aa25.56■■□□□ 1.68
TRIM39-210ENST00000440271 SMC4Q9NTJ3 1288 aa25.56■■□□□ 1.68
TRIM39-210ENST00000440271 NPM3O75607 178 aaKnown RBP25.55■■□□□ 1.68
TRIM39-210ENST00000440271 GCLCP48506 637 aaPredicted RBP25.55■■□□□ 1.68
TRIM39-210ENST00000440271 MECOMQ03112 1051 aa25.55■■□□□ 1.68
TRIM39-210ENST00000440271 SLFN5Q08AF3 891 aa25.55■■□□□ 1.68
TRIM39-210ENST00000440271 OSBPL5Q9H0X9 879 aaPredicted RBP25.55■■□□□ 1.68
TRIM39-210ENST00000440271 HDAC5Q9UQL6 1122 aa25.55■■□□□ 1.68
TRIM39-210ENST00000440271 HMGCRP04035 888 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms