RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 E9PSI1 815 aa5.91□□□□□ -1.46
VPS41-207ENST00000439468 PRPF40AO75400 957 aaKnown RBP5.91□□□□□ -1.46
VPS41-207ENST00000439468 MED26O95402 600 aa5.91□□□□□ -1.46
VPS41-207ENST00000439468 HCLS1P14317 486 aaPredicted RBP5.91□□□□□ -1.46
VPS41-207ENST00000439468 KIF4BQ2VIQ3 1234 aa5.91□□□□□ -1.46
VPS41-207ENST00000439468 ZNF326Q5BKZ1 582 aaKnown RBP5.91□□□□□ -1.46
VPS41-207ENST00000439468 DUSP27Q5VZP5 1158 aa5.91□□□□□ -1.46
VPS41-207ENST00000439468 KRTAP1-3Q8IUG1 177 aa5.91□□□□□ -1.46
VPS41-207ENST00000439468 GPBAR1Q8TDU6 330 aa5.91□□□□□ -1.46
VPS41-207ENST00000439468 FANCD2OSQ96PS1 177 aa5.91□□□□□ -1.46
VPS41-207ENST00000439468 DUSP9Q99956 384 aaKnown RBP5.91□□□□□ -1.46
VPS41-207ENST00000439468 ENC1O14682 589 aa5.9□□□□□ -1.46
VPS41-207ENST00000439468 CYP26A1O43174 497 aa5.9□□□□□ -1.46
VPS41-207ENST00000439468 PAGE1O75459 146 aa5.9□□□□□ -1.46
VPS41-207ENST00000439468 GNA15P30679 374 aa5.9□□□□□ -1.46
VPS41-207ENST00000439468 HOXA10P31260 410 aaPredicted RBP5.9□□□□□ -1.46
VPS41-207ENST00000439468 FGD1P98174 961 aa5.9□□□□□ -1.46
VPS41-207ENST00000439468 TTLL4Q14679 1199 aa5.9□□□□□ -1.46
VPS41-207ENST00000439468 LLGL2Q6P1M3 1020 aa5.9□□□□□ -1.46
VPS41-207ENST00000439468 SMYD4Q8IYR2 804 aaPredicted RBP5.9□□□□□ -1.46
VPS41-207ENST00000439468 GRIN3AQ8TCU5 1115 aa5.9□□□□□ -1.46
VPS41-207ENST00000439468 FRMD6Q96NE9 622 aa5.9□□□□□ -1.46
VPS41-207ENST00000439468 PARP2Q9UGN5 583 aa5.9□□□□□ -1.46
VPS41-207ENST00000439468 CSADQ9Y600 493 aa5.9□□□□□ -1.46
VPS41-207ENST00000439468 SYNGAP1Q96PV0 1343 aa5.9□□□□□ -1.47
VPS41-207ENST00000439468 KIAA1324LA8MWY0 1029 aaPredicted RBP5.89□□□□□ -1.47
VPS41-207ENST00000439468 DYNC1LI2O43237 492 aaPredicted RBP5.89□□□□□ -1.47
VPS41-207ENST00000439468 CELA3AP09093 270 aa5.89□□□□□ -1.47
VPS41-207ENST00000439468 LMNB1P20700 586 aa5.89□□□□□ -1.47
VPS41-207ENST00000439468 CYP27A1Q02318 531 aa5.89□□□□□ -1.47
VPS41-207ENST00000439468 CDK5R2Q13319 367 aa5.89□□□□□ -1.47
VPS41-207ENST00000439468 COL19A1Q14993 1142 aa5.89□□□□□ -1.47
VPS41-207ENST00000439468 LRRC14Q15048 493 aa5.89□□□□□ -1.47
VPS41-207ENST00000439468 CPSF6Q16630 551 aaKnown RBP eCLIP5.89□□□□□ -1.47
VPS41-207ENST00000439468 ZNF765Q7L2R6 523 aa5.89□□□□□ -1.47
VPS41-207ENST00000439468 GSX1Q9H4S2 264 aaPredicted RBP5.89□□□□□ -1.47
VPS41-207ENST00000439468 ANGEL1Q9UNK9 670 aaKnown RBP5.89□□□□□ -1.47
VPS41-207ENST00000439468 FOSL1P15407 271 aa5.88□□□□□ -1.47
VPS41-207ENST00000439468 PCNX4Q63HM2 1172 aa5.88□□□□□ -1.47
VPS41-207ENST00000439468 MPRIPQ6WCQ1 1025 aa5.88□□□□□ -1.47
VPS41-207ENST00000439468 DISC1Q9NRI5 854 aa5.88□□□□□ -1.47
VPS41-207ENST00000439468 PCDHA4Q9UN74 947 aa5.88□□□□□ -1.47
VPS41-207ENST00000439468 PCDHGC5Q9Y5F6 944 aa5.88□□□□□ -1.47
VPS41-207ENST00000439468 DCDC2CA8MYV0 355 aa5.87□□□□□ -1.47
VPS41-207ENST00000439468 TRIM37O94972 964 aa5.87□□□□□ -1.47
VPS41-207ENST00000439468 FAM87AP0C7U9 286 aa5.87□□□□□ -1.47
VPS41-207ENST00000439468 SPINK2P20155 84 aa5.87□□□□□ -1.47
VPS41-207ENST00000439468 BMP6P22004 513 aa5.87□□□□□ -1.47
VPS41-207ENST00000439468 XPCQ01831 940 aaPredicted RBP5.87□□□□□ -1.47
VPS41-207ENST00000439468 ZNF252P-AS1Q0IIN9 211 aa5.87□□□□□ -1.47
VPS41-207ENST00000439468 PSMD2Q13200 908 aa5.87□□□□□ -1.47
VPS41-207ENST00000439468 CCDC85BQ15834 202 aaPredicted RBP5.87□□□□□ -1.47
VPS41-207ENST00000439468 DTX1Q86Y01 620 aa5.87□□□□□ -1.47
VPS41-207ENST00000439468 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.87□□□□□ -1.47
VPS41-207ENST00000439468 ELMO3Q96BJ8 720 aa5.87□□□□□ -1.47
VPS41-207ENST00000439468 C1GALT1Q9NS00 363 aa5.87□□□□□ -1.47
VPS41-207ENST00000439468 PCOLCE2Q9UKZ9 415 aa5.87□□□□□ -1.47
VPS41-207ENST00000439468 WNT11O96014 354 aa5.86□□□□□ -1.47
VPS41-207ENST00000439468 GP2P55259 537 aaKnown RBP5.86□□□□□ -1.47
VPS41-207ENST00000439468 ERVK-24P63145 666 aa5.86□□□□□ -1.47
VPS41-207ENST00000439468 MAP3K11Q16584 847 aa5.86□□□□□ -1.47
VPS41-207ENST00000439468 CYP27C1Q4G0S4 372 aa5.86□□□□□ -1.47
VPS41-207ENST00000439468 ZC3H12AQ5D1E8 599 aaKnown RBP5.86□□□□□ -1.47
VPS41-207ENST00000439468 PPM1JQ5JR12 505 aa5.86□□□□□ -1.47
VPS41-207ENST00000439468 ARHGAP27Q6ZUM4 889 aa5.86□□□□□ -1.47
VPS41-207ENST00000439468 SV2BQ7L1I2 683 aa5.86□□□□□ -1.47
VPS41-207ENST00000439468 GATA6Q92908 595 aa5.86□□□□□ -1.47
VPS41-207ENST00000439468 ISL2Q96A47 359 aa5.86□□□□□ -1.47
VPS41-207ENST00000439468 CYP8B1Q9UNU6 501 aa5.86□□□□□ -1.47
VPS41-207ENST00000439468 AK5Q9Y6K8 562 aa5.86□□□□□ -1.47
VPS41-207ENST00000439468 PRAMEF27A3QJZ7 478 aa5.85□□□□□ -1.47
VPS41-207ENST00000439468 NEFMP07197 916 aa5.85□□□□□ -1.47
VPS41-207ENST00000439468 RANGAP1P46060 587 aaPredicted RBP5.85□□□□□ -1.47
VPS41-207ENST00000439468 DAB2P98082 770 aa5.85□□□□□ -1.47
VPS41-207ENST00000439468 TSNAXIP1Q2TAA8 658 aa5.85□□□□□ -1.47
VPS41-207ENST00000439468 LDLRAD1Q5T700 205 aa5.85□□□□□ -1.47
VPS41-207ENST00000439468 RASIP1Q5U651 963 aa5.85□□□□□ -1.47
VPS41-207ENST00000439468 TTBK2Q6IQ55 1244 aa5.85□□□□□ -1.47
VPS41-207ENST00000439468 OGFOD3Q6PK18 319 aa5.85□□□□□ -1.47
VPS41-207ENST00000439468 SEZ6L2Q6UXD5 910 aa5.85□□□□□ -1.47
VPS41-207ENST00000439468 C12orf40Q86WS4 652 aa5.85□□□□□ -1.47
VPS41-207ENST00000439468 RNF214Q8ND24 703 aa5.85□□□□□ -1.47
VPS41-207ENST00000439468 BACH2Q9BYV9 841 aa5.85□□□□□ -1.47
VPS41-207ENST00000439468 ADAMTS4O75173 837 aa5.84□□□□□ -1.47
VPS41-207ENST00000439468 RECKO95980 971 aa5.84□□□□□ -1.47
VPS41-207ENST00000439468 IRAK1P51617 712 aa5.84□□□□□ -1.47
VPS41-207ENST00000439468 MRPL58Q14197 206 aaKnown RBP5.84□□□□□ -1.47
VPS41-207ENST00000439468 CDC37L1Q7L3B6 337 aa5.84□□□□□ -1.47
VPS41-207ENST00000439468 TMC4Q7Z404 712 aa5.84□□□□□ -1.47
VPS41-207ENST00000439468 TOP6BLQ8N6T0 577 aa5.84□□□□□ -1.47
VPS41-207ENST00000439468 MRS2Q9HD23 443 aa5.84□□□□□ -1.47
VPS41-207ENST00000439468 OAS3Q9Y6K5 1087 aaKnown RBP5.84□□□□□ -1.47
VPS41-207ENST00000439468 MSMPQ1L6U9 139 aa5.83□□□□□ -1.48
VPS41-207ENST00000439468 VSIG10LQ86VR7 867 aa5.83□□□□□ -1.48
VPS41-207ENST00000439468 TP53INP2Q8IXH6 220 aa5.83□□□□□ -1.48
VPS41-207ENST00000439468 FAM181AQ8N9Y4 354 aa5.83□□□□□ -1.48
VPS41-207ENST00000439468 FLCNQ8NFG4 579 aa5.83□□□□□ -1.48
VPS41-207ENST00000439468 ANKRD24Q8TF21 1146 aa5.83□□□□□ -1.48
VPS41-207ENST00000439468 BSDC1Q9NW68 430 aaPredicted RBP5.83□□□□□ -1.48
VPS41-207ENST00000439468 ZC3H7BQ9UGR2 993 aaKnown RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms